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The map label for this gene is yjiR [C]

Identifier: 148259691

GI number: 148259691

Start: 764754

End: 766151

Strand: Reverse

Name: yjiR [C]

Synonym: Acry_0678

Alternate gene names: 148259691

Gene position: 766151-764754 (Counterclockwise)

Preceding gene: 148259699

Following gene: 148259679

Centisome position: 22.61

GC content: 75.75

Gene sequence:

>1398_bases
ATGACGGACCGTGACATGCCCCCCGCCTGGCTGCCGGATATCCGCAAGCCGGACGGGCCGATCTATCTCGCGATCGCCGC
GGCGCTGGAGGCCGATATCCGGTCCGGCGCGCTGAGGCCGGGCGACCGCCTGCCGACCCAGCGCCGCCTCGCCGCCGCGA
TCGGGATCGATTTCACGACCGTCACCCGCGCCTATGCCGAGGCCGCGCGCCGCGGGCTGATCGAGGGCCGGGTGGGGCTC
GGCACCTATGTCAGGATTATCCCGCCGCCGCGCGCGGCCGCCACCGCCGGCGGCCTGATCGACATGAGCATGAACCTGCC
GCCGTGCTTCGACGACCCCGCGCTGGCGGCGCGCCTCTGGCGGGATGTCACGGCGCTCGGGGCGGAGGCCGGGCTCGACC
TGCTGCTGCGCTATCAGGATATCGGCGGCGCCATGGCCGACCGCGCCGCCGGCGCGCACTGGCTGCGTGACCGGATGGGC
CCGTTGCCGCCCGAGCGCGTGCTGCTCTGCCCCGGCGCGCAGGGCGCGTTGCTCGCGATCGCCGGCCTGCTCGCCGCGCC
TGGCGATGCCGTCTGCGTCGAGGATCTCACCTATCCGGGCTTCCGCGCGCTGGCCGCCCATCGCGGCCTTCGCCTGGTGC
CGGTCGCCATGGATGCGGACGGGCTGCTGCCCGACGCCTTCGAGGCCGCCTGCCGCGCGCACCGGCCGAAGCTGCTCTAC
TGCACGCCGACCCTGCACAACCCCACGACCGCCACGATGCCCCCGGACCGCCGCGCCGCGATCGCCGCCATCGCGACGGC
GCAGGGCATCGCGATCGTCGAGGACGACGCCTATGGCATGCTGCCGCGCAGCGCGCCGCCGCCGCTCGCCACCTTCGCGC
CCTCCATTTCCTATTACATCGCGGGGGTGGCGAAATCGCTGTCCCCGGCGCTGCGCCTCGCCTATGTCGTCCCGCCCGAC
GCCGCGGCCGCGCACCGGCTTGCCGCCGCGATCCGGGCGACCACGTCGATGGCCTCGCCGCTGACGGCGGCGATCGCGAC
GCGCTGGATCGGGGACGGCACGGCGGAGGCGGTGCGCGAGGCGATTCGCCGGGAAACCGCTTCGCGCCGGCAGATCCTGC
GCGCGCTGTTGCCGGAGGCGGGCCTGCGCACCGCCGAGGACGCGTTTCACGCCTGGCTGCCCCTCGACCCGCCCTGGACC
CGCAGCGCCTTCATCGACCGTCTGCGCTCGGCCGGGATCGGCGCCGTCGGCAGCGACGCCTTCGCCGCCGGCACCGCGCC
GGAGGCGGTGCGCCTCGGCCTCGGCGCGCCGGCCACGCGCGAGGCGCTGCGCACCAGCCTGGAGGCCGTCGCCGCGGCAC
TCGCCGCGCCGCCGCCGCTGGCCGACATCATCGTCTGA

Upstream 100 bases:

>100_bases
CAGCGCGGCATGGCAGAAGATGCGGGACGCCGCGATTGCCTCAGGCCACGGGCGGGGGTAAGGAAGCGGGGATACATATA
TATGGAACGAGAGCCGGACC

Downstream 100 bases:

>100_bases
TCGGCGCGGCGGATCAGCCCCGCCCGTCCGCCGCGATCCCGTCCCGCAGATGGTCGATCAGCGCGCGCGCCGCGGCGCGG
GTGTTCCGGCCCATCGGGAA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MTDRDMPPAWLPDIRKPDGPIYLAIAAALEADIRSGALRPGDRLPTQRRLAAAIGIDFTTVTRAYAEAARRGLIEGRVGL
GTYVRIIPPPRAAATAGGLIDMSMNLPPCFDDPALAARLWRDVTALGAEAGLDLLLRYQDIGGAMADRAAGAHWLRDRMG
PLPPERVLLCPGAQGALLAIAGLLAAPGDAVCVEDLTYPGFRALAAHRGLRLVPVAMDADGLLPDAFEAACRAHRPKLLY
CTPTLHNPTTATMPPDRRAAIAAIATAQGIAIVEDDAYGMLPRSAPPPLATFAPSISYYIAGVAKSLSPALRLAYVVPPD
AAAAHRLAAAIRATTSMASPLTAAIATRWIGDGTAEAVREAIRRETASRRQILRALLPEAGLRTAEDAFHAWLPLDPPWT
RSAFIDRLRSAGIGAVGSDAFAAGTAPEAVRLGLGAPATREALRTSLEAVAAALAAPPPLADIIV

Sequences:

>Translated_465_residues
MTDRDMPPAWLPDIRKPDGPIYLAIAAALEADIRSGALRPGDRLPTQRRLAAAIGIDFTTVTRAYAEAARRGLIEGRVGL
GTYVRIIPPPRAAATAGGLIDMSMNLPPCFDDPALAARLWRDVTALGAEAGLDLLLRYQDIGGAMADRAAGAHWLRDRMG
PLPPERVLLCPGAQGALLAIAGLLAAPGDAVCVEDLTYPGFRALAAHRGLRLVPVAMDADGLLPDAFEAACRAHRPKLLY
CTPTLHNPTTATMPPDRRAAIAAIATAQGIAIVEDDAYGMLPRSAPPPLATFAPSISYYIAGVAKSLSPALRLAYVVPPD
AAAAHRLAAAIRATTSMASPLTAAIATRWIGDGTAEAVREAIRRETASRRQILRALLPEAGLRTAEDAFHAWLPLDPPWT
RSAFIDRLRSAGIGAVGSDAFAAGTAPEAVRLGLGAPATREALRTSLEAVAAALAAPPPLADIIV
>Mature_464_residues
TDRDMPPAWLPDIRKPDGPIYLAIAAALEADIRSGALRPGDRLPTQRRLAAAIGIDFTTVTRAYAEAARRGLIEGRVGLG
TYVRIIPPPRAAATAGGLIDMSMNLPPCFDDPALAARLWRDVTALGAEAGLDLLLRYQDIGGAMADRAAGAHWLRDRMGP
LPPERVLLCPGAQGALLAIAGLLAAPGDAVCVEDLTYPGFRALAAHRGLRLVPVAMDADGLLPDAFEAACRAHRPKLLYC
TPTLHNPTTATMPPDRRAAIAAIATAQGIAIVEDDAYGMLPRSAPPPLATFAPSISYYIAGVAKSLSPALRLAYVVPPDA
AAAHRLAAAIRATTSMASPLTAAIATRWIGDGTAEAVREAIRRETASRRQILRALLPEAGLRTAEDAFHAWLPLDPPWTR
SAFIDRLRSAGIGAVGSDAFAAGTAPEAVRLGLGAPATREALRTSLEAVAAALAAPPPLADIIV

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790797, Length=470, Percent_Identity=24.2553191489362, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787710, Length=415, Percent_Identity=26.2650602409639, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 48673; Mature: 48542

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRDMPPAWLPDIRKPDGPIYLAIAAALEADIRSGALRPGDRLPTQRRLAAAIGIDFTT
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH
VTRAYAEAARRGLIEGRVGLGTYVRIIPPPRAAATAGGLIDMSMNLPPCFDDPALAARLW
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHH
RDVTALGAEAGLDLLLRYQDIGGAMADRAAGAHWLRDRMGPLPPERVLLCPGAQGALLAI
HHHHHHHHHHCHHHEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
AGLLAAPGDAVCVEDLTYPGFRALAAHRGLRLVPVAMDADGLLPDAFEAACRAHRPKLLY
HHHHHCCCCCEEHHCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEE
CTPTLHNPTTATMPPDRRAAIAAIATAQGIAIVEDDAYGMLPRSAPPPLATFAPSISYYI
EECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHH
AGVAKSLSPALRLAYVVPPDAAAAHRLAAAIRATTSMASPLTAAIATRWIGDGTAEAVRE
HHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AIRRETASRRQILRALLPEAGLRTAEDAFHAWLPLDPPWTRSAFIDRLRSAGIGAVGSDA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
FAAGTAPEAVRLGLGAPATREALRTSLEAVAAALAAPPPLADIIV
CCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
TDRDMPPAWLPDIRKPDGPIYLAIAAALEADIRSGALRPGDRLPTQRRLAAAIGIDFTT
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHH
VTRAYAEAARRGLIEGRVGLGTYVRIIPPPRAAATAGGLIDMSMNLPPCFDDPALAARLW
HHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHCCCEEEEECCCCCCCCCHHHHHHHH
RDVTALGAEAGLDLLLRYQDIGGAMADRAAGAHWLRDRMGPLPPERVLLCPGAQGALLAI
HHHHHHHHHHCHHHEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
AGLLAAPGDAVCVEDLTYPGFRALAAHRGLRLVPVAMDADGLLPDAFEAACRAHRPKLLY
HHHHHCCCCCEEHHCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEE
CTPTLHNPTTATMPPDRRAAIAAIATAQGIAIVEDDAYGMLPRSAPPPLATFAPSISYYI
EECCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCHHHHHH
AGVAKSLSPALRLAYVVPPDAAAAHRLAAAIRATTSMASPLTAAIATRWIGDGTAEAVRE
HHHHHHHCCHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AIRRETASRRQILRALLPEAGLRTAEDAFHAWLPLDPPWTRSAFIDRLRSAGIGAVGSDA
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
FAAGTAPEAVRLGLGAPATREALRTSLEAVAAALAAPPPLADIIV
CCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1400197 [H]