Click here to switch to the map view.

The map label for this gene is yrbE [H]

Identifier: 148260069

GI number: 148260069

Start: 1183832

End: 1184887

Strand: Reverse

Name: yrbE [H]

Synonym: Acry_1061

Alternate gene names: 148260069

Gene position: 1184887-1183832 (Counterclockwise)

Preceding gene: 148260070

Following gene: 148260065

Centisome position: 34.96

GC content: 71.59

Gene sequence:

>1056_bases
ATGCTCAACGGGGCGCTGATCGGCTGCGGCTTCTTCGCGCAGAACCAGCTTCGGGCCTGGGCGGAGGCCGGCGATGCCGG
CATCGTCGCCCTGTGCGACCGGGATGCGGCGCGGCTTGCGGCAACCGCGGCGCGCTTCGGCATCGCCCGCACCTATGACG
ACGCGGCGGAGATGCTCGCCCGCGAGCGGCCCGACTTCGTCGACATCGCGACCACGGTGGCCTCCCACGTGCCGCTGGTG
ACGCTGGCGGCGCGCGCCGGCGTGCCGGTGATCTGCCAGAAGCCGTTCACCGAAACGCTTGCCGAGGCGGCGGAGCTGGT
CGAGACTTGCCGGCGGGCGGGCGTGAAGCTGATGGTGCACGAGAATTTCCGCTGGCAGGCGCCGATCCGCGCGGTGCGCC
GCGTGCTCGATGAAGGCGAGATCGGCCAGCCGTTCTGGGCGCGCATCGCCTTCCGCTCGGCCTATGACGTGTATGCCGGA
CAGCCCTATCTGGCCGAGGGATCGCGCTTCATCATCCAGGATCTCGGCATACACCTGCTCGATGTCGCGCGGTTTCTGTT
TGGCGAGGTGACGACCCTGGCGGCGCGGACCCAGCGGGTGAATCCCCGCATCGCCGGCGAGGACGTGGCGACGATGATGC
TCGGCCACGCGGCGGGGGTGACGACGGTCGTCGATTGCAGCTACGCCAGCGCGCAGGAGCGCGAGCTGTTTCCGCAGAGC
CTGATCGAGATCGACGGGGCGCGCGGCACGCTCCGGCTCGGCGCCGATTACGAACTCGTCGTGCACGCCGATGGCGCGAC
GCGGCGCGAGACCGTCGCCCCCGACGAGGCGCGCTGGGGACCGGCGCCCTGGCACGGCATTCAGCACAGCGTGTTCGACA
TCCAGGAGCATTTCATCGCGTGCCTGCGCGGCGGGCGCGAACCGGAAACCTCGGGGGCGGACAATCTCCGCACCCTCGCG
CTGGTCGAGGCGGCCTATCTGTCGGCGCAGCGCGGCGGCGCGCCGGTCGATCCCGCCGCGCTCGTGGCGGCGGCGCGGGA
CGAGGCCGGGGGCTGA

Upstream 100 bases:

>100_bases
GAAATCGAAATCCTGAGCTGGCGGCTCGGCAACCACCCGGCGGCCCTTCGCGGGGCCGCCGGCAAAAATCGATCTGAACA
CCGACGGAACGGGGCGGCGA

Downstream 100 bases:

>100_bases
CCCGAAAGGGGAGGAGACTGGCTCGGGCGCGGTCGCCGGCTGCCGCGGAGGTTGTCAGCCGGTGGCGAGCGGCGCCTCTC
CCATGCGGCTCAACGCGGCG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MLNGALIGCGFFAQNQLRAWAEAGDAGIVALCDRDAARLAATAARFGIARTYDDAAEMLARERPDFVDIATTVASHVPLV
TLAARAGVPVICQKPFTETLAEAAELVETCRRAGVKLMVHENFRWQAPIRAVRRVLDEGEIGQPFWARIAFRSAYDVYAG
QPYLAEGSRFIIQDLGIHLLDVARFLFGEVTTLAARTQRVNPRIAGEDVATMMLGHAAGVTTVVDCSYASAQERELFPQS
LIEIDGARGTLRLGADYELVVHADGATRRETVAPDEARWGPAPWHGIQHSVFDIQEHFIACLRGGREPETSGADNLRTLA
LVEAAYLSAQRGGAPVDPAALVAAARDEAGG

Sequences:

>Translated_351_residues
MLNGALIGCGFFAQNQLRAWAEAGDAGIVALCDRDAARLAATAARFGIARTYDDAAEMLARERPDFVDIATTVASHVPLV
TLAARAGVPVICQKPFTETLAEAAELVETCRRAGVKLMVHENFRWQAPIRAVRRVLDEGEIGQPFWARIAFRSAYDVYAG
QPYLAEGSRFIIQDLGIHLLDVARFLFGEVTTLAARTQRVNPRIAGEDVATMMLGHAAGVTTVVDCSYASAQERELFPQS
LIEIDGARGTLRLGADYELVVHADGATRRETVAPDEARWGPAPWHGIQHSVFDIQEHFIACLRGGREPETSGADNLRTLA
LVEAAYLSAQRGGAPVDPAALVAAARDEAGG
>Mature_351_residues
MLNGALIGCGFFAQNQLRAWAEAGDAGIVALCDRDAARLAATAARFGIARTYDDAAEMLARERPDFVDIATTVASHVPLV
TLAARAGVPVICQKPFTETLAEAAELVETCRRAGVKLMVHENFRWQAPIRAVRRVLDEGEIGQPFWARIAFRSAYDVYAG
QPYLAEGSRFIIQDLGIHLLDVARFLFGEVTTLAARTQRVNPRIAGEDVATMMLGHAAGVTTVVDCSYASAQERELFPQS
LIEIDGARGTLRLGADYELVVHADGATRRETVAPDEARWGPAPWHGIQHSVFDIQEHFIACLRGGREPETSGADNLRTLA
LVEAAYLSAQRGGAPVDPAALVAAARDEAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=193, Percent_Identity=29.0155440414508, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081947, Length=218, Percent_Identity=27.0642201834862, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=268, Percent_Identity=24.2537313432836, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37805; Mature: 37805

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGALIGCGFFAQNQLRAWAEAGDAGIVALCDRDAARLAATAARFGIARTYDDAAEMLA
CCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH
RERPDFVDIATTVASHVPLVTLAARAGVPVICQKPFTETLAEAAELVETCRRAGVKLMVH
HCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCEEEEEE
ENFRWQAPIRAVRRVLDEGEIGQPFWARIAFRSAYDVYAGQPYLAEGSRFIIQDLGIHLL
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
DVARFLFGEVTTLAARTQRVNPRIAGEDVATMMLGHAAGVTTVVDCSYASAQERELFPQS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCHHH
LIEIDGARGTLRLGADYELVVHADGATRRETVAPDEARWGPAPWHGIQHSVFDIQEHFIA
HHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
CLRGGREPETSGADNLRTLALVEAAYLSAQRGGAPVDPAALVAAARDEAGG
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNGALIGCGFFAQNQLRAWAEAGDAGIVALCDRDAARLAATAARFGIARTYDDAAEMLA
CCCCEEEECHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHH
RERPDFVDIATTVASHVPLVTLAARAGVPVICQKPFTETLAEAAELVETCRRAGVKLMVH
HCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCEEEEEE
ENFRWQAPIRAVRRVLDEGEIGQPFWARIAFRSAYDVYAGQPYLAEGSRFIIQDLGIHLL
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
DVARFLFGEVTTLAARTQRVNPRIAGEDVATMMLGHAAGVTTVVDCSYASAQERELFPQS
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCHHH
LIEIDGARGTLRLGADYELVVHADGATRRETVAPDEARWGPAPWHGIQHSVFDIQEHFIA
HHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
CLRGGREPETSGADNLRTLALVEAAYLSAQRGGAPVDPAALVAAARDEAGG
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]