| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is nuoL [H]
Identifier: 148260114
GI number: 148260114
Start: 1236699
End: 1238555
Strand: Reverse
Name: nuoL [H]
Synonym: Acry_1110
Alternate gene names: 148260114
Gene position: 1238555-1236699 (Counterclockwise)
Preceding gene: 148260115
Following gene: 148260113
Centisome position: 36.54
GC content: 70.22
Gene sequence:
>1857_bases ATGCAGCATTTCCTCTGGCTCGTCCCCGCGCTGCCGCTCCTCGGCTCGATCGTCCTGATGCTCGGCACCGGGCGCCTGTC GCACCGCGCCGAGGCGCTGATCGGCGTGCTCTCGGTCGGCCTCGCCGCCGTCGTCGCCTTCGCCATCGCCGGCGCCTTCC TGCTCGATCCGCCGGCCGGCGCCGCCTACCAGCAGTCCCTGTGGCGCTGGTTCGCGGTCGGGCATTTCTCCTTCGGCATC GCCCTGCGGGTCGATCCGCTCTCGCTGCTGATGATGCTCGTCACCAGCGGCGTCGGCTTCCTCATCCATCTCTTCTCGAC CGAGTTCATGGAGGGCGAGGAGGGCTACGGCCGGTTCTTCGCCTATCTCAACCTCTTCGTCGCCGCCATGCTGCTGCTGG TGATGGCCGACAATTTCCTCGTCCTCTACGCCGGCTGGGAAGGGGTCGGGCTCTGCTCCTACCTGCTGATCGGCTTCTGG TGGCGCGACCCCGCCAACGGCCTCGCCGCGCGCAAGGCCTTCATCGTCACCCGCGTCGGCGACACCGCCTTCCTGATCGG CCTGCTGCTGATCGCGAGCCGCCTCGGCACGCTGAACATCGCCGGGGCGATGGACGCCGCGTCCCGCACCTGGCATCCCG GCTCGCCGGCCGCGACGCTGATCGCCTTCCTCCTGCTCGGCGGCGCCGTCGGCAAGTCCGCGCAGTTGCCGCTGCAGACC TGGCTGCCCGACGCGATGGCCGGCCCCACCCCGGTCAGCGCGCTCATCCACGCCGCGACGATGGTCACCGCCGGCGTCTA CCTCATCGCCCGCACCCATGTGCTGTTCCTGCTCGCGCCGGCGGCGGAAATCACCGTCGGCATCGTCGGCGCGGCGACCC TGCTGCTCGCCGGCTTCAGCGCCCTCGCGCAGAACGACATCAAGCGCATCCTCGCCTATTCGACGATGAGCCAGATCGGC TACATGTTCCTCGCCCTGGGCGTCGGCGCCTGGCGCGCGGCGATGTTCCACTTCATGACGCACGCCTTCTTCAAGGCGCT GCTGTTCCTCTCGGCCGGCGCCGTCACCATGCGCCTGCATCACGAGCAGGACATCTACCGGATGGGCGGCCTCGCCCGCC GCCTGCCCGCCGCCTTCTGGAGCTTCCTGATCGGCAGCGCCGCCCTTGCCGCCCTGCCGCTGATCACCTCGGGGTTCTAC AGCAAGGAAGCGATCCTCTCGGGCGCCTGGGCCGACGGCAATGGCGGCCGCGTGCTCTGGCTCGCCGGCGTCATCGGCGC CTTCGTCACCGGAATCTACATCTTCCGCGCCGTCTTCATCGCCTTTTTCGGCGAGGAGCACACCCATGTCAGCGGCTCCT ACGGCTGGCGCGTCATCGTGCCGCTGGTGGTGCTCTCGGTGCTGTCGCTGGTCGGCGGCTTCATCGAACTGCCGCCGGCC TTCGGCCACGTCACGCTGCTCTCCAGGCTCCTCGCCCCGGTGCTGCCCCCGACCAGGGAGGTGACCGACATGACCCCGCT GCTGCTCGCCAGCGCCGCGTCCATCCTCGGCATCGCGCTGGCCGCCGTGCTCTACTGGCGCCCGTCGCGCCCGCCGGCCG AAACGCCGCTCTGGCGCTTCTGGCACGCCGCCGCCGGGTTCGACGCGCTCTATGACCGCCTGCTGGTCCGCCCCGTGATC TGGGCCGCCCGGGTCGACCGCGACGATTTCATCGACAGTTTCTACGACGGCATCGCCTGGGCCACGCAGGCGATCCACCG GGCGATCCGGCGCACCCAGACCGGCCGGGTCCGCCTCTATGCCGCGAGCCTCGCCATCGGCTCGGTCGGCCTGATCGCGA TCGCGGTGCTGCGATGA
Upstream 100 bases:
>100_bases GCGGCGGAAGTCTCGGTCGGCCTGGCACTCATCCTGCTGATGCACCGGCGGATCCCCACGCTCGATGCCGATGCCGGCGA CGGTCTGAGGGGGTAGAAAG
Downstream 100 bases:
>100_bases TCCTGTTCTGGCTCCTCATCTTCCCGGCGGTCGGCGGCGTGCTGGCCTGGATCGCCGGCACCCGCAACCCGGATGCCCCG CGCTGGGTGTCGATCGCGGT
Product: proton-translocating NADH-quinone oxidoreductase subunit L
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L; NUO12 [H]
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MQHFLWLVPALPLLGSIVLMLGTGRLSHRAEALIGVLSVGLAAVVAFAIAGAFLLDPPAGAAYQQSLWRWFAVGHFSFGI ALRVDPLSLLMMLVTSGVGFLIHLFSTEFMEGEEGYGRFFAYLNLFVAAMLLLVMADNFLVLYAGWEGVGLCSYLLIGFW WRDPANGLAARKAFIVTRVGDTAFLIGLLLIASRLGTLNIAGAMDAASRTWHPGSPAATLIAFLLLGGAVGKSAQLPLQT WLPDAMAGPTPVSALIHAATMVTAGVYLIARTHVLFLLAPAAEITVGIVGAATLLLAGFSALAQNDIKRILAYSTMSQIG YMFLALGVGAWRAAMFHFMTHAFFKALLFLSAGAVTMRLHHEQDIYRMGGLARRLPAAFWSFLIGSAALAALPLITSGFY SKEAILSGAWADGNGGRVLWLAGVIGAFVTGIYIFRAVFIAFFGEEHTHVSGSYGWRVIVPLVVLSVLSLVGGFIELPPA FGHVTLLSRLLAPVLPPTREVTDMTPLLLASAASILGIALAAVLYWRPSRPPAETPLWRFWHAAAGFDALYDRLLVRPVI WAARVDRDDFIDSFYDGIAWATQAIHRAIRRTQTGRVRLYAASLAIGSVGLIAIAVLR
Sequences:
>Translated_618_residues MQHFLWLVPALPLLGSIVLMLGTGRLSHRAEALIGVLSVGLAAVVAFAIAGAFLLDPPAGAAYQQSLWRWFAVGHFSFGI ALRVDPLSLLMMLVTSGVGFLIHLFSTEFMEGEEGYGRFFAYLNLFVAAMLLLVMADNFLVLYAGWEGVGLCSYLLIGFW WRDPANGLAARKAFIVTRVGDTAFLIGLLLIASRLGTLNIAGAMDAASRTWHPGSPAATLIAFLLLGGAVGKSAQLPLQT WLPDAMAGPTPVSALIHAATMVTAGVYLIARTHVLFLLAPAAEITVGIVGAATLLLAGFSALAQNDIKRILAYSTMSQIG YMFLALGVGAWRAAMFHFMTHAFFKALLFLSAGAVTMRLHHEQDIYRMGGLARRLPAAFWSFLIGSAALAALPLITSGFY SKEAILSGAWADGNGGRVLWLAGVIGAFVTGIYIFRAVFIAFFGEEHTHVSGSYGWRVIVPLVVLSVLSLVGGFIELPPA FGHVTLLSRLLAPVLPPTREVTDMTPLLLASAASILGIALAAVLYWRPSRPPAETPLWRFWHAAAGFDALYDRLLVRPVI WAARVDRDDFIDSFYDGIAWATQAIHRAIRRTQTGRVRLYAASLAIGSVGLIAIAVLR >Mature_618_residues MQHFLWLVPALPLLGSIVLMLGTGRLSHRAEALIGVLSVGLAAVVAFAIAGAFLLDPPAGAAYQQSLWRWFAVGHFSFGI ALRVDPLSLLMMLVTSGVGFLIHLFSTEFMEGEEGYGRFFAYLNLFVAAMLLLVMADNFLVLYAGWEGVGLCSYLLIGFW WRDPANGLAARKAFIVTRVGDTAFLIGLLLIASRLGTLNIAGAMDAASRTWHPGSPAATLIAFLLLGGAVGKSAQLPLQT WLPDAMAGPTPVSALIHAATMVTAGVYLIARTHVLFLLAPAAEITVGIVGAATLLLAGFSALAQNDIKRILAYSTMSQIG YMFLALGVGAWRAAMFHFMTHAFFKALLFLSAGAVTMRLHHEQDIYRMGGLARRLPAAFWSFLIGSAALAALPLITSGFY SKEAILSGAWADGNGGRVLWLAGVIGAFVTGIYIFRAVFIAFFGEEHTHVSGSYGWRVIVPLVVLSVLSLVGGFIELPPA FGHVTLLSRLLAPVLPPTREVTDMTPLLLASAASILGIALAAVLYWRPSRPPAETPLWRFWHAAAGFDALYDRLLVRPVI WAARVDRDDFIDSFYDGIAWATQAIHRAIRRTQTGRVRLYAASLAIGSVGLIAIAVLR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=487, Percent_Identity=34.0862422997947, Blast_Score=242, Evalue=1e-63, Organism=Escherichia coli, GI1788614, Length=617, Percent_Identity=50.4051863857374, Blast_Score=548, Evalue=1e-157, Organism=Escherichia coli, GI1788829, Length=343, Percent_Identity=34.402332361516, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1788827, Length=355, Percent_Identity=34.3661971830986, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1788831, Length=343, Percent_Identity=29.7376093294461, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1788613, Length=394, Percent_Identity=27.4111675126904, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI2367154, Length=352, Percent_Identity=26.4204545454545, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI145693160, Length=272, Percent_Identity=26.8382352941176, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 66403; Mature: 66403
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHFLWLVPALPLLGSIVLMLGTGRLSHRAEALIGVLSVGLAAVVAFAIAGAFLLDPPAG CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAYQQSLWRWFAVGHFSFGIALRVDPLSLLMMLVTSGVGFLIHLFSTEFMEGEEGYGRFF HHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH AYLNLFVAAMLLLVMADNFLVLYAGWEGVGLCSYLLIGFWWRDPANGLAARKAFIVTRVG HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECC DTAFLIGLLLIASRLGTLNIAGAMDAASRTWHPGSPAATLIAFLLLGGAVGKSAQLPLQT HHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH WLPDAMAGPTPVSALIHAATMVTAGVYLIARTHVLFLLAPAAEITVGIVGAATLLLAGFS CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALAQNDIKRILAYSTMSQIGYMFLALGVGAWRAAMFHFMTHAFFKALLFLSAGAVTMRLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEC HEQDIYRMGGLARRLPAAFWSFLIGSAALAALPLITSGFYSKEAILSGAWADGNGGRVLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEH LAGVIGAFVTGIYIFRAVFIAFFGEEHTHVSGSYGWRVIVPLVVLSVLSLVGGFIELPPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCC FGHVTLLSRLLAPVLPPTREVTDMTPLLLASAASILGIALAAVLYWRPSRPPAETPLWRF CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH WHAAAGFDALYDRLLVRPVIWAARVDRDDFIDSFYDGIAWATQAIHRAIRRTQTGRVRLY HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AASLAIGSVGLIAIAVLR EEHHHHHHHHHHHHHHCC >Mature Secondary Structure MQHFLWLVPALPLLGSIVLMLGTGRLSHRAEALIGVLSVGLAAVVAFAIAGAFLLDPPAG CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAYQQSLWRWFAVGHFSFGIALRVDPLSLLMMLVTSGVGFLIHLFSTEFMEGEEGYGRFF HHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHH AYLNLFVAAMLLLVMADNFLVLYAGWEGVGLCSYLLIGFWWRDPANGLAARKAFIVTRVG HHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHEEEEECC DTAFLIGLLLIASRLGTLNIAGAMDAASRTWHPGSPAATLIAFLLLGGAVGKSAQLPLQT HHHHHHHHHHHHHHCCCEEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHH WLPDAMAGPTPVSALIHAATMVTAGVYLIARTHVLFLLAPAAEITVGIVGAATLLLAGFS CCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ALAQNDIKRILAYSTMSQIGYMFLALGVGAWRAAMFHFMTHAFFKALLFLSAGAVTMRLH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEC HEQDIYRMGGLARRLPAAFWSFLIGSAALAALPLITSGFYSKEAILSGAWADGNGGRVLW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEEH LAGVIGAFVTGIYIFRAVFIAFFGEEHTHVSGSYGWRVIVPLVVLSVLSLVGGFIELPPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHCCCCC FGHVTLLSRLLAPVLPPTREVTDMTPLLLASAASILGIALAAVLYWRPSRPPAETPLWRF CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH WHAAAGFDALYDRLLVRPVIWAARVDRDDFIDSFYDGIAWATQAIHRAIRRTQTGRVRLY HHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AASLAIGSVGLIAIAVLR EEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7690854; 9205837; 9278503 [H]