| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is ydjH [C]
Identifier: 148259699
GI number: 148259699
Start: 772259
End: 773296
Strand: Reverse
Name: ydjH [C]
Synonym: Acry_0686
Alternate gene names: 148259699
Gene position: 773296-772259 (Counterclockwise)
Preceding gene: 148259700
Following gene: 148259691
Centisome position: 22.82
GC content: 72.74
Gene sequence:
>1038_bases ATGAGCGACATGGCGCGACGTGGCTTCGTCACCGGCGGGACCTGGTGCGTCGACCGCAACCGTGTGGTCGAGTTCTGGCC GGGCGAGGACGGCCTCGTCGAAATCCTGGAGGAACAGGCGCGCGGCGGCGGCTCGGCGTGCAACCTCGCCCTTGGCATCC GGCGGCTCGACGCCGGCATGCCCGTGGAGACCATCGGCGTGGTGGGCGATGACGAAAACGGCCGCCTGCTGCATGCCGCG GCCGCGGCGCACGGCATCGACGCAACCGGGCTCACCGTCGTCGCGGGCGCGCCGACGCAGTTCACCGACGCCTACACCTC GCGCCGGAGCGGACGGCGGACGCACATCTTCCGGGCCGGCGCCGCCGATGCGCTCACCCCCGATCATTTCGACTTCGCCG CCACCCGCGGCCGCATCCTGCATCTCGGCCTGCCCGGCATCCACGCGCGGATGGACGGCGCCTGGGGCGACGCCGCGAAC GGCTGGGTCGCGACCCTGCGCAAGGCGCGGCGGGCCGGGCTGCTGACGAATCTCGAACTGTGCAGCGTTCCGGCCGAACG CCTCGCCGCGCTGGTGCGGCCCTGCCTGCCGGAACTCGATCTGCTGGTGGTCAACGACGTCGAGATCGGCGCGATCGCCG GCATGGCGACATGCGACCATGGAGAGACCGACATCGCAGCCTGCCTGCGCGCCGCGCGCGCGGTTCTGGCCAGCGGCGCG ATGCGGCTCGTGGCCGTGCATTTCCCGCGCGGCGCCATCGCGGTCGCGCGCGACGGAACGGTTGCCGCGAAGGCGTCGGT CCGCGTGCCGGAGGCGGAGATCGCCGGCGCCAATGGTGCCGGCGACGCGTTCGCCTCAGGTTTTCTCTACGGTTTTCACG AGGGCTGGGAGACCGCGCGCGCCCTCGCCCTCGCCCACGCCGCGGCGGCCGTCTCGCTGCGCAGCATCGGCACGACCGAT GCGATCGAGGCCTGGCAGGACTGCCTCGACATCGCCTGCCGGTGGGGATGGCGGGAGGAACTGACCGGTCTCGGCTGA
Upstream 100 bases:
>100_bases TATCACGGCACGTTGCAGGCACAGGGGATCGCGCCGACGCGCCCGCTCGCCGACGACCTGCTGATCACGGAAGCCCCCCT CAGGCAGCACTGACGCGCCC
Downstream 100 bases:
>100_bases TGCTCTAGTCGAGGTGTACCGGGTTCAGCACGCGGCGCAGGAAGCTCTGCGTCCGCGCCTCGCGCGGCGCGCCGATCACC GAGTCCGGCGGCCCCTGCTC
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: PfkB Domain Protein; PfkB Domain-Containing Protein; Kinase; Myo-Inositol Catabolism; Cytidine Kinase; PfkB Family Carbohydrate Kinase; PfkB Family Sugar Kinase; Kinase PfkB Family
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSDMARRGFVTGGTWCVDRNRVVEFWPGEDGLVEILEEQARGGGSACNLALGIRRLDAGMPVETIGVVGDDENGRLLHAA AAAHGIDATGLTVVAGAPTQFTDAYTSRRSGRRTHIFRAGAADALTPDHFDFAATRGRILHLGLPGIHARMDGAWGDAAN GWVATLRKARRAGLLTNLELCSVPAERLAALVRPCLPELDLLVVNDVEIGAIAGMATCDHGETDIAACLRAARAVLASGA MRLVAVHFPRGAIAVARDGTVAAKASVRVPEAEIAGANGAGDAFASGFLYGFHEGWETARALALAHAAAAVSLRSIGTTD AIEAWQDCLDIACRWGWREELTGLG
Sequences:
>Translated_345_residues MSDMARRGFVTGGTWCVDRNRVVEFWPGEDGLVEILEEQARGGGSACNLALGIRRLDAGMPVETIGVVGDDENGRLLHAA AAAHGIDATGLTVVAGAPTQFTDAYTSRRSGRRTHIFRAGAADALTPDHFDFAATRGRILHLGLPGIHARMDGAWGDAAN GWVATLRKARRAGLLTNLELCSVPAERLAALVRPCLPELDLLVVNDVEIGAIAGMATCDHGETDIAACLRAARAVLASGA MRLVAVHFPRGAIAVARDGTVAAKASVRVPEAEIAGANGAGDAFASGFLYGFHEGWETARALALAHAAAAVSLRSIGTTD AIEAWQDCLDIACRWGWREELTGLG >Mature_344_residues SDMARRGFVTGGTWCVDRNRVVEFWPGEDGLVEILEEQARGGGSACNLALGIRRLDAGMPVETIGVVGDDENGRLLHAAA AAHGIDATGLTVVAGAPTQFTDAYTSRRSGRRTHIFRAGAADALTPDHFDFAATRGRILHLGLPGIHARMDGAWGDAANG WVATLRKARRAGLLTNLELCSVPAERLAALVRPCLPELDLLVVNDVEIGAIAGMATCDHGETDIAACLRAARAVLASGAM RLVAVHFPRGAIAVARDGTVAAKASVRVPEAEIAGANGAGDAFASGFLYGFHEGWETARALALAHAAAAVSLRSIGTTDA IEAWQDCLDIACRWGWREELTGLG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36119; Mature: 35988
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMARRGFVTGGTWCVDRNRVVEFWPGEDGLVEILEEQARGGGSACNLALGIRRLDAGM CCCCHHCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCC PVETIGVVGDDENGRLLHAAAAAHGIDATGLTVVAGAPTQFTDAYTSRRSGRRTHIFRAG CEEEEEEEECCCCCCEEEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECC AADALTPDHFDFAATRGRILHLGLPGIHARMDGAWGDAANGWVATLRKARRAGLLTNLEL CCCCCCCCCCCHHHCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHH CSVPAERLAALVRPCLPELDLLVVNDVEIGAIAGMATCDHGETDIAACLRAARAVLASGA HCCCHHHHHHHHHHCCCCCCEEEECCCCCHHEECEEECCCCCHHHHHHHHHHHHHHHHCC MRLVAVHFPRGAIAVARDGTVAAKASVRVPEAEIAGANGAGDAFASGFLYGFHEGWETAR EEEEEEECCCCEEEEECCCCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALALAHAAAAVSLRSIGTTDAIEAWQDCLDIACRWGWREELTGLG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC >Mature Secondary Structure SDMARRGFVTGGTWCVDRNRVVEFWPGEDGLVEILEEQARGGGSACNLALGIRRLDAGM CCCHHCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCC PVETIGVVGDDENGRLLHAAAAAHGIDATGLTVVAGAPTQFTDAYTSRRSGRRTHIFRAG CEEEEEEEECCCCCCEEEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECC AADALTPDHFDFAATRGRILHLGLPGIHARMDGAWGDAANGWVATLRKARRAGLLTNLEL CCCCCCCCCCCHHHCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHH CSVPAERLAALVRPCLPELDLLVVNDVEIGAIAGMATCDHGETDIAACLRAARAVLASGA HCCCHHHHHHHHHHCCCCCCEEEECCCCCHHEECEEECCCCCHHHHHHHHHHHHHHHHCC MRLVAVHFPRGAIAVARDGTVAAKASVRVPEAEIAGANGAGDAFASGFLYGFHEGWETAR EEEEEEECCCCEEEEECCCCEEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALALAHAAAAVSLRSIGTTDAIEAWQDCLDIACRWGWREELTGLG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA