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The map label for this gene is pepF [H]

Identifier: 148260482

GI number: 148260482

Start: 1644786

End: 1646633

Strand: Reverse

Name: pepF [H]

Synonym: Acry_1482

Alternate gene names: 148260482

Gene position: 1646633-1644786 (Counterclockwise)

Preceding gene: 148260485

Following gene: 148260481

Centisome position: 48.58

GC content: 66.23

Gene sequence:

>1848_bases
ATGACGTTGATTCGGCCACTGGCCCCGCCCGACGATCTGGCCGGCGTAACAGTACGGCCTGAATGCGACAGCGACGCCGC
CTTCGCCCTGCCGTCCTGGAATCTCACCGATCTCTACCGTGGCACCGAGGATCCCGCGATCGCGACCGATATCGCAAGGC
TGGGCGCCGATGCGCGCGCCTTTGCCGCCGCTTTTCGCGGACGGGTTGCCGGGTTGGACGGCTCTGGGCTCGCCGAGGCG
ATTGCCCGATACGAGGCGATCGAACAGGGGCTTGGGCGTTTGCACGCCTTCGCCCAGCTGAATTTCAGCGCCGACGCGAC
CGTTCCGACTGCGGGGCAGTTCTACCAGTCGATATCCGAACGGGCGACGGAAATCGGAGCGGACGTCGTTTTCTTCACGC
TGGAGATCAACCAGATTGACGACGCCGCCTTCGAGGCGGCGCTCGCCGATCCTGCGCTGGCGCGCTTTGCGCCGTGGCTG
GGCGACCTGCGCGCCCTGCGCCCGCATCAGCTTTCCGATGAGATCGAGCGGCTCCTGCACGAAAAGGAGGTGACAGGCCA
TGCCGCCTGGTCCCGCCTGTTCGACGAGACCATCGCTGCGCTACGGGTCCCGGTTGCAGGCGAGGAACTGACGCTCTCCG
CGGCTCTCAACCGGCTTTCCGACCCGGATCGCGCGCAGCGCGAGGCAGCCGGCCATGCGATCGGTACGACCCTGCAGCGC
AATGCACGGCTGTTCACCCAGATTCTGAACACGATCGCGAAGGACAAGGCGATCGAAGATGGCTGGCGGCGCTACGCGTC
GCCCGAAGCAGCGCGCCACCTCGCCAACCGGGTGGAGCCCGCCGTGGTCGAGGCGCTAGTCTCTGCGGTGACCGATGCGT
ATCCCCGGCTTGCCCACCGGTATTACACGTTGAAGGCCGGTTGGCTTGGTCTTGACCGTCTGCAACACTGGGACCGGAAC
GCGCCGCTGCCCGGCGAGTCCGACCGGCGGATCGGCTGGCCGGAGGCGAGGGAGCGGGTACTCGCCGCCTATGGTGCCTT
CAGCCCGGAGATGCGCGTGATCGCTGCCCGGTTCTTCGATGGCGGCTGGATCGATGCCGTGCCGCGCCCGGGCAAGTCCG
GCGGCGCCTTCGCCCATCCCGCCGTTCCGGACGTGCATCCCTACATCCTCCTGAACTACCACGGGCGCGCGCGCGATGTG
ATGACGCTGGCCCACGAGCTGGGGCACGGCGTGCATCAGGTTCTCGCCGCACGCCAAGGGTATCTGATGGCCGCAACGCC
GCTGACCCTGGCGGAGACCGCCAGCGTGTTCGGCGAGATGCTCACTTTCCGTGCCCTGCTCGACGCCGAAAGCGACCCGC
AGCGTCGCCGGCTGATGCTGGCTCAGAAGGTGGAGGACATGCTGAACACGGTGGTGCGGCAGATCGCCTTTCACCAGTTC
GAGCAGCGCCTGCACGCGGCGCGGCGGCGGGGCGAGTTGTTGCTTGACGAGATCAGCGCCATCTGGATTGGCGTGCAGCG
GGAAAGTCTGGGCCCGGCGTTCGAATTTTCCGACGACTACCGCATGTTCTGGGCCTATGTGCCGCATTTCGTGCATTCGC
CATTCTACGTCTATGCCTATGCCTTCGGTGATTGCCTGGTGAATGCGCTCTACGGCGTATATCGCGACCAGGCGGCGCGT
GGCGCAGGGGCGGATTTCGTTGCGCGCTACCTCGATATGCTCGCCGCCGGCGGCACGAGGCGGCATCGCGAATTGCTGGC
TCCGTTTGGCCTCGATGCGTCCGATCCGGCGTTCTGGCGCAGGGGGCTCGATGTGATTGCCGGCTTTATCGACGAACTGG
AAAACTGA

Upstream 100 bases:

>100_bases
ATCTTGGATCGGCAGATAATCGCCTGCGGCGGGACGCGCCAGAGCCCGGCATTTGACGGGCGGCTTTTCCGGCCTATCTC
TGGGACGTAAGGAGTGATTG

Downstream 100 bases:

>100_bases
GGAAAATCGGGGATACATGGGCAACGAAGCGGATACCGGCGGCACGCTGTTCGGCGAAATCAGGCGCTTTGCCCGCACCT
CGGGCGCGGTTTCCGGCATT

Product: pepF/M3 family oligoendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MTLIRPLAPPDDLAGVTVRPECDSDAAFALPSWNLTDLYRGTEDPAIATDIARLGADARAFAAAFRGRVAGLDGSGLAEA
IARYEAIEQGLGRLHAFAQLNFSADATVPTAGQFYQSISERATEIGADVVFFTLEINQIDDAAFEAALADPALARFAPWL
GDLRALRPHQLSDEIERLLHEKEVTGHAAWSRLFDETIAALRVPVAGEELTLSAALNRLSDPDRAQREAAGHAIGTTLQR
NARLFTQILNTIAKDKAIEDGWRRYASPEAARHLANRVEPAVVEALVSAVTDAYPRLAHRYYTLKAGWLGLDRLQHWDRN
APLPGESDRRIGWPEARERVLAAYGAFSPEMRVIAARFFDGGWIDAVPRPGKSGGAFAHPAVPDVHPYILLNYHGRARDV
MTLAHELGHGVHQVLAARQGYLMAATPLTLAETASVFGEMLTFRALLDAESDPQRRRLMLAQKVEDMLNTVVRQIAFHQF
EQRLHAARRRGELLLDEISAIWIGVQRESLGPAFEFSDDYRMFWAYVPHFVHSPFYVYAYAFGDCLVNALYGVYRDQAAR
GAGADFVARYLDMLAAGGTRRHRELLAPFGLDASDPAFWRRGLDVIAGFIDELEN

Sequences:

>Translated_615_residues
MTLIRPLAPPDDLAGVTVRPECDSDAAFALPSWNLTDLYRGTEDPAIATDIARLGADARAFAAAFRGRVAGLDGSGLAEA
IARYEAIEQGLGRLHAFAQLNFSADATVPTAGQFYQSISERATEIGADVVFFTLEINQIDDAAFEAALADPALARFAPWL
GDLRALRPHQLSDEIERLLHEKEVTGHAAWSRLFDETIAALRVPVAGEELTLSAALNRLSDPDRAQREAAGHAIGTTLQR
NARLFTQILNTIAKDKAIEDGWRRYASPEAARHLANRVEPAVVEALVSAVTDAYPRLAHRYYTLKAGWLGLDRLQHWDRN
APLPGESDRRIGWPEARERVLAAYGAFSPEMRVIAARFFDGGWIDAVPRPGKSGGAFAHPAVPDVHPYILLNYHGRARDV
MTLAHELGHGVHQVLAARQGYLMAATPLTLAETASVFGEMLTFRALLDAESDPQRRRLMLAQKVEDMLNTVVRQIAFHQF
EQRLHAARRRGELLLDEISAIWIGVQRESLGPAFEFSDDYRMFWAYVPHFVHSPFYVYAYAFGDCLVNALYGVYRDQAAR
GAGADFVARYLDMLAAGGTRRHRELLAPFGLDASDPAFWRRGLDVIAGFIDELEN
>Mature_614_residues
TLIRPLAPPDDLAGVTVRPECDSDAAFALPSWNLTDLYRGTEDPAIATDIARLGADARAFAAAFRGRVAGLDGSGLAEAI
ARYEAIEQGLGRLHAFAQLNFSADATVPTAGQFYQSISERATEIGADVVFFTLEINQIDDAAFEAALADPALARFAPWLG
DLRALRPHQLSDEIERLLHEKEVTGHAAWSRLFDETIAALRVPVAGEELTLSAALNRLSDPDRAQREAAGHAIGTTLQRN
ARLFTQILNTIAKDKAIEDGWRRYASPEAARHLANRVEPAVVEALVSAVTDAYPRLAHRYYTLKAGWLGLDRLQHWDRNA
PLPGESDRRIGWPEARERVLAAYGAFSPEMRVIAARFFDGGWIDAVPRPGKSGGAFAHPAVPDVHPYILLNYHGRARDVM
TLAHELGHGVHQVLAARQGYLMAATPLTLAETASVFGEMLTFRALLDAESDPQRRRLMLAQKVEDMLNTVVRQIAFHQFE
QRLHAARRRGELLLDEISAIWIGVQRESLGPAFEFSDDYRMFWAYVPHFVHSPFYVYAYAFGDCLVNALYGVYRDQAARG
AGADFVARYLDMLAAGGTRRHRELLAPFGLDASDPAFWRRGLDVIAGFIDELEN

