Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148259630

Identifier: 148259630

GI number: 148259630

Start: 693352

End: 694995

Strand: Reverse

Name: 148259630

Synonym: Acry_0616

Alternate gene names: NA

Gene position: 694995-693352 (Counterclockwise)

Preceding gene: 148259632

Following gene: 148259629

Centisome position: 20.51

GC content: 77.25

Gene sequence:

>1644_bases
GTGGACAAACAGGCCGTGACCAGCGCCGACATCGCCGCCGCCGAGCGCGTTCTCGGCATCGCCCAGACCAGGCCGGAACG
CGACCTGCTCGCCGGCGCCCTCGCGGCGCAGATCGACCTGGCCCGCGCCCGCCGCGCCGTCCCGCTCGACGAGCAGCTGG
CCCCCGCCTGCGTGTTCGACCCGCGCCTCCCCGGCTTCGCGCCGCCGCCGGCGGCACCGCTGCGCCTGCCCGCCGCCGAC
GCCCCGTTTCCCGGCGACGACGATGCGGCGATCGCCTTCGCCCCCGCCCGCCTTCAGGCGGCGTGGGTCCGCGCCGGGCA
CCTCACCGCGACCCGCCTGGCCGCGATCTGCCTCGACCGCATCGCCCGGCTCGATCCCGCGATCGGCGCCTTCGCCCGCC
TCAACCCCGCCGCGCTGGACGAGGCCGCCGAACTCGACGCCCGCGCCGCCCGCGGCGACTGGGCCGGCCCGCTGCACGGC
GTGCCCTGGGGCTGCAAGGACCTGATCGACACCGCCGGCCTCGTCACCGATCGCGGCGCCGAACCCTTTCTCGGCCGCCT
GCCGGAACAGGATGCCGTCGCGGTCCGCCGCCTGCGCGCCGCCGGCGCCGTGCTGCTCGGCAAGACCACCGTCGGCGCGC
TCGGCTACGGCGATGTCTGGCATGGCGGGCGCACCCGCAACCCGTGGAACACGGACGAGGGCGCCTCCGGCTCCTCCGCC
GGTTCCGCCGCCGCCGCCGCCGCCGGGCTTTGCGGTTTCGCCCTCGGCACCGAAACCCTCGGCTCGATCGTCGCCCCCGC
CGCGCGCTGCGGCGCCGTCGGCCTGCGCCCGAGCTTCGGCCGCATCGCCCGCACCGGCACGATGCCGCTCTGCCCGAGCC
TCGACCGTCTCGGCCCGCTCTGCCGCGATGCCGGCGACGCCGCGCTGATCCTCGCCATCCTCAACGGCGCCGACCCCGAC
GATCCCTCCAGCCTCGACATCCCCTTCGGCGGCGATGCCGGGCGCGACCCCGAAGGCCTGCGGCTCGGCATCCTGGCGGC
GGATTTCGCCGACCCCTCGGCGGAAGCCGCCCGCGCCGCGATCGAGCATTGCCGCGCCCTCGGCGTCGTCCCGGTGCCGG
TCGAACTGCCCGCGCTGCCTTGGGAAAGCCTGGTCTCCCTGCTGATGGCCGAGGCGGCGGCGAGCTTCGAGCCGCTCACC
CTCTCCGGCGCCGACGACCTGCTCGCCCGCCAGGACGAATCCGCCTGGCCCAACCAGTTCCGCCTCGCCCGCTTCCTCTC
GGCGGTCGACCACATCCAGCTCGACCGGCTGCGCCGCCGCGGCATGATGGCGATGCGCGACCTCCTCGCCGGGGTCGATC
TCCTCGCCGCGCCCTTCGGCGTCGGCGCGCTGCCGACGCTGGCCGCCTTCACCGGCCATCCCTGCCTCTGCCTGCCGGTC
GGCTTCACCCTCTCGCCGCCGCGCCCCTCCGCCGGCATCGCCGCCGACGCCCCGGCCGACGCCCCGGCGCGCCGCGTCCC
CGCCGCGCTCTGCCTCTGGGGCAGGCTGTTCGACGAGGCGCCGATGCTCGCCCTCGGCCACGCCCTCGCCCGGCGCTGCG
CGCTCGACCTCCGCCCGCCGCACGGCCTGACCGGCGCCACATAA

Upstream 100 bases:

>100_bases
CGGGTGGGAATCGGTTCGGCATCCATGCCCCGCAAATGGCGCCTCGGCCGCTCTTGGCAATGCCCGCCGGATCGGCCAAA
CAGACTGACAGGAGGTTTGG

Downstream 100 bases:

>100_bases
GGACAAACGCGCCGCATGACCCGGACCCATCCCCCCGCCGAAGACCCCGACCTCGCCGGCGACATCGCCGCGATCCGCCC
GAGCGGCCTGTTCGATCCCG

Product: amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD
APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG
VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA
GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD
DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT
LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV
GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT

Sequences:

>Translated_547_residues
MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD
APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG
VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA
GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD
DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT
LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV
GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT
>Mature_547_residues
MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD
APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG
VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA
GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD
DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT
LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV
GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT

Specific function: Unknown

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amidase family [H]

Homologues:

Organism=Homo sapiens, GI222831590, Length=257, Percent_Identity=33.852140077821, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI195972892, Length=237, Percent_Identity=27.4261603375527, Blast_Score=76, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17543272, Length=216, Percent_Identity=31.4814814814815, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17537465, Length=329, Percent_Identity=26.7477203647416, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17556264, Length=207, Percent_Identity=29.951690821256, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17538252, Length=302, Percent_Identity=27.8145695364238, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6319685, Length=168, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323950, Length=278, Percent_Identity=28.0575539568345, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24648113, Length=234, Percent_Identity=35.042735042735, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356731, Length=198, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24652985, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI19922090, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24652981, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24652983, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24644968, Length=262, Percent_Identity=25.5725190839695, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161078093, Length=300, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24648435, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24648437, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550774, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000120
- InterPro:   IPR020556 [H]

Pfam domain/function: PF01425 Amidase [H]

EC number: =3.5.1.4 [H]

Molecular weight: Translated: 56415; Mature: 56415

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFD
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEC
PRLPGFAPPPAAPLRLPAADAPFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDR
CCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHH
IARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHGVPWGCKDLIDTAGLVTDRGA
HHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
EPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA
CCHHHCCCCHHHHHHHHHHHHCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
CRDAGDAALILAILNGADPDDPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAA
HHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
IEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLTLSGADDLLARQDESAWPNQF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHH
RLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC
GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
HGLTGAT
CCCCCCC
>Mature Secondary Structure
MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFD
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEC
PRLPGFAPPPAAPLRLPAADAPFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDR
CCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHH
IARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHGVPWGCKDLIDTAGLVTDRGA
HHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
EPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA
CCHHHCCCCHHHHHHHHHHHHCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
CRDAGDAALILAILNGADPDDPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAA
HHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
IEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLTLSGADDLLARQDESAWPNQF
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHH
RLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC
GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPP
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
HGLTGAT
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9809753 [H]