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The map label for this gene is yedY [H]

Identifier: 148260753

GI number: 148260753

Start: 1940786

End: 1941763

Strand: Reverse

Name: yedY [H]

Synonym: Acry_1758

Alternate gene names: 148260753

Gene position: 1941763-1940786 (Counterclockwise)

Preceding gene: 148260755

Following gene: 148260750

Centisome position: 57.29

GC content: 64.42

Gene sequence:

>978_bases
ATGCACGTCATCCGCAAACCGGACTGGTCCCTGCCCGAAACGGAGGCGACCCCGCCGCATCTGGCGCTCGACCGCCGCGC
CGCCCTTGCCACGCTGGGCGGCGCCATGCTCGGCTTCGGCCAGATCGGCGCCGCCCTCGCCGACACCAACGCCAACGCGA
ACGCCAAACCGGGCGACCGCATCTCCGACTACCCGCCCTCCGCCGCGCGTTTCGACCCCGAGCGCAGCCTCACCCCGCGC
CACAATGTCGAGACCTACAACAATTTCTACGAATTCGGCCTGAACAAGGACATCTGGCGCAAGGCCCAGAAACTGCCCAC
CGAACCCTGGACCATCCGCATCGACGGCATGGTGGAAAAGCCCTTCACCATCTCCTTCGGCGACCTGATGAAGAAGGTCA
GCACCGAAACCCGCATCTACCGCCATCGCTGCGTCGAGGCCTGGTCCCTCGTCGTCCCCTGGGAAGGCTTTCCGCTCGCC
GATCTGGTGAAACTGGCCAAGCCGCTCTCGGGCGCGAAATATCTCCGCTTCACCACGCTGTCCGACCCGAAGGTGATGCC
CGGCCTGTCGATCCCGTTCTTCCCCTGGCCCTATCACGAGGGCCTGACCATGGCGGAGGCGACGAACGAACTCGCCTTCG
TCGGCACCGGCATGTACGGCGCGAAGATGCCCAGGCAGGATGGCGCGCCGATCCGCGTCGTGCTGCCCTGGAAATACGGC
TTCAAATCGGCGAAATCCCTCGTCCGCATCGAGTTCGTCAAGGAGCAGCCGGTTACCTTCTGGGAAAAGACCAGCCCGGA
CATGTACGGCTTCTGGGCCAATGTGAACCCGAAATACCCCACCCTCCGCTGGAGCCAGGCGCGCGAGCGCGTCATCGGCA
CCGGCGAGGTGGTGCCGACGCAAATCTACAACGGCTACGGCAAATGGGTGGCCCCGCTCTATGCCGGCATGAAGCAGGAC
AAGAAACTGTTCATGTGA

Upstream 100 bases:

>100_bases
TGCGGTCCCGAAGCTGTGAAGGGTGGTCCCGCGCGGGTCACGGCGGGTTGATGAATGGCCTGCGCGCACCAGAGTAATCT
ATCGCCCGAGGAGAACAACC

Downstream 100 bases:

>100_bases
CGACCAGCAGCCGGCGGGCGATGCCGATCACCCGCCGCGCCTCGCTCCACAATTCGTAGCGGTCGAACTCCGCCGCCCTG
ACCCAGGCGATGTCGGTCAC

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MHVIRKPDWSLPETEATPPHLALDRRAALATLGGAMLGFGQIGAALADTNANANAKPGDRISDYPPSAARFDPERSLTPR
HNVETYNNFYEFGLNKDIWRKAQKLPTEPWTIRIDGMVEKPFTISFGDLMKKVSTETRIYRHRCVEAWSLVVPWEGFPLA
DLVKLAKPLSGAKYLRFTTLSDPKVMPGLSIPFFPWPYHEGLTMAEATNELAFVGTGMYGAKMPRQDGAPIRVVLPWKYG
FKSAKSLVRIEFVKEQPVTFWEKTSPDMYGFWANVNPKYPTLRWSQARERVIGTGEVVPTQIYNGYGKWVAPLYAGMKQD
KKLFM

Sequences:

>Translated_325_residues
MHVIRKPDWSLPETEATPPHLALDRRAALATLGGAMLGFGQIGAALADTNANANAKPGDRISDYPPSAARFDPERSLTPR
HNVETYNNFYEFGLNKDIWRKAQKLPTEPWTIRIDGMVEKPFTISFGDLMKKVSTETRIYRHRCVEAWSLVVPWEGFPLA
DLVKLAKPLSGAKYLRFTTLSDPKVMPGLSIPFFPWPYHEGLTMAEATNELAFVGTGMYGAKMPRQDGAPIRVVLPWKYG
FKSAKSLVRIEFVKEQPVTFWEKTSPDMYGFWANVNPKYPTLRWSQARERVIGTGEVVPTQIYNGYGKWVAPLYAGMKQD
KKLFM
>Mature_325_residues
MHVIRKPDWSLPETEATPPHLALDRRAALATLGGAMLGFGQIGAALADTNANANAKPGDRISDYPPSAARFDPERSLTPR
HNVETYNNFYEFGLNKDIWRKAQKLPTEPWTIRIDGMVEKPFTISFGDLMKKVSTETRIYRHRCVEAWSLVVPWEGFPLA
DLVKLAKPLSGAKYLRFTTLSDPKVMPGLSIPFFPWPYHEGLTMAEATNELAFVGTGMYGAKMPRQDGAPIRVVLPWKYG
FKSAKSLVRIEFVKEQPVTFWEKTSPDMYGFWANVNPKYPTLRWSQARERVIGTGEVVPTQIYNGYGKWVAPLYAGMKQD
KKLFM

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=311, Percent_Identity=45.016077170418, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 36763; Mature: 36763

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVIRKPDWSLPETEATPPHLALDRRAALATLGGAMLGFGQIGAALADTNANANAKPGDR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ISDYPPSAARFDPERSLTPRHNVETYNNFYEFGLNKDIWRKAQKLPTEPWTIRIDGMVEK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCEECC
PFTISFGDLMKKVSTETRIYRHRCVEAWSLVVPWEGFPLADLVKLAKPLSGAKYLRFTTL
CEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEC
SDPKVMPGLSIPFFPWPYHEGLTMAEATNELAFVGTGMYGAKMPRQDGAPIRVVLPWKYG
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCC
FKSAKSLVRIEFVKEQPVTFWEKTSPDMYGFWANVNPKYPTLRWSQARERVIGTGEVVPT
CHHHHHEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCCH
QIYNGYGKWVAPLYAGMKQDKKLFM
HHHCCCCHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure
MHVIRKPDWSLPETEATPPHLALDRRAALATLGGAMLGFGQIGAALADTNANANAKPGDR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
ISDYPPSAARFDPERSLTPRHNVETYNNFYEFGLNKDIWRKAQKLPTEPWTIRIDGMVEK
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCEECC
PFTISFGDLMKKVSTETRIYRHRCVEAWSLVVPWEGFPLADLVKLAKPLSGAKYLRFTTL
CEEECHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEC
SDPKVMPGLSIPFFPWPYHEGLTMAEATNELAFVGTGMYGAKMPRQDGAPIRVVLPWKYG
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCC
FKSAKSLVRIEFVKEQPVTFWEKTSPDMYGFWANVNPKYPTLRWSQARERVIGTGEVVPT
CHHHHHEEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCCEEHHHHHHHHCCCCCCCCH
QIYNGYGKWVAPLYAGMKQDKKLFM
HHHCCCCHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA