| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259902
Identifier: 148259902
GI number: 148259902
Start: 981202
End: 981669
Strand: Reverse
Name: 148259902
Synonym: Acry_0891
Alternate gene names: NA
Gene position: 981669-981202 (Counterclockwise)
Preceding gene: 148259903
Following gene: 148259901
Centisome position: 28.96
GC content: 76.92
Gene sequence:
>468_bases ATGCCCTCGCCCACTGAGCCCGCGCCCACTGAGCCCGCGCCTGACGATCGCGGCTACACGCTGCTCGAACTGCTCGTCGT CGTCGTCATTCTCGGCCTCGCCCTCACGCTCGCCGCCAATGCGGCACCCTGGCGGCGCATCGGCCAGGGCCCCGCAACCG CCGCCGCCACCCTCGCCGGGGCGCTGCGCACCGCCCGCGCCGTCGCGATCGCCACCGGCCGGCCCGCCACCTTCGCGATC GAGCCGGCGGACGGGCGCTGGGTCGGCCCCACCGCTTCGGGGCGGCTGCCGCGCGGCCTCGCCATCGCCTTTCACGGCCC GGTCGCGCGCGGCTGGGGGCGGATCGTCTTCTCCCCCGATGGCAGCGCGACCGGAGGGCAGGTGCTGCTCGCGCGCGGCG CCGCGCGGGCGCTCGTGGCGGTGGACTGGCTGACCGGACGGATCAGCACCGATGTCCCGGCACGATAG
Upstream 100 bases:
>100_bases CAGAAGCTGGTCTCGCTGCTGGTTCCCGCCATCACCATCGTGATGGGCGGCGCGATCGGCTTCATCGTCGCCTCGCTGCT GCTGGCCATGCTCGGTCTCG
Downstream 100 bases:
>100_bases CGGCTTCATCCTGCTCGAAACCCTGGTCGCCTTCGTCATCGCGGCGCTGGCGGTCGCGGTGCTCTACCGCGCCGCCTTCG ATGGCGCGGCGGGCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPSPTEPAPTEPAPDDRGYTLLELLVVVVILGLALTLAANAAPWRRIGQGPATAAATLAGALRTARAVAIATGRPATFAI EPADGRWVGPTASGRLPRGLAIAFHGPVARGWGRIVFSPDGSATGGQVLLARGAARALVAVDWLTGRISTDVPAR
Sequences:
>Translated_155_residues MPSPTEPAPTEPAPDDRGYTLLELLVVVVILGLALTLAANAAPWRRIGQGPATAAATLAGALRTARAVAIATGRPATFAI EPADGRWVGPTASGRLPRGLAIAFHGPVARGWGRIVFSPDGSATGGQVLLARGAARALVAVDWLTGRISTDVPAR >Mature_154_residues PSPTEPAPTEPAPDDRGYTLLELLVVVVILGLALTLAANAAPWRRIGQGPATAAATLAGALRTARAVAIATGRPATFAIE PADGRWVGPTASGRLPRGLAIAFHGPVARGWGRIVFSPDGSATGGQVLLARGAARALVAVDWLTGRISTDVPAR
Specific function: Unknown
COG id: COG4970
COG function: function code NU; Tfp pilus assembly protein FimT
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15785; Mature: 15654
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPTEPAPTEPAPDDRGYTLLELLVVVVILGLALTLAANAAPWRRIGQGPATAAATLAG CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH ALRTARAVAIATGRPATFAIEPADGRWVGPTASGRLPRGLAIAFHGPVARGWGRIVFSPD HHHHHHEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCC GSATGGQVLLARGAARALVAVDWLTGRISTDVPAR CCCCCCEEEEECCCCCEEEEEEHHHCCCCCCCCCC >Mature Secondary Structure PSPTEPAPTEPAPDDRGYTLLELLVVVVILGLALTLAANAAPWRRIGQGPATAAATLAG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHH ALRTARAVAIATGRPATFAIEPADGRWVGPTASGRLPRGLAIAFHGPVARGWGRIVFSPD HHHHHHEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCC GSATGGQVLLARGAARALVAVDWLTGRISTDVPAR CCCCCCEEEEECCCCCEEEEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA