| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260073
Identifier: 148260073
GI number: 148260073
Start: 1188623
End: 1189396
Strand: Reverse
Name: 148260073
Synonym: Acry_1065
Alternate gene names: NA
Gene position: 1189396-1188623 (Counterclockwise)
Preceding gene: 148260084
Following gene: 148260072
Centisome position: 35.09
GC content: 69.12
Gene sequence:
>774_bases ATGCCATTCATAACGGCAGCGGACGGAGGAACGTTTCGTGACATCAGACCGAATTCCGCCTCGCGACGCCGCGACGGGCC CATGAGCAGGTCGATTGCCGCCGGCCTGCGGTATCCAAGGCTCGTGGGTTTCCTCGGCTTCTGCGTGGTCTTCGCCGCCC TCTGGGCCGGCGGGCTGGTCGCCACCGTCCGGCCGATCGGCGGGTCCGCCGCCGGCGACAGCCATCCCTCCGCCGGGCTG GCCTTCAAGCCGGACGCCTATGTCGCGCGGATCTGGGGAACGCGCGTGGTGCCGGACGCGCGGCGCGAAAGCGCCAATCT CGCCACCGTGCTCGCCGCGCTGGCGAAGGACAAGGGCGCGGCCCTGGCGCGGTACGGCCACAAGGTCGCCAGCACCTACA ACATTCTGGTGCGCTTCACCGGCACGGTGGGCAGGGTGGATACCTCGTCGCCGATCGGGACGATGCGGGTGACCGTGGCG GGAGCGAGCCCGGTGGCCGTGAAGGTCGCGACCGGGCCGGTGATTCTTGGCACCACGCTGCGCGACGCGCTGAAGTTCAT CAGCTTCGGCGAGTTCCTCAACCAGATCCAGTACGGCGACGTCGCCGACGCGCTCAACAGCCGCGTGGTGAAGACGGTCG TCGCGCCGCTCGACCTCGCGAAGCTGAAGGGGCGGAGCGTGACCGTCTACGGCGCCTGGACCTATGACGACGGCGATCCG TCCGACATCACGGTGACGCCGGTGATCATCGAGGCCGGAAAGGCGGGCGGATGA
Upstream 100 bases:
>100_bases ATCCCCGTCGTCCCGAAGGCGCAGCGGGGTCGGCGGACGGAATGCAGCCAGGCCCCTCTTGATGGTATGATGACTATGTG ACATCTTCCCGGCACCGTAA
Downstream 100 bases:
>100_bases GCGCGCCGGTCTTCCAGGCCGAGAGCGTGACCAAGGCGTTTCCCGGCACGCTGGCGCTGGATCGCGTCGATTTCGCGGCC CATGCCGGTGCCGTGAACAT
Product: periplasmic lipoprotein-like protein
Products: NA
Alternate protein names: Periplasmic Lipoprotein-Like Protein; Lipoprotein
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPFITAADGGTFRDIRPNSASRRRDGPMSRSIAAGLRYPRLVGFLGFCVVFAALWAGGLVATVRPIGGSAAGDSHPSAGL AFKPDAYVARIWGTRVVPDARRESANLATVLAALAKDKGAALARYGHKVASTYNILVRFTGTVGRVDTSSPIGTMRVTVA GASPVAVKVATGPVILGTTLRDALKFISFGEFLNQIQYGDVADALNSRVVKTVVAPLDLAKLKGRSVTVYGAWTYDDGDP SDITVTPVIIEAGKAGG
Sequences:
>Translated_257_residues MPFITAADGGTFRDIRPNSASRRRDGPMSRSIAAGLRYPRLVGFLGFCVVFAALWAGGLVATVRPIGGSAAGDSHPSAGL AFKPDAYVARIWGTRVVPDARRESANLATVLAALAKDKGAALARYGHKVASTYNILVRFTGTVGRVDTSSPIGTMRVTVA GASPVAVKVATGPVILGTTLRDALKFISFGEFLNQIQYGDVADALNSRVVKTVVAPLDLAKLKGRSVTVYGAWTYDDGDP SDITVTPVIIEAGKAGG >Mature_256_residues PFITAADGGTFRDIRPNSASRRRDGPMSRSIAAGLRYPRLVGFLGFCVVFAALWAGGLVATVRPIGGSAAGDSHPSAGLA FKPDAYVARIWGTRVVPDARRESANLATVLAALAKDKGAALARYGHKVASTYNILVRFTGTVGRVDTSSPIGTMRVTVAG ASPVAVKVATGPVILGTTLRDALKFISFGEFLNQIQYGDVADALNSRVVKTVVAPLDLAKLKGRSVTVYGAWTYDDGDPS DITVTPVIIEAGKAGG
Specific function: Unknown
COG id: COG5618
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26778; Mature: 26647
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFITAADGGTFRDIRPNSASRRRDGPMSRSIAAGLRYPRLVGFLGFCVVFAALWAGGLV CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE ATVRPIGGSAAGDSHPSAGLAFKPDAYVARIWGTRVVPDARRESANLATVLAALAKDKGA EEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCH ALARYGHKVASTYNILVRFTGTVGRVDTSSPIGTMRVTVAGASPVAVKVATGPVILGTTL HHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEECHHH RDALKFISFGEFLNQIQYGDVADALNSRVVKTVVAPLDLAKLKGRSVTVYGAWTYDDGDP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC SDITVTPVIIEAGKAGG CCEEEEEEEEECCCCCC >Mature Secondary Structure PFITAADGGTFRDIRPNSASRRRDGPMSRSIAAGLRYPRLVGFLGFCVVFAALWAGGLV CEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEE ATVRPIGGSAAGDSHPSAGLAFKPDAYVARIWGTRVVPDARRESANLATVLAALAKDKGA EEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCH ALARYGHKVASTYNILVRFTGTVGRVDTSSPIGTMRVTVAGASPVAVKVATGPVILGTTL HHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEECHHH RDALKFISFGEFLNQIQYGDVADALNSRVVKTVVAPLDLAKLKGRSVTVYGAWTYDDGDP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC SDITVTPVIIEAGKAGG CCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA