| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is argH
Identifier: 148259757
GI number: 148259757
Start: 835485
End: 836900
Strand: Reverse
Name: argH
Synonym: Acry_0745
Alternate gene names: 148259757
Gene position: 836900-835485 (Counterclockwise)
Preceding gene: 148259762
Following gene: 148259756
Centisome position: 24.69
GC content: 69.49
Gene sequence:
>1416_bases ATGACGAATTCTGGTGCCGATCAGGCCGGAACGCAACCATCCCGCCTGCAATGGGGCGGACGATTTGCCGCCGGTCCCGC ATCCGTGATGCAGGCGATCAATGCCTCGATCGGGTTCGATCAGCGGCTCTGGCGGGAGGATATCGAAGGCAGCCTCGCCC ATGCCGGCATGCTCGCCGCGATGGGAATCATCTCCGCCGAGGACGAGGCGGCGATCCGCGCCGGACTCGCCGAGATCGCC GAGGCGATCGCCGAGGGGTCGTTCACCTTCGATCCCGCGCTCGAGGACATCCACACCAATATCGAGGCCTGGCTGGTCGC GCGCATCGGCGAGGCCGGGCGCCGGCTGCACACCGCGCGCAGCCGCAACGACCAGGTGGCGACCGATTTCCGCCTCTGGG TGCGCAACGCGATCGACAGTCTCGACGGCCAGGTGCGCGAGCTGATGCGCGCGCTGGCCGACCGCGCGGCCGAACACGCG GCCACCATCATGCCTGGCTTCACCCATCTGCAGACCGCCCAGCCGGTGACGCTCGGGCATCACCTGCTCGCCTATGTCGA GATGCTGTCGCGCGACCGCGGCCGCCTCGCCGATGCGCGCCGGCGGCTGAACGAATGCCCGCTCGGCGCGGCCGCCCTCG CCGGCACCACCTTCCCGATCGACCGCAGCATGACCGCCGCCGCCCTCGGCTTCGACCGGCCGACCGCGAATTCGCTCGAT TCGGTCTCGGACCGCGACTTCGCGCTTGAATTCCTCTCCGCCCTCTCCATCCTCGCGATGCATCTTTCGCGTTTCGCCGA GGAGATCATCATCTGGACCAGCGCGCCCTATCGCTTCATCCGGCTGTCCGACGCCTATACCACCGGCTCGTCGATCATGC CGCAGAAGCGCAACCCGGACGCCGCCGAACTCGCCCGCGCCAAGGCCGGGCGGATCTTCGGGGCGCTCACCGGCCTGCTC GCGGTGATGAAGGGCCTGCCGCTCGCCTATGCGAAGGACATGCAGGAGGACAAGGAGCCGGTGTTCGACGCCGCCGATGC CGCCGAACTCTGCCTCGCCGCGATGACCGGCATGGTGCGCGACATGATGCCGGACGTGCTGCGGATGCGATCCGTGGCCG GCGCCGATTTCTCGACCGCGACCGATCTTGCAGACTACCTCGTGCGCGATCTCGGCCTGCCCTTCCGCACCGCCCATCAC GTCACCGGCCGGATCGTGAGCGAGGCCGAGTCGCGCGGGCTCGAGCTCGTCGCCCTGCCGCTCTCGGTCATGCAGGAGGT CGAGCCGCGGATCACCGAGGCGGTGTATGATGTGCTGACCATCGAGGCCTCGGTCGCCGCCCGCCGCACCCTCGGCGGCA CCGCGCCCGACAATGTCGCCCGCGCCGCCGCGCGCTGGCAGGAGACGCTGGCATGA
Upstream 100 bases:
>100_bases CGAAGTTAAGTCAGGCAGCACAAGACCCGCACCCAGAGCCGCGAACTGCCGCCGAGAAAGCCCGAAACGCATGACCGCCG ATACCTCTTCCAAACCGAAT
Downstream 100 bases:
>100_bases CCCGCTCGCTGCTGCTCGTCCTGCTCGCCTGCGCCGCTCTCGCCGCCTGCGGCCGGGCCGGCGCGCCCTCGCCGCCCGGC CCGGCGAGCCAGGTGATCTA
Product: argininosuccinate lyase
Products: NA
Alternate protein names: ASAL; Arginosuccinase
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MTNSGADQAGTQPSRLQWGGRFAAGPASVMQAINASIGFDQRLWREDIEGSLAHAGMLAAMGIISAEDEAAIRAGLAEIA EAIAEGSFTFDPALEDIHTNIEAWLVARIGEAGRRLHTARSRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHA ATIMPGFTHLQTAQPVTLGHHLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTANSLD SVSDRDFALEFLSALSILAMHLSRFAEEIIIWTSAPYRFIRLSDAYTTGSSIMPQKRNPDAAELARAKAGRIFGALTGLL AVMKGLPLAYAKDMQEDKEPVFDAADAAELCLAAMTGMVRDMMPDVLRMRSVAGADFSTATDLADYLVRDLGLPFRTAHH VTGRIVSEAESRGLELVALPLSVMQEVEPRITEAVYDVLTIEASVAARRTLGGTAPDNVARAAARWQETLA
Sequences:
>Translated_471_residues MTNSGADQAGTQPSRLQWGGRFAAGPASVMQAINASIGFDQRLWREDIEGSLAHAGMLAAMGIISAEDEAAIRAGLAEIA EAIAEGSFTFDPALEDIHTNIEAWLVARIGEAGRRLHTARSRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHA ATIMPGFTHLQTAQPVTLGHHLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTANSLD SVSDRDFALEFLSALSILAMHLSRFAEEIIIWTSAPYRFIRLSDAYTTGSSIMPQKRNPDAAELARAKAGRIFGALTGLL AVMKGLPLAYAKDMQEDKEPVFDAADAAELCLAAMTGMVRDMMPDVLRMRSVAGADFSTATDLADYLVRDLGLPFRTAHH VTGRIVSEAESRGLELVALPLSVMQEVEPRITEAVYDVLTIEASVAARRTLGGTAPDNVARAAARWQETLA >Mature_470_residues TNSGADQAGTQPSRLQWGGRFAAGPASVMQAINASIGFDQRLWREDIEGSLAHAGMLAAMGIISAEDEAAIRAGLAEIAE AIAEGSFTFDPALEDIHTNIEAWLVARIGEAGRRLHTARSRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHAA TIMPGFTHLQTAQPVTLGHHLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTANSLDS VSDRDFALEFLSALSILAMHLSRFAEEIIIWTSAPYRFIRLSDAYTTGSSIMPQKRNPDAAELARAKAGRIFGALTGLLA VMKGLPLAYAKDMQEDKEPVFDAADAAELCLAAMTGMVRDMMPDVLRMRSVAGADFSTATDLADYLVRDLGLPFRTAHHV TGRIVSEAESRGLELVALPLSVMQEVEPRITEAVYDVLTIEASVAARRTLGGTAPDNVARAAARWQETLA
