| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259630
Identifier: 148259630
GI number: 148259630
Start: 693352
End: 694995
Strand: Reverse
Name: 148259630
Synonym: Acry_0616
Alternate gene names: NA
Gene position: 694995-693352 (Counterclockwise)
Preceding gene: 148259632
Following gene: 148259629
Centisome position: 20.51
GC content: 77.25
Gene sequence:
>1644_bases GTGGACAAACAGGCCGTGACCAGCGCCGACATCGCCGCCGCCGAGCGCGTTCTCGGCATCGCCCAGACCAGGCCGGAACG CGACCTGCTCGCCGGCGCCCTCGCGGCGCAGATCGACCTGGCCCGCGCCCGCCGCGCCGTCCCGCTCGACGAGCAGCTGG CCCCCGCCTGCGTGTTCGACCCGCGCCTCCCCGGCTTCGCGCCGCCGCCGGCGGCACCGCTGCGCCTGCCCGCCGCCGAC GCCCCGTTTCCCGGCGACGACGATGCGGCGATCGCCTTCGCCCCCGCCCGCCTTCAGGCGGCGTGGGTCCGCGCCGGGCA CCTCACCGCGACCCGCCTGGCCGCGATCTGCCTCGACCGCATCGCCCGGCTCGATCCCGCGATCGGCGCCTTCGCCCGCC TCAACCCCGCCGCGCTGGACGAGGCCGCCGAACTCGACGCCCGCGCCGCCCGCGGCGACTGGGCCGGCCCGCTGCACGGC GTGCCCTGGGGCTGCAAGGACCTGATCGACACCGCCGGCCTCGTCACCGATCGCGGCGCCGAACCCTTTCTCGGCCGCCT GCCGGAACAGGATGCCGTCGCGGTCCGCCGCCTGCGCGCCGCCGGCGCCGTGCTGCTCGGCAAGACCACCGTCGGCGCGC TCGGCTACGGCGATGTCTGGCATGGCGGGCGCACCCGCAACCCGTGGAACACGGACGAGGGCGCCTCCGGCTCCTCCGCC GGTTCCGCCGCCGCCGCCGCCGCCGGGCTTTGCGGTTTCGCCCTCGGCACCGAAACCCTCGGCTCGATCGTCGCCCCCGC CGCGCGCTGCGGCGCCGTCGGCCTGCGCCCGAGCTTCGGCCGCATCGCCCGCACCGGCACGATGCCGCTCTGCCCGAGCC TCGACCGTCTCGGCCCGCTCTGCCGCGATGCCGGCGACGCCGCGCTGATCCTCGCCATCCTCAACGGCGCCGACCCCGAC GATCCCTCCAGCCTCGACATCCCCTTCGGCGGCGATGCCGGGCGCGACCCCGAAGGCCTGCGGCTCGGCATCCTGGCGGC GGATTTCGCCGACCCCTCGGCGGAAGCCGCCCGCGCCGCGATCGAGCATTGCCGCGCCCTCGGCGTCGTCCCGGTGCCGG TCGAACTGCCCGCGCTGCCTTGGGAAAGCCTGGTCTCCCTGCTGATGGCCGAGGCGGCGGCGAGCTTCGAGCCGCTCACC CTCTCCGGCGCCGACGACCTGCTCGCCCGCCAGGACGAATCCGCCTGGCCCAACCAGTTCCGCCTCGCCCGCTTCCTCTC GGCGGTCGACCACATCCAGCTCGACCGGCTGCGCCGCCGCGGCATGATGGCGATGCGCGACCTCCTCGCCGGGGTCGATC TCCTCGCCGCGCCCTTCGGCGTCGGCGCGCTGCCGACGCTGGCCGCCTTCACCGGCCATCCCTGCCTCTGCCTGCCGGTC GGCTTCACCCTCTCGCCGCCGCGCCCCTCCGCCGGCATCGCCGCCGACGCCCCGGCCGACGCCCCGGCGCGCCGCGTCCC CGCCGCGCTCTGCCTCTGGGGCAGGCTGTTCGACGAGGCGCCGATGCTCGCCCTCGGCCACGCCCTCGCCCGGCGCTGCG CGCTCGACCTCCGCCCGCCGCACGGCCTGACCGGCGCCACATAA
Upstream 100 bases:
>100_bases CGGGTGGGAATCGGTTCGGCATCCATGCCCCGCAAATGGCGCCTCGGCCGCTCTTGGCAATGCCCGCCGGATCGGCCAAA CAGACTGACAGGAGGTTTGG
Downstream 100 bases:
>100_bases GGACAAACGCGCCGCATGACCCGGACCCATCCCCCCGCCGAAGACCCCGACCTCGCCGGCGACATCGCCGCGATCCGCCC GAGCGGCCTGTTCGATCCCG
Product: amidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT
Sequences:
>Translated_547_residues MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT >Mature_547_residues MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFDPRLPGFAPPPAAPLRLPAAD APFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDRIARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHG VPWGCKDLIDTAGLVTDRGAEPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPLCRDAGDAALILAILNGADPD DPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAAIEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLT LSGADDLLARQDESAWPNQFRLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPPHGLTGAT
Specific function: Unknown
COG id: COG0154
COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amidase family [H]
Homologues:
