| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is hcrA [H]
Identifier: 148260129
GI number: 148260129
Start: 1254458
End: 1256722
Strand: Reverse
Name: hcrA [H]
Synonym: Acry_1125
Alternate gene names: 148260129
Gene position: 1256722-1254458 (Counterclockwise)
Preceding gene: 148260133
Following gene: 148260128
Centisome position: 37.08
GC content: 73.02
Gene sequence:
>2265_bases GTGCCGGCGGACGAGCCGCCGCCGCTGCCGCCGAACGCCGAACTCGCGGTCATCGGCCGTTCGGTTCCCCGGCTGAACGG GCGCGACAAGGTCACGGGCGCCACGCGCTACACGGTCGACATCGCGCCGCGCGGCATGCTGCATGCCCGCCTGCTGCGCG CGCCCCTCGCGCATGCCCGCATCCGCGCGATCGACGCCGGCGCGGCCCGCGCGCTCGATGGCGTCCGCGCGGTCGTCATC CTGGCGCAGCCCGGCGATCCCCTGTCGGGCATGGTCCGCTATGCCGGCCAGCCGGTCGCCGCACTCGCCGCCGACTCGCC GGCCATCGCCCGCGCGGCGCTCGATCTCGTCCGTGTCGACTACGAAGCGCTCCCCTTCGTCGTCGACATGGAAGACGCCC GCGCCAGCGAAGCGCCGCCGGTCTATGCCCCCGGCACCGCGCCGGCCGGCCATCCCTCCGGCTTCCCGGCCCCCGCCGGT CTCGCCCGACACGGCAACGTCCGCGCCGCCGTGATCGACCGGCGGGGCGACGTCGCCGCCGGCCTCGCCGCGGCCGATGT GGTGGTGGAGGGCACCTATCGCACCCAGGTGCAGACCCATTGCTGCATGGAGCCCCACGCCATCGTCGCGGACTGGACGG AGGACGGGCTCACCGTCCACATGTCCACCCAGTTCACCGCCGGCATCCGCCACGAACTCGCCGCCGCGTTTCAGCTCCCG CTCAGCCGCGTGCGCGTCGTGGTCGACGGCATGGGCGGCGGCTTCGGCTCGAAATCGACCCTCGGCACCTATGGGCGCGC CGCCGTCGCCCTCTCCCGCGCGGCCGGCGCGCCCGTCCGCCTGGTGCTGACCCGCGCCGAGGAGCAGGTCGATTCCGGCA ACCGCCCCGGCACGTTCCAGCACCTGCGCATCGGCGCCCGGCGCGATGGCACGCTGACCGCGATCGAACTGACCAGCCAT GGCACGGCGGGCGTGGCGCTCGGCGCCGGCGTCGGCGACTTTGCCGGCGCGGTCTACCGGTGTCCGAACCTGCTGACATC GCATCGCGACGTCTTCACCAATGCCGGACCCGGCTGCGCCATGCGCGCGCCGGGAAACGTGCCGGGCGCCTTCGCCTTCG AACAGGCGATCGACGAGCTCGCCGAACGCCTCGCGCTCGATCCCGTTGCCCTGCGCGACAGGATCGATCCCAGCCCGGTC CGCCGCGAGGAACGGCGGATCGGCGCCGCGCGCTTCGGCTGGGCCGCCCGCCATCCGCCGGGTTCGGATCGGGGGCCGGT CAAGCGCGGCATCGGCATGGCGCAGTCCCACTGGGGCGCGCATGTGCAGATCAACGCGGCCTGCGAGGTCCGTGTCCTGC GCGACGGCTCGGTGGAGGTGATGTCGAGCGTGCAGGATATCGGCACCGGCATCACCACGGTGCTCGCCCAGACGGTGGCG GAAGTCCTCGGCCTGCGCGCGGAGGATATCACGGTCCGCATCGGCGATACCATCTTTCCGTCGGGGCCGCCGTCCTATGG CAGCCGCACGACGGCGTCGATCACGCCGCCCGCCCGCACCGCCGCCTGGCGCGTGCTCCGCCGCCTGCTGGCCGAAGCCG CCCAGCGCCTGGGCGTCGCGCCGGATGCCCTGATCGCCCGCGCCGGGCGGATCATCGTCCGCGACGATCCTGCCCGGGGC CTGGCCTTCGGCGAGGTCACGGCGCGGCTGCGCACGGATTCCATCAGCGAAGTCGCCTCCCGCGCCGACGATTACGCCGG CTTCGGGCAACGCTACGGCGACGCGGCGACGGCCCGGCAGGATCTCGGCGGCGTGCAGTTCGCCGCCGTCGCGGTCGATA CCGAAACCGGCATCATCCGGGTCGAGCGCGTGCTCGCCGTCCAGGATTGCGGCCGCCCGATGAACCCGCGTCAGATCGAA AGCCAGGTTCATGGCGGCATCCTGATGGGCCTGTCCTACGCGCTGTTCGAGGACCGCATCATGGACCGTCACACCGGCCG CATGGTCAACCCCGATCTCGAGCAATACAAGATCGCCGGACCGTACGAGACCCCCGCGATCGACGTCGTCCTCCTCGAAA ACTACGAAGCCAACAGCGCAACCGATGCCTACGGCATCGCCGAGCCGGCGAACATCGCCACCGCGCCGGCGATCGCCAAC GCCGTCCGCAACGCCATCGGCATCCGCATGCGGCGCCTGCCGATGACCCCGGCCGCGGTGCTGGCGGCGCTCGGCGGCTC TCCGTCCCGGAACCTGCCCCCATGA
Upstream 100 bases:
>100_bases GTGTACGGAAATCCTGAGCATGGCGCATGATCCGTCACGCCGCACCGAGCGCTTCCCCCACGGCATCGCCGGGGCCGGCC TCGGGTCGATCGAGCGGTCG
Downstream 100 bases:
>100_bases AGCCGTTCGCCACGCTCCGCGCCCCGACGATCGCCGCCGCCGCCGCCTCGGCCTCCACGACGATGGCGGAAGCGATGACC CGCGCCGGCCCGGCGAACGG
Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 754; Mature: 753
Protein sequence:
>754_residues MPADEPPPLPPNAELAVIGRSVPRLNGRDKVTGATRYTVDIAPRGMLHARLLRAPLAHARIRAIDAGAARALDGVRAVVI LAQPGDPLSGMVRYAGQPVAALAADSPAIARAALDLVRVDYEALPFVVDMEDARASEAPPVYAPGTAPAGHPSGFPAPAG LARHGNVRAAVIDRRGDVAAGLAAADVVVEGTYRTQVQTHCCMEPHAIVADWTEDGLTVHMSTQFTAGIRHELAAAFQLP LSRVRVVVDGMGGGFGSKSTLGTYGRAAVALSRAAGAPVRLVLTRAEEQVDSGNRPGTFQHLRIGARRDGTLTAIELTSH GTAGVALGAGVGDFAGAVYRCPNLLTSHRDVFTNAGPGCAMRAPGNVPGAFAFEQAIDELAERLALDPVALRDRIDPSPV RREERRIGAARFGWAARHPPGSDRGPVKRGIGMAQSHWGAHVQINAACEVRVLRDGSVEVMSSVQDIGTGITTVLAQTVA EVLGLRAEDITVRIGDTIFPSGPPSYGSRTTASITPPARTAAWRVLRRLLAEAAQRLGVAPDALIARAGRIIVRDDPARG LAFGEVTARLRTDSISEVASRADDYAGFGQRYGDAATARQDLGGVQFAAVAVDTETGIIRVERVLAVQDCGRPMNPRQIE SQVHGGILMGLSYALFEDRIMDRHTGRMVNPDLEQYKIAGPYETPAIDVVLLENYEANSATDAYGIAEPANIATAPAIAN AVRNAIGIRMRRLPMTPAAVLAALGGSPSRNLPP
Sequences:
>Translated_754_residues MPADEPPPLPPNAELAVIGRSVPRLNGRDKVTGATRYTVDIAPRGMLHARLLRAPLAHARIRAIDAGAARALDGVRAVVI LAQPGDPLSGMVRYAGQPVAALAADSPAIARAALDLVRVDYEALPFVVDMEDARASEAPPVYAPGTAPAGHPSGFPAPAG LARHGNVRAAVIDRRGDVAAGLAAADVVVEGTYRTQVQTHCCMEPHAIVADWTEDGLTVHMSTQFTAGIRHELAAAFQLP LSRVRVVVDGMGGGFGSKSTLGTYGRAAVALSRAAGAPVRLVLTRAEEQVDSGNRPGTFQHLRIGARRDGTLTAIELTSH GTAGVALGAGVGDFAGAVYRCPNLLTSHRDVFTNAGPGCAMRAPGNVPGAFAFEQAIDELAERLALDPVALRDRIDPSPV RREERRIGAARFGWAARHPPGSDRGPVKRGIGMAQSHWGAHVQINAACEVRVLRDGSVEVMSSVQDIGTGITTVLAQTVA EVLGLRAEDITVRIGDTIFPSGPPSYGSRTTASITPPARTAAWRVLRRLLAEAAQRLGVAPDALIARAGRIIVRDDPARG LAFGEVTARLRTDSISEVASRADDYAGFGQRYGDAATARQDLGGVQFAAVAVDTETGIIRVERVLAVQDCGRPMNPRQIE SQVHGGILMGLSYALFEDRIMDRHTGRMVNPDLEQYKIAGPYETPAIDVVLLENYEANSATDAYGIAEPANIATAPAIAN AVRNAIGIRMRRLPMTPAAVLAALGGSPSRNLPP >Mature_753_residues PADEPPPLPPNAELAVIGRSVPRLNGRDKVTGATRYTVDIAPRGMLHARLLRAPLAHARIRAIDAGAARALDGVRAVVIL AQPGDPLSGMVRYAGQPVAALAADSPAIARAALDLVRVDYEALPFVVDMEDARASEAPPVYAPGTAPAGHPSGFPAPAGL ARHGNVRAAVIDRRGDVAAGLAAADVVVEGTYRTQVQTHCCMEPHAIVADWTEDGLTVHMSTQFTAGIRHELAAAFQLPL SRVRVVVDGMGGGFGSKSTLGTYGRAAVALSRAAGAPVRLVLTRAEEQVDSGNRPGTFQHLRIGARRDGTLTAIELTSHG TAGVALGAGVGDFAGAVYRCPNLLTSHRDVFTNAGPGCAMRAPGNVPGAFAFEQAIDELAERLALDPVALRDRIDPSPVR REERRIGAARFGWAARHPPGSDRGPVKRGIGMAQSHWGAHVQINAACEVRVLRDGSVEVMSSVQDIGTGITTVLAQTVAE VLGLRAEDITVRIGDTIFPSGPPSYGSRTTASITPPARTAAWRVLRRLLAEAAQRLGVAPDALIARAGRIIVRDDPARGL AFGEVTARLRTDSISEVASRADDYAGFGQRYGDAATARQDLGGVQFAAVAVDTETGIIRVERVLAVQDCGRPMNPRQIES QVHGGILMGLSYALFEDRIMDRHTGRMVNPDLEQYKIAGPYETPAIDVVLLENYEANSATDAYGIAEPANIATAPAIANA VRNAIGIRMRRLPMTPAAVLAALGGSPSRNLPP
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To xanthine oxidases [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=693, Percent_Identity=23.3766233766234, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI71773480, Length=803, Percent_Identity=23.0386052303861, Blast_Score=113, Evalue=8e-25, Organism=Escherichia coli, GI1786478, Length=780, Percent_Identity=32.0512820512821, Blast_Score=268, Evalue=7e-73, Organism=Escherichia coli, GI1789230, Length=772, Percent_Identity=29.2746113989637, Blast_Score=263, Evalue=3e-71, Organism=Escherichia coli, GI1789246, Length=805, Percent_Identity=29.3167701863354, Blast_Score=250, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17540638, Length=683, Percent_Identity=23.7188872620791, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI17737937, Length=735, Percent_Identity=26.9387755102041, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24647199, Length=708, Percent_Identity=23.4463276836158, Blast_Score=114, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017607 - InterPro: IPR000674 - InterPro: IPR008274 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 79292; Mature: 79161
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADEPPPLPPNAELAVIGRSVPRLNGRDKVTGATRYTVDIAPRGMLHARLLRAPLAHAR CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH IRAIDAGAARALDGVRAVVILAQPGDPLSGMVRYAGQPVAALAADSPAIARAALDLVRVD EEEECCHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH YEALPFVVDMEDARASEAPPVYAPGTAPAGHPSGFPAPAGLARHGNVRAAVIDRRGDVAA HHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH GLAAADVVVEGTYRTQVQTHCCMEPHAIVADWTEDGLTVHMSTQFTAGIRHELAAAFQLP HHEEEHEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCC LSRVRVVVDGMGGGFGSKSTLGTYGRAAVALSRAAGAPVRLVLTRAEEQVDSGNRPGTFQ HHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCC HLRIGARRDGTLTAIELTSHGTAGVALGAGVGDFAGAVYRCPNLLTSHRDVFTNAGPGCA EEEECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCE MRAPGNVPGAFAFEQAIDELAERLALDPVALRDRIDPSPVRREERRIGAARFGWAARHPP ECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCC GSDRGPVKRGIGMAQSHWGAHVQINAACEVRVLRDGSVEVMSSVQDIGTGITTVLAQTVA CCCCCCHHHCCCCHHHCCCCEEEEECEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHH EVLGLRAEDITVRIGDTIFPSGPPSYGSRTTASITPPARTAAWRVLRRLLAEAAQRLGVA HHHCCCCCCEEEEECCEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCC PDALIARAGRIIVRDDPARGLAFGEVTARLRTDSISEVASRADDYAGFGQRYGDAATARQ HHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DLGGVQFAAVAVDTETGIIRVERVLAVQDCGRPMNPRQIESQVHGGILMGLSYALFEDRI HCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH MDRHTGRMVNPDLEQYKIAGPYETPAIDVVLLENYEANSATDAYGIAEPANIATAPAIAN HHHHCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH AVRNAIGIRMRRLPMTPAAVLAALGGSPSRNLPP HHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PADEPPPLPPNAELAVIGRSVPRLNGRDKVTGATRYTVDIAPRGMLHARLLRAPLAHAR CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHH IRAIDAGAARALDGVRAVVILAQPGDPLSGMVRYAGQPVAALAADSPAIARAALDLVRVD EEEECCHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHH YEALPFVVDMEDARASEAPPVYAPGTAPAGHPSGFPAPAGLARHGNVRAAVIDRRGDVAA HHHCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH GLAAADVVVEGTYRTQVQTHCCMEPHAIVADWTEDGLTVHMSTQFTAGIRHELAAAFQLP HHEEEHEEEECCHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCC LSRVRVVVDGMGGGFGSKSTLGTYGRAAVALSRAAGAPVRLVLTRAEEQVDSGNRPGTFQ HHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCCCCCC HLRIGARRDGTLTAIELTSHGTAGVALGAGVGDFAGAVYRCPNLLTSHRDVFTNAGPGCA EEEECCCCCCCEEEEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCE MRAPGNVPGAFAFEQAIDELAERLALDPVALRDRIDPSPVRREERRIGAARFGWAARHPP ECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHCCHHHCCCCCCCCC GSDRGPVKRGIGMAQSHWGAHVQINAACEVRVLRDGSVEVMSSVQDIGTGITTVLAQTVA CCCCCCHHHCCCCHHHCCCCEEEEECEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHH EVLGLRAEDITVRIGDTIFPSGPPSYGSRTTASITPPARTAAWRVLRRLLAEAAQRLGVA HHHCCCCCCEEEEECCEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCC PDALIARAGRIIVRDDPARGLAFGEVTARLRTDSISEVASRADDYAGFGQRYGDAATARQ HHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH DLGGVQFAAVAVDTETGIIRVERVLAVQDCGRPMNPRQIESQVHGGILMGLSYALFEDRI HCCCCEEEEEEEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH MDRHTGRMVNPDLEQYKIAGPYETPAIDVVLLENYEANSATDAYGIAEPANIATAPAIAN HHHHCCCCCCCCHHHEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH AVRNAIGIRMRRLPMTPAAVLAALGGSPSRNLPP HHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]