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The map label for this gene is fliN [H]

Identifier: 148260473

GI number: 148260473

Start: 1637133

End: 1637531

Strand: Reverse

Name: fliN [H]

Synonym: Acry_1473

Alternate gene names: 148260473

Gene position: 1637531-1637133 (Counterclockwise)

Preceding gene: 148260474

Following gene: 148260472

Centisome position: 48.32

GC content: 58.9

Gene sequence:

>399_bases
TTGGAACCGGAAAGGAAGACGACCTTGTCATCTGAAATCACGACGCCAACCGGAGAGCCGAATGGCAATGGCCAGGTGTT
GTCGGACCTGCCGCTTGCGCCGGTTTCCCGCCGCACGGCGGGAGATGGGCCTGAGACCCAGCGCCCCAGCCGGGATCTTG
AGGCTGTCTACGATGTGCCCGTGCTCGTCAGTGCCGTGCTGGGTCGCTCGACCATGCAGGTCAGCCAGTTGCTTAAGCTT
GGTCGAGGCGCCGTCGTCGAACTCGATCGTAAAGCCGGAGACCCGATTGATATCTTTGTCAACAATCGCCTGATTGCACG
TGGCGAAGTGGTGATGCTCGACGAAACGAAGCTCGGCATTACCATGACCGAAATCGTCAAATCTGACCGCAACGGTTGA

Upstream 100 bases:

>100_bases
ATCGAGGCGCTGGGCCCGGTGCGTTTGCGCGATGTTGATGCCGCGCAGCTAGCGATCGTGACCACAGCAAAGGAACTCGC
CGCTCAGGGCGAAATCGAGA

Downstream 100 bases:

>100_bases
CCGACTATGCGGGTTCTCATCATCGGTTCACTGTCGGGAGAACTTGGTGTCGCAGCTCGTATTGCTGCGGCTCGGGGTGC
AACGCTCGCACAGGCTGAGA

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MEPERKTTLSSEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPSRDLEAVYDVPVLVSAVLGRSTMQVSQLLKL
GRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGITMTEIVKSDRNG

Sequences:

>Translated_132_residues
MEPERKTTLSSEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPSRDLEAVYDVPVLVSAVLGRSTMQVSQLLKL
GRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGITMTEIVKSDRNG
>Mature_132_residues
MEPERKTTLSSEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPSRDLEAVYDVPVLVSAVLGRSTMQVSQLLKL
GRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGITMTEIVKSDRNG

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=76, Percent_Identity=43.421052631579, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 14225; Mature: 14225

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPERKTTLSSEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPSRDLEAVYDVP
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLVSAVLGRSTMQVSQLLKLGRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGI
HHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCEEECCCCEEEEECCCCCC
TMTEIVKSDRNG
HHHHHHHCCCCC
>Mature Secondary Structure
MEPERKTTLSSEITTPTGEPNGNGQVLSDLPLAPVSRRTAGDGPETQRPSRDLEAVYDVP
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
VLVSAVLGRSTMQVSQLLKLGRGAVVELDRKAGDPIDIFVNNRLIARGEVVMLDETKLGI
HHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCEEECCCCEEEEECCCCCC
TMTEIVKSDRNG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647; 2315326; 1732219 [H]