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The map label for this gene is yhcM [H]

Identifier: 148260624

GI number: 148260624

Start: 1797082

End: 1798197

Strand: Reverse

Name: yhcM [H]

Synonym: Acry_1626

Alternate gene names: 148260624

Gene position: 1798197-1797082 (Counterclockwise)

Preceding gene: 148260625

Following gene: 148260623

Centisome position: 53.06

GC content: 69.53

Gene sequence:

>1116_bases
ATGTCCGCCTACCGGACGCGGATCGACGCCGGCACCATCCTGCCGGACCCGGTCCAGCGCCGGGCGGCGGAGCGCCTGCA
CGAGCTGTGGGGCCGGCTGCGCGACTACGATCCGCAGCCGAAGGCGCCGCCCAATGGCTGGCTCGGCCGGCTGCTCAACA
AGAAGCGGGTGGACGAGGTGCCGGAGGACTATCCCTCGGGCCTCTATCTCGTCGGCGAGGTCGGCCGCGGCAAGTCCATG
CTGATGGACCTGTTCTTCGCCGCCGCCGAGGTGCCGCGCAAGCGGCGGGTGCATTTTCACGAATTCATGCAGCAGGCCCA
TGCGAGGCTGCACAGGCTGCGCGCCGAGCGGCCCGATGCCGATGCGGTGCTCTCGCTCGCCGACATCATCGCCAGCGAAT
CGGCGCTGCTCTGCTTCGACGAGTTCCAGGTCCACGACATCGGCGATGCGATGATCCTGGCCCGGCTGTTCGAGGCGCTG
TTCGCCCGCGCCGTGGTCGTCGTCGCCACCTCCAACACGCTGCCCGACGATCTCTACCGCAACAAGCCGGGCTATGACAG
CTTCCGCCCCTTCATCGCCCTGCTCAAGCGCCATCTCGACGTGATGGTGCTCGATGGCGGGCGCGACTACCGGCGCGAGC
GGGTGCGCGGCGCGCGCAACTGGTACGTGCCGGCGGATGGCCGGGCCGAGCGCGCTCTCGATGATGTGTTCGCCGAACTC
ACCGGCGGTGCCGCCCCGCGCGCGGAGGCGCTCACGGTCTTCGGCCGCAAGCTCGCCGTGCCGCTCGCGGCGCGCGGCGT
CGCCCGGTTCGACTTCGCCGCCCTCTGCGCCCAGGCGCTCGGCTCGGGGGATTATCTCGCCCTCGCCACCCATTACGACA
CCGTGCTGATCGACGGCATTCCCCGTCTTTCGCCGGACAATTTCGACGAGGCGCGGCGCTTCATCACCCTGATCGACGCG
CTCTACGAGCATCGGGTGAAGCTCTACGCCTCGGCCGCGGCGGAACCCGCGGCACTGTATACCTCGGGCGAGGGGGTCGC
GATCTTCGAGCGCACCGTCTCCCGCCTCGAGGAAATGCGCAGCGAGGCGTATTTCGCCCTCGCGCATCTGACCTGA

Upstream 100 bases:

>100_bases
GCCGGCCTGAGCGAGGGCCGGATGTTGCGCCGCCGCATGGAGTGCGCTACCGGCGCTGCTCATGCTGATGAAGGCACCTG
AACGGTCCGACGGTGGCGTG

Downstream 100 bases:

>100_bases
GATGCGGTTGCGCCGCTCCGGCCATTGGTCTAGGCCGCACGACGACGGAACCGCCCGGGACGGACGGCGCGCAAGGCGCC
GGGTTTCGAGTGACAGGCGA

Product: AFG1 family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MSAYRTRIDAGTILPDPVQRRAAERLHELWGRLRDYDPQPKAPPNGWLGRLLNKKRVDEVPEDYPSGLYLVGEVGRGKSM
LMDLFFAAAEVPRKRRVHFHEFMQQAHARLHRLRAERPDADAVLSLADIIASESALLCFDEFQVHDIGDAMILARLFEAL
FARAVVVVATSNTLPDDLYRNKPGYDSFRPFIALLKRHLDVMVLDGGRDYRRERVRGARNWYVPADGRAERALDDVFAEL
TGGAAPRAEALTVFGRKLAVPLAARGVARFDFAALCAQALGSGDYLALATHYDTVLIDGIPRLSPDNFDEARRFITLIDA
LYEHRVKLYASAAAEPAALYTSGEGVAIFERTVSRLEEMRSEAYFALAHLT