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 67987; Mature: 67855

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIRPLAPPDDLAGVTVRPECDSDAAFALPSWNLTDLYRGTEDPAIATDIARLGADARA
CCCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHCCHHHH
FAAAFRGRVAGLDGSGLAEAIARYEAIEQGLGRLHAFAQLNFSADATVPTAGQFYQSISE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RATEIGADVVFFTLEINQIDDAAFEAALADPALARFAPWLGDLRALRPHQLSDEIERLLH
HHHHHCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EKEVTGHAAWSRLFDETIAALRVPVAGEELTLSAALNRLSDPDRAQREAAGHAIGTTLQR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
NARLFTQILNTIAKDKAIEDGWRRYASPEAARHLANRVEPAVVEALVSAVTDAYPRLAHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YYTLKAGWLGLDRLQHWDRNAPLPGESDRRIGWPEARERVLAAYGAFSPEMRVIAARFFD
HHEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
GGWIDAVPRPGKSGGAFAHPAVPDVHPYILLNYHGRARDVMTLAHELGHGVHQVLAARQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
YLMAATPLTLAETASVFGEMLTFRALLDAESDPQRRRLMLAQKVEDMLNTVVRQIAFHQF
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLHAARRRGELLLDEISAIWIGVQRESLGPAFEFSDDYRMFWAYVPHFVHSPFYVYAY
HHHHHHHHHHCHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
AFGDCLVNALYGVYRDQAARGAGADFVARYLDMLAAGGTRRHRELLAPFGLDASDPAFWR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHH
RGLDVIAGFIDELEN
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLIRPLAPPDDLAGVTVRPECDSDAAFALPSWNLTDLYRGTEDPAIATDIARLGADARA
CCCCCCCCCCCCCCCEECCCCCCCCEEECCCCCHHHHHCCCCCCHHHHHHHHHCCHHHH
FAAAFRGRVAGLDGSGLAEAIARYEAIEQGLGRLHAFAQLNFSADATVPTAGQFYQSISE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
RATEIGADVVFFTLEINQIDDAAFEAALADPALARFAPWLGDLRALRPHQLSDEIERLLH
HHHHHCCCEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EKEVTGHAAWSRLFDETIAALRVPVAGEELTLSAALNRLSDPDRAQREAAGHAIGTTLQR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
NARLFTQILNTIAKDKAIEDGWRRYASPEAARHLANRVEPAVVEALVSAVTDAYPRLAHR
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YYTLKAGWLGLDRLQHWDRNAPLPGESDRRIGWPEARERVLAAYGAFSPEMRVIAARFFD
HHEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
GGWIDAVPRPGKSGGAFAHPAVPDVHPYILLNYHGRARDVMTLAHELGHGVHQVLAARQG
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
YLMAATPLTLAETASVFGEMLTFRALLDAESDPQRRRLMLAQKVEDMLNTVVRQIAFHQF
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRLHAARRRGELLLDEISAIWIGVQRESLGPAFEFSDDYRMFWAYVPHFVHSPFYVYAY
HHHHHHHHHHCHHHHHHHHHHHEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
AFGDCLVNALYGVYRDQAARGAGADFVARYLDMLAAGGTRRHRELLAPFGLDASDPAFWR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHH
RGLDVIAGFIDELEN
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]