| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259783
Identifier: 148259783
GI number: 148259783
Start: 862613
End: 862954
Strand: Reverse
Name: 148259783
Synonym: Acry_0771
Alternate gene names: NA
Gene position: 862954-862613 (Counterclockwise)
Preceding gene: 148259784
Following gene: 148259782
Centisome position: 25.46
GC content: 73.39
Gene sequence:
>342_bases ATGGGGCTGTGCTATCCGGGACGGCTGGCGCGCGGCGGCGACGCCCCGCCGCGGCCGGAATGTGGCAGGCTCTGGCAGGG GCGGCTGCGCGCGGCGATGCCGGCGATCCGCCTCACGCTGCTGGTCGGCAGCCACGCGATTCTCTATCATCTCGGCAAGG GGGCGATGGAGGAACGGGTGCGGGGTTTTGGGGCGTTCCTGCCGGAGCGGTTTCCGCTGCCGCATCCCTCCTGGCGGACA CGGGCCTGGGCGGCGCGGCGGCCCTGGTTCGAGACCGAGGTGATCCCCGCCCTGCGCGCCGCCTTCGCCGCCGCCCTCTC GGAGCAAGGAGACACGACATGA
Upstream 100 bases:
>100_bases TGACATTCCCTGGAACGATCCCTCGGGCGACCGGCTGCGCGACTGGCTCGGCATCGACCGGGCCACGTTCTACGACGAAA GCCGGATCGCGATCGTGCCG
Downstream 100 bases:
>100_bases TCCCCCGCCTGACCGATGCCGAACGCGCCGCCCTTGTCGACCTCTTGCCGGAATGGTCGCTGGCGAAGGACCGCGACGCG ATCGAACGGCGCTTCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MGLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGAMEERVRGFGAFLPERFPLPHPSWRT RAWAARRPWFETEVIPALRAAFAAALSEQGDTT
Sequences:
>Translated_113_residues MGLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGAMEERVRGFGAFLPERFPLPHPSWRT RAWAARRPWFETEVIPALRAAFAAALSEQGDTT >Mature_112_residues GLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGAMEERVRGFGAFLPERFPLPHPSWRTR AWAARRPWFETEVIPALRAAFAAALSEQGDTT
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: NA
Molecular weight: Translated: 12534; Mature: 12403
Theoretical pI: Translated: 11.46; Mature: 11.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGAMEERV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH RGFGAFLPERFPLPHPSWRTRAWAARRPWFETEVIPALRAAFAAALSEQGDTT HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GLCYPGRLARGGDAPPRPECGRLWQGRLRAAMPAIRLTLLVGSHAILYHLGKGAMEERV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHH RGFGAFLPERFPLPHPSWRTRAWAARRPWFETEVIPALRAAFAAALSEQGDTT HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]