Specific function: Arginine biosynthesis; eighth (last) step. [C]
COG id: COG0165
COG function: function code E; Argininosuccinate lyase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Homologues:
Organism=Homo sapiens, GI31541964, Length=450, Percent_Identity=43.3333333333333, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI68303542, Length=450, Percent_Identity=43.3333333333333, Blast_Score=372, Evalue=1e-103, Organism=Homo sapiens, GI68303547, Length=450, Percent_Identity=40.8888888888889, Blast_Score=338, Evalue=7e-93, Organism=Homo sapiens, GI68303549, Length=450, Percent_Identity=40.8888888888889, Blast_Score=337, Evalue=2e-92, Organism=Escherichia coli, GI1790398, Length=449, Percent_Identity=47.4387527839644, Blast_Score=400, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6321806, Length=447, Percent_Identity=42.2818791946309, Blast_Score=357, Evalue=2e-99, Organism=Drosophila melanogaster, GI221473854, Length=443, Percent_Identity=40.6320541760722, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI78706858, Length=443, Percent_Identity=40.6320541760722, Blast_Score=343, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARLY_ACICJ (A5FWI3)
Other databases:
- EMBL: CP000697 - RefSeq: YP_001233884.1 - ProteinModelPortal: A5FWI3 - SMR: A5FWI3 - STRING: A5FWI3 - GeneID: 5160356 - GenomeReviews: CP000697_GR - KEGG: acr:Acry_0745 - eggNOG: COG0165 - HOGENOM: HBG539632 - OMA: MAEDLIF - ProtClustDB: PRK00855 - BioCyc: ACRY349163:ACRY_0745-MONOMER - GO: GO:0005737 - HAMAP: MF_00006 - InterPro: IPR009049 - InterPro: IPR003031 - InterPro: IPR000362 - InterPro: IPR020557 - InterPro: IPR008948 - InterPro: IPR022761 - PANTHER: PTHR11444:SF3 - PRINTS: PR00145 - PRINTS: PR00149 - TIGRFAMs: TIGR00838
Pfam domain/function: PF00206 Lyase_1; SSF48557 L-Aspartase-like
EC number: =4.3.2.1
Molecular weight: Translated: 50854; Mature: 50723
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00163 FUMARATE_LYASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSGADQAGTQPSRLQWGGRFAAGPASVMQAINASIGFDQRLWREDIEGSLAHAGMLAA CCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH MGIISAEDEAAIRAGLAEIAEAIAEGSFTFDPALEDIHTNIEAWLVARIGEAGRRLHTAR HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHAATIMPGFTHLQTAQPVTLGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHH HLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTANSLD HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC SVSDRDFALEFLSALSILAMHLSRFAEEIIIWTSAPYRFIRLSDAYTTGSSIMPQKRNPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCC AAELARAKAGRIFGALTGLLAVMKGLPLAYAKDMQEDKEPVFDAADAAELCLAAMTGMVR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DMMPDVLRMRSVAGADFSTATDLADYLVRDLGLPFRTAHHVTGRIVSEAESRGLELVALP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHH LSVMQEVEPRITEAVYDVLTIEASVAARRTLGGTAPDNVARAAARWQETLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TNSGADQAGTQPSRLQWGGRFAAGPASVMQAINASIGFDQRLWREDIEGSLAHAGMLAA CCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH MGIISAEDEAAIRAGLAEIAEAIAEGSFTFDPALEDIHTNIEAWLVARIGEAGRRLHTAR HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNDQVATDFRLWVRNAIDSLDGQVRELMRALADRAAEHAATIMPGFTHLQTAQPVTLGH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHH HLLAYVEMLSRDRGRLADARRRLNECPLGAAALAGTTFPIDRSMTAAALGFDRPTANSLD HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC SVSDRDFALEFLSALSILAMHLSRFAEEIIIWTSAPYRFIRLSDAYTTGSSIMPQKRNPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCC AAELARAKAGRIFGALTGLLAVMKGLPLAYAKDMQEDKEPVFDAADAAELCLAAMTGMVR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DMMPDVLRMRSVAGADFSTATDLADYLVRDLGLPFRTAHHVTGRIVSEAESRGLELVALP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEHH LSVMQEVEPRITEAVYDVLTIEASVAARRTLGGTAPDNVARAAARWQETLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA