| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is xylA [H]
Identifier: 148260264
GI number: 148260264
Start: 1406539
End: 1407609
Strand: Reverse
Name: xylA [H]
Synonym: Acry_1261
Alternate gene names: 148260264
Gene position: 1407609-1406539 (Counterclockwise)
Preceding gene: 148260265
Following gene: 148260263
Centisome position: 41.53
GC content: 71.62
Gene sequence:
>1071_bases ATGGGGCTGCTCGACCGTCTCTTCGGCGGCAGGCAGGGCGCGGCGAGCGTCCGCGTCCTGCCCGCGGATCTCAGCTTCGA CGTGCCGCCGAAGCAGACCATCCTGCAGGCCGCGCTCGACCAGGGCATCGCCTATCCGCACAGCTGCCGTGTGGGCTCCT GCGGCACCTGCAAGACCAGGCTGGTCGAGGGCGAGGTGCGCGAACTCACCGACAAATCCTACCTCCTGACCGACGAGGAG ATGCGCGCCGGCGTCATCCTCGCCTGCCAGTCGGTGCCGAAGGGCCCGGTCGTTCTCGAGAACGACCGGCTTTCCCTCGG CGGCCCCCGGCATGACGTGATCGCCGCCCGCGCCAGCATCGCAGCACTCGACCGCATGACGCCGGACATCATGCGCCTGT CCGTGACGCTCGATGCCCCGCTCGCCTACACCGCCGGCCAGTATGCCGAGCTGGCACGGCCCGGCGACGAGGCGCGGCAG TTCTCCTTCATCGACCCGCCCTCCGGCCCGGCGGCGACCACCGCCCGCTTCTTCATCCGCCACGTCCCCGGCGGCGCCGT CACCTCCTGGCTGTTCGAGGCGGCACGCCCCGGCGACACGCTCGACCTGCGCGGCCCGTTCGGCGATTTCTGGCTCCGCC CCGGCACCGCCCCCATCGTCGCCATCGCCGGCGGATCGGGGCTCGGTCCGGTCAAGGCGGTGCTCGAACAGGCGCGGGCC GACCGCGTGCCGCGCGACGCGATCCTGATTTTCGGCGTCCGCACCAGGGCCGATCTCTACGCGCTCGACGAGATTTCGCT TCTCACCCGCAGCTGGATTTCCCGTTTCACCTTCGTGCCGGTCCTCTCGGCCGAGCCGGCGGGCTCTGACTGGTCTGGCG CGCGGGGTTTCGTGCACGAGCATCTCGCCGCGCTCGGCGTGGCACTCGCCGGCCATCAGGCCTATCTCTGCGGTCCGCCC GTGATGATCGACGCCGCACTGCCGGTGCTGCGCGCGGCGGGCATCGCGGCGGCCGACATTCACTACGACGCCTTCACCGA CCGCTCGACCGGCGCGATCGCCGCCGCCTGA
Upstream 100 bases:
>100_bases CGAATTCCCGCTGATCGAGGCGGCGAATGCCCGCAGCGGCGTGCCCGAGTTTGCCGCCTCGCGCGCGCATCTCGCCACCC TGGCCGCGGCGGAGTAACCG
Downstream 100 bases:
>100_bases GCGACGGCGGCCCGGAAAGGGAGATTGACGACATGGACTTGATCACTGCCCTCTGGTGGCTCGCCGGCATCGCCGGCGCC GGCGCCCTCATTGCCGCGCG
Product: ferredoxin
Products: NA
Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MGLLDRLFGGRQGAASVRVLPADLSFDVPPKQTILQAALDQGIAYPHSCRVGSCGTCKTRLVEGEVRELTDKSYLLTDEE MRAGVILACQSVPKGPVVLENDRLSLGGPRHDVIAARASIAALDRMTPDIMRLSVTLDAPLAYTAGQYAELARPGDEARQ FSFIDPPSGPAATTARFFIRHVPGGAVTSWLFEAARPGDTLDLRGPFGDFWLRPGTAPIVAIAGGSGLGPVKAVLEQARA DRVPRDAILIFGVRTRADLYALDEISLLTRSWISRFTFVPVLSAEPAGSDWSGARGFVHEHLAALGVALAGHQAYLCGPP VMIDAALPVLRAAGIAAADIHYDAFTDRSTGAIAAA
Sequences:
>Translated_356_residues MGLLDRLFGGRQGAASVRVLPADLSFDVPPKQTILQAALDQGIAYPHSCRVGSCGTCKTRLVEGEVRELTDKSYLLTDEE MRAGVILACQSVPKGPVVLENDRLSLGGPRHDVIAARASIAALDRMTPDIMRLSVTLDAPLAYTAGQYAELARPGDEARQ FSFIDPPSGPAATTARFFIRHVPGGAVTSWLFEAARPGDTLDLRGPFGDFWLRPGTAPIVAIAGGSGLGPVKAVLEQARA DRVPRDAILIFGVRTRADLYALDEISLLTRSWISRFTFVPVLSAEPAGSDWSGARGFVHEHLAALGVALAGHQAYLCGPP VMIDAALPVLRAAGIAAADIHYDAFTDRSTGAIAAA >Mature_355_residues GLLDRLFGGRQGAASVRVLPADLSFDVPPKQTILQAALDQGIAYPHSCRVGSCGTCKTRLVEGEVRELTDKSYLLTDEEM RAGVILACQSVPKGPVVLENDRLSLGGPRHDVIAARASIAALDRMTPDIMRLSVTLDAPLAYTAGQYAELARPGDEARQF SFIDPPSGPAATTARFFIRHVPGGAVTSWLFEAARPGDTLDLRGPFGDFWLRPGTAPIVAIAGGSGLGPVKAVLEQARAD RVPRDAILIFGVRTRADLYALDEISLLTRSWISRFTFVPVLSAEPAGSDWSGARGFVHEHLAALGVALAGHQAYLCGPPV MIDAALPVLRAAGIAAADIHYDAFTDRSTGAIAAA
Specific function: Oxidizes toluene and xylenes to (methyl)benzyl alcohols. The enzyme has a broad specificity and also oxidizes (methyl)benzyl alcohols to (methyl)benzaldehydes and indole to indoxyl [H]
COG id: COG0543
COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=241, Percent_Identity=25.7261410788382, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788903, Length=201, Percent_Identity=29.8507462686567, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.3 [H]
Molecular weight: Translated: 37673; Mature: 37542
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLDRLFGGRQGAASVRVLPADLSFDVPPKQTILQAALDQGIAYPHSCRVGSCGTCKTR CCCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LVEGEVRELTDKSYLLTDEEMRAGVILACQSVPKGPVVLENDRLSLGGPRHDVIAARASI EECCHHHHHCCCCEEEECHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHH AALDRMTPDIMRLSVTLDAPLAYTAGQYAELARPGDEARQFSFIDPPSGPAATTARFFIR HHHHHCCCCCEEEEEEECCCCHHCCCCHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHH HVPGGAVTSWLFEAARPGDTLDLRGPFGDFWLRPGTAPIVAIAGGSGLGPVKAVLEQARA CCCCHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHH DRVPRDAILIFGVRTRADLYALDEISLLTRSWISRFTFVPVLSAEPAGSDWSGARGFVHE CCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHH HLAALGVALAGHQAYLCGPPVMIDAALPVLRAAGIAAADIHYDAFTDRSTGAIAAA HHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECC >Mature Secondary Structure GLLDRLFGGRQGAASVRVLPADLSFDVPPKQTILQAALDQGIAYPHSCRVGSCGTCKTR CCHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH LVEGEVRELTDKSYLLTDEEMRAGVILACQSVPKGPVVLENDRLSLGGPRHDVIAARASI EECCHHHHHCCCCEEEECHHHCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHH AALDRMTPDIMRLSVTLDAPLAYTAGQYAELARPGDEARQFSFIDPPSGPAATTARFFIR HHHHHCCCCCEEEEEEECCCCHHCCCCHHHHCCCCCHHHEEECCCCCCCCHHHHHHHHHH HVPGGAVTSWLFEAARPGDTLDLRGPFGDFWLRPGTAPIVAIAGGSGLGPVKAVLEQARA CCCCHHHHHHHHHHCCCCCEEECCCCCCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHH DRVPRDAILIFGVRTRADLYALDEISLLTRSWISRFTFVPVLSAEPAGSDWSGARGFVHE CCCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHH HLAALGVALAGHQAYLCGPPVMIDAALPVLRAAGIAAADIHYDAFTDRSTGAIAAA HHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1999388 [H]