Sequences:

>Translated_371_residues
MSAYRTRIDAGTILPDPVQRRAAERLHELWGRLRDYDPQPKAPPNGWLGRLLNKKRVDEVPEDYPSGLYLVGEVGRGKSM
LMDLFFAAAEVPRKRRVHFHEFMQQAHARLHRLRAERPDADAVLSLADIIASESALLCFDEFQVHDIGDAMILARLFEAL
FARAVVVVATSNTLPDDLYRNKPGYDSFRPFIALLKRHLDVMVLDGGRDYRRERVRGARNWYVPADGRAERALDDVFAEL
TGGAAPRAEALTVFGRKLAVPLAARGVARFDFAALCAQALGSGDYLALATHYDTVLIDGIPRLSPDNFDEARRFITLIDA
LYEHRVKLYASAAAEPAALYTSGEGVAIFERTVSRLEEMRSEAYFALAHLT
>Mature_370_residues
SAYRTRIDAGTILPDPVQRRAAERLHELWGRLRDYDPQPKAPPNGWLGRLLNKKRVDEVPEDYPSGLYLVGEVGRGKSML
MDLFFAAAEVPRKRRVHFHEFMQQAHARLHRLRAERPDADAVLSLADIIASESALLCFDEFQVHDIGDAMILARLFEALF
ARAVVVVATSNTLPDDLYRNKPGYDSFRPFIALLKRHLDVMVLDGGRDYRRERVRGARNWYVPADGRAERALDDVFAELT
GGAAPRAEALTVFGRKLAVPLAARGVARFDFAALCAQALGSGDYLALATHYDTVLIDGIPRLSPDNFDEARRFITLIDAL
YEHRVKLYASAAAEPAALYTSGEGVAIFERTVSRLEEMRSEAYFALAHLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=402, Percent_Identity=37.0646766169154, Blast_Score=254, Evalue=1e-67,
Organism=Escherichia coli, GI1789627, Length=373, Percent_Identity=37.5335120643432, Blast_Score=228, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17505769, Length=409, Percent_Identity=34.4743276283619, Blast_Score=240, Evalue=1e-63,
Organism=Saccharomyces cerevisiae, GI6320783, Length=404, Percent_Identity=34.4059405940594, Blast_Score=196, Evalue=4e-51,
Organism=Drosophila melanogaster, GI20129913, Length=422, Percent_Identity=36.0189573459716, Blast_Score=230, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 41568; Mature: 41437

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYRTRIDAGTILPDPVQRRAAERLHELWGRLRDYDPQPKAPPNGWLGRLLNKKRVDEV
CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
PEDYPSGLYLVGEVGRGKSMLMDLFFAAAEVPRKRRVHFHEFMQQAHARLHRLRAERPDA
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAVLSLADIIASESALLCFDEFQVHDIGDAMILARLFEALFARAVVVVATSNTLPDDLYR
HHHHHHHHHHHCCCCEEEECCCHHHHCHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHC
NKPGYDSFRPFIALLKRHLDVMVLDGGRDYRRERVRGARNWYVPADGRAERALDDVFAEL
CCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TGGAAPRAEALTVFGRKLAVPLAARGVARFDFAALCAQALGSGDYLALATHYDTVLIDGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCC
PRLSPDNFDEARRFITLIDALYEHRVKLYASAAAEPAALYTSGEGVAIFERTVSRLEEMR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH
SEAYFALAHLT
HHHHHHHEECC
>Mature Secondary Structure 
SAYRTRIDAGTILPDPVQRRAAERLHELWGRLRDYDPQPKAPPNGWLGRLLNKKRVDEV
CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
PEDYPSGLYLVGEVGRGKSMLMDLFFAAAEVPRKRRVHFHEFMQQAHARLHRLRAERPDA
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DAVLSLADIIASESALLCFDEFQVHDIGDAMILARLFEALFARAVVVVATSNTLPDDLYR
HHHHHHHHHHHCCCCEEEECCCHHHHCHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHC
NKPGYDSFRPFIALLKRHLDVMVLDGGRDYRRERVRGARNWYVPADGRAERALDDVFAEL
CCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TGGAAPRAEALTVFGRKLAVPLAARGVARFDFAALCAQALGSGDYLALATHYDTVLIDGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEECCC
PRLSPDNFDEARRFITLIDALYEHRVKLYASAAAEPAALYTSGEGVAIFERTVSRLEEMR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHH
SEAYFALAHLT
HHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]