Organism=Homo sapiens, GI222831590, Length=257, Percent_Identity=33.852140077821, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI195972892, Length=237, Percent_Identity=27.4261603375527, Blast_Score=76, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17543272, Length=216, Percent_Identity=31.4814814814815, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17537465, Length=329, Percent_Identity=26.7477203647416, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17556264, Length=207, Percent_Identity=29.951690821256, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538252, Length=302, Percent_Identity=27.8145695364238, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319685, Length=168, Percent_Identity=38.0952380952381, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323950, Length=278, Percent_Identity=28.0575539568345, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24648113, Length=234, Percent_Identity=35.042735042735, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI21356731, Length=198, Percent_Identity=31.8181818181818, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI24652985, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI19922090, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24652981, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24652983, Length=244, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24644968, Length=262, Percent_Identity=25.5725190839695, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161078093, Length=300, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI24648435, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24648437, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550774, Length=260, Percent_Identity=26.5384615384615, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000120 - InterPro: IPR020556 [H]
Pfam domain/function: PF01425 Amidase [H]
EC number: =3.5.1.4 [H]
Molecular weight: Translated: 56415; Mature: 56415
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFD CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEC PRLPGFAPPPAAPLRLPAADAPFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDR CCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHH IARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHGVPWGCKDLIDTAGLVTDRGA HHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC EPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA CCHHHCCCCHHHHHHHHHHHHCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH CRDAGDAALILAILNGADPDDPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAA HHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH IEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLTLSGADDLLARQDESAWPNQF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHH RLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC HGLTGAT CCCCCCC >Mature Secondary Structure MDKQAVTSADIAAAERVLGIAQTRPERDLLAGALAAQIDLARARRAVPLDEQLAPACVFD CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCEEEC PRLPGFAPPPAAPLRLPAADAPFPGDDDAAIAFAPARLQAAWVRAGHLTATRLAAICLDR CCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHH IARLDPAIGAFARLNPAALDEAAELDARAARGDWAGPLHGVPWGCKDLIDTAGLVTDRGA HHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC EPFLGRLPEQDAVAVRRLRAAGAVLLGKTTVGALGYGDVWHGGRTRNPWNTDEGASGSSA CCHHHCCCCHHHHHHHHHHHHCEEEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSAAAAAAGLCGFALGTETLGSIVAPAARCGAVGLRPSFGRIARTGTMPLCPSLDRLGPL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH CRDAGDAALILAILNGADPDDPSSLDIPFGGDAGRDPEGLRLGILAADFADPSAEAARAA HHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH IEHCRALGVVPVPVELPALPWESLVSLLMAEAAASFEPLTLSGADDLLARQDESAWPNQF HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHCCCCCCCCHHH RLARFLSAVDHIQLDRLRRRGMMAMRDLLAGVDLLAAPFGVGALPTLAAFTGHPCLCLPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEC GFTLSPPRPSAGIAADAPADAPARRVPAALCLWGRLFDEAPMLALGHALARRCALDLRPP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC HGLTGAT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9809753 [H]