| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is cbg-1 [H]
Identifier: 148259584
GI number: 148259584
Start: 636115
End: 638898
Strand: Reverse
Name: cbg-1 [H]
Synonym: Acry_0568
Alternate gene names: 148259584
Gene position: 638898-636115 (Counterclockwise)
Preceding gene: 148259585
Following gene: 148259581
Centisome position: 18.85
GC content: 70.37
Gene sequence:
>2784_bases ATGCGCCGGATGCCCCTTGCCGCTCTGCTGTCCCTCTCGGCGATCCTGGCGGTCCGCGCCGCCCATGCCGCCCCGCAAGC GGCGGGATGCGCCTGGCGCAACGACCATCTTTCGACGGCACGCCGCACGGCGCTGCTGCTCCATGCCCTGACGCCCGGCG ACGAGACGGATCTGATTGCCGGAGCGGGAACGCATGAACCCTACGTGTTCTACACCAGGGGACTCAAGCGGTTCTGCATT CCGCCCATGGGTCTCGAGGATGGGCCAGCCGGTGTCGGCGACAAGCTCGGCGGCGTCACGGCCCTGCCCGCCGGCGTGGC GCTCGCCGCGACCTGGGATCCGTCGCTCGCGCGGCGCTACGGGGCGGTGATCGGCGCCGAGCAGAAGGCGAAGGGAACCG CCGTCGATCTCGGGCCGACCGTGAACATCGATCGCGATCCGCGCTGGGGGCGGTCTTTCGAATCCCTCTCGGAAGACCCT TATCTGGCCGCCCGGATCGGCGTTGCCGAGATCCGGGGCATCCAGTCCACCGGCGTCATGGCGCAAGTGAAGCACTTCGC CGTCTACAACCAGGAGACCTATCGCAACACCCCGGAGGACGACGTCATCGTCTCGCCCCGCGCGCTGCATGAAATCTACC TCCCCGCCTTTCGCGCCGCCGTGCGGCGCGCCCATGTGGCCTCGATCATGTGCGGCTATGCGACGATCGGGGGGCATGAG AGTTGCGGCGACAAGGCGTTGCTGACCGGCGTGCTGCGCGCGGACTGGGGATTCCGCGGCTTCGTCACCTCCGACTATCA GGCCATTCACGCAACGGCCGACGCGGCCGCCGGCGCCGATATGGAGCAGCCCTTCGCGACCTATTTCGGCGCGCGGCTGA CGCAGGCGGTCGCGGCCGGAAAGCTCGCCCGCAGCGTGCCGGAGACGATGACGCGGCATATCCTCGCCGAAATGTTCCGC TTCAGGCTGTTCGATCATCCGCCCCAGGGCAGCACCACGGCCATCGTCGCGACCCGGGCGGATCGCCTGGCGGCGACCCG GATCGCCGAAGCCGGGACGGTGCTGCTCAAGAATGATGGAAACGTCCTGCCGCTCGATCCGGGCCATGGCGGGACGATCG CGGTCATCGGGCCCGCCGCATCGATCCAGCCTGTCTACGCCGGCGGCGGCAGCGCCAACGTGGTGCCCATGCAGCCGGTC CCGCCGCTCGCCGGCATCGATCACGCGCCGGGGATGACGCGCCACGTCGACTACGTGGCGGGATTGCCCGCCGACAAGGC GCTGACGCCGATCCCGCCCTCGGCGCTTTCGGGTCCGTTCCGGCCCACGCCCCTGCACGGTTCGTTCCAGGCCGTGCTCA CCGCGCCGGAGACCGGCACCTACGTGCTCGGCATCACCAACCCGTGCCATTGCTATGCGCCCACCGATCTCTCGCTCGAT GGCAGGGAATTGCTGAGCGATCCCGGCACGCCGCCGGTTTCCACCTATTCCGCCGCGGTGCAACTGCGGAAGGGCGAGCG GTACAGGCTCGGCGTCACCGGCGCCGCGTCGCGCCTGACCTGGGCCACGCCATCGACCCTGCGGCCCGATATCGCGCGCG CGGTCGCGGCGGCGCGACGGGCCGCCGTCGCCATCGTGGTGGTGGCGGACGACACCGAGTCGGAAGCGGCGGACAGGCCC GATCTCGACCTGCCGTCCGCCCAGAACCGACTGATCGAGGCGGTGTCATCGGCAAATCCGCACACGGTCGTGGTCATCGA TGCCGGAGCGCCGGTCGCCATGCCCTGGCTCGGCAAGGTCGCCGCGGTCGTTGATGCGTGGTATCCGGGCGAGACCAACG GAACGGCCCTGGCCGCGATCCTGTTCGGCAAGGCCGATCCCGGCGGGCACCTGCCGGTCACGTTCCCCGCACACCTCGCC GACATGCCGACCGCGCCGGTGGCGCGCTTTCCCGGCACGGGCGGCAGGGTCGACTATTCCGAGGGAATCGACGTCGGCTA TCGCTGGTATTCGGCGCATCATGTCAGGCCGCTGTTCCCGTTCGGGTTTGGCCTCTCCTACACGCATTTCGCGTTCAGCG ACCTGAAGGTCGTCTCCGGCCCCGGCGACGGGACACGCCCGGTCGTCGTATCCGCCCTCGTCACGAATGCCGGCAAGGTT GCCGGCAGCGACGTCGCCCAGCTCTATCTCCGTTTCCCGCGCAGCGCGGGCGAGGCGCCCCTCAAGCTCGTCGGCTTCCG CCGCGTCCGGCTTGCTCCGGGGCAGTCGAAGCGTCTCCGCTTCACGGTGACGCCGCGGCAGACCTGGTGGTGGCACGGTT CGGGCTGGACGGCCTCGCCCGGCACCTATCGGCTGTATCTCGGCGATGCCGCCGACGATGCCCATCTCGCGCAACGCGTT TCGTTCCCGATGCCGCAGACGGTCGGCGCCCGGAATGTGCTGGTCGAGGCGCCGGAACAGGCCATCCCCGGCCAGCCCGT CAAGGTGAAGGTGTCGCTCTCGGCCGGCGGCGAGGCGACGCTCCGGCACGTGCGGCTGAGGCTCGACGCGCCGGCGGGAT GGCGGGTTTCCGCCATCGGTTCCGCGGCAGGGGAAGGCATCCAGCCTGGAGAGGCGGTTCGCGCGACCTTCACGGTCACG CCCCCCGGCTGGGCGGCGGCGGGGACCTATGCGCTGCGGGCGGTTGCGCAACTCGGCGCGAGACATTGCACCAGGGGGGC CGACGCAGGATGTGTCACGGCGACGCGGGACAGCGGCGCGATGATCACGCTCGCGGCCCGATGA
Upstream 100 bases:
>100_bases GGTGTCGCGCCAGCGCCGGGCCCTGCTTGCCAGCAGCCGGCAGGCCGAGGAGAACGGCGGCCAGAAGGCTCGCCTCGCCC CCTTGTCATAGGATGAACCG
Downstream 100 bases:
>100_bases AGGGATGCCGGCGCGGCCGGTTCAGGGGCGGGGCCGCCAGGCCCGGGGGCGTATCACGAAGAGCCTGGGGACATCAGGCG GTCATCGTCAGGTCCCGGCC
Product: glycoside hydrolase family 3 protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 927; Mature: 927
Protein sequence:
>927_residues MRRMPLAALLSLSAILAVRAAHAAPQAAGCAWRNDHLSTARRTALLLHALTPGDETDLIAGAGTHEPYVFYTRGLKRFCI PPMGLEDGPAGVGDKLGGVTALPAGVALAATWDPSLARRYGAVIGAEQKAKGTAVDLGPTVNIDRDPRWGRSFESLSEDP YLAARIGVAEIRGIQSTGVMAQVKHFAVYNQETYRNTPEDDVIVSPRALHEIYLPAFRAAVRRAHVASIMCGYATIGGHE SCGDKALLTGVLRADWGFRGFVTSDYQAIHATADAAAGADMEQPFATYFGARLTQAVAAGKLARSVPETMTRHILAEMFR FRLFDHPPQGSTTAIVATRADRLAATRIAEAGTVLLKNDGNVLPLDPGHGGTIAVIGPAASIQPVYAGGGSANVVPMQPV PPLAGIDHAPGMTRHVDYVAGLPADKALTPIPPSALSGPFRPTPLHGSFQAVLTAPETGTYVLGITNPCHCYAPTDLSLD GRELLSDPGTPPVSTYSAAVQLRKGERYRLGVTGAASRLTWATPSTLRPDIARAVAAARRAAVAIVVVADDTESEAADRP DLDLPSAQNRLIEAVSSANPHTVVVIDAGAPVAMPWLGKVAAVVDAWYPGETNGTALAAILFGKADPGGHLPVTFPAHLA DMPTAPVARFPGTGGRVDYSEGIDVGYRWYSAHHVRPLFPFGFGLSYTHFAFSDLKVVSGPGDGTRPVVVSALVTNAGKV AGSDVAQLYLRFPRSAGEAPLKLVGFRRVRLAPGQSKRLRFTVTPRQTWWWHGSGWTASPGTYRLYLGDAADDAHLAQRV SFPMPQTVGARNVLVEAPEQAIPGQPVKVKVSLSAGGEATLRHVRLRLDAPAGWRVSAIGSAAGEGIQPGEAVRATFTVT PPGWAAAGTYALRAVAQLGARHCTRGADAGCVTATRDSGAMITLAAR
Sequences:
>Translated_927_residues MRRMPLAALLSLSAILAVRAAHAAPQAAGCAWRNDHLSTARRTALLLHALTPGDETDLIAGAGTHEPYVFYTRGLKRFCI PPMGLEDGPAGVGDKLGGVTALPAGVALAATWDPSLARRYGAVIGAEQKAKGTAVDLGPTVNIDRDPRWGRSFESLSEDP YLAARIGVAEIRGIQSTGVMAQVKHFAVYNQETYRNTPEDDVIVSPRALHEIYLPAFRAAVRRAHVASIMCGYATIGGHE SCGDKALLTGVLRADWGFRGFVTSDYQAIHATADAAAGADMEQPFATYFGARLTQAVAAGKLARSVPETMTRHILAEMFR FRLFDHPPQGSTTAIVATRADRLAATRIAEAGTVLLKNDGNVLPLDPGHGGTIAVIGPAASIQPVYAGGGSANVVPMQPV PPLAGIDHAPGMTRHVDYVAGLPADKALTPIPPSALSGPFRPTPLHGSFQAVLTAPETGTYVLGITNPCHCYAPTDLSLD GRELLSDPGTPPVSTYSAAVQLRKGERYRLGVTGAASRLTWATPSTLRPDIARAVAAARRAAVAIVVVADDTESEAADRP DLDLPSAQNRLIEAVSSANPHTVVVIDAGAPVAMPWLGKVAAVVDAWYPGETNGTALAAILFGKADPGGHLPVTFPAHLA DMPTAPVARFPGTGGRVDYSEGIDVGYRWYSAHHVRPLFPFGFGLSYTHFAFSDLKVVSGPGDGTRPVVVSALVTNAGKV AGSDVAQLYLRFPRSAGEAPLKLVGFRRVRLAPGQSKRLRFTVTPRQTWWWHGSGWTASPGTYRLYLGDAADDAHLAQRV SFPMPQTVGARNVLVEAPEQAIPGQPVKVKVSLSAGGEATLRHVRLRLDAPAGWRVSAIGSAAGEGIQPGEAVRATFTVT PPGWAAAGTYALRAVAQLGARHCTRGADAGCVTATRDSGAMITLAAR >Mature_927_residues MRRMPLAALLSLSAILAVRAAHAAPQAAGCAWRNDHLSTARRTALLLHALTPGDETDLIAGAGTHEPYVFYTRGLKRFCI PPMGLEDGPAGVGDKLGGVTALPAGVALAATWDPSLARRYGAVIGAEQKAKGTAVDLGPTVNIDRDPRWGRSFESLSEDP YLAARIGVAEIRGIQSTGVMAQVKHFAVYNQETYRNTPEDDVIVSPRALHEIYLPAFRAAVRRAHVASIMCGYATIGGHE SCGDKALLTGVLRADWGFRGFVTSDYQAIHATADAAAGADMEQPFATYFGARLTQAVAAGKLARSVPETMTRHILAEMFR FRLFDHPPQGSTTAIVATRADRLAATRIAEAGTVLLKNDGNVLPLDPGHGGTIAVIGPAASIQPVYAGGGSANVVPMQPV PPLAGIDHAPGMTRHVDYVAGLPADKALTPIPPSALSGPFRPTPLHGSFQAVLTAPETGTYVLGITNPCHCYAPTDLSLD GRELLSDPGTPPVSTYSAAVQLRKGERYRLGVTGAASRLTWATPSTLRPDIARAVAAARRAAVAIVVVADDTESEAADRP DLDLPSAQNRLIEAVSSANPHTVVVIDAGAPVAMPWLGKVAAVVDAWYPGETNGTALAAILFGKADPGGHLPVTFPAHLA DMPTAPVARFPGTGGRVDYSEGIDVGYRWYSAHHVRPLFPFGFGLSYTHFAFSDLKVVSGPGDGTRPVVVSALVTNAGKV AGSDVAQLYLRFPRSAGEAPLKLVGFRRVRLAPGQSKRLRFTVTPRQTWWWHGSGWTASPGTYRLYLGDAADDAHLAQRV SFPMPQTVGARNVLVEAPEQAIPGQPVKVKVSLSAGGEATLRHVRLRLDAPAGWRVSAIGSAAGEGIQPGEAVRATFTVT PPGWAAAGTYALRAVAQLGARHCTRGADAGCVTATRDSGAMITLAAR
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=360, Percent_Identity=29.7222222222222, Blast_Score=133, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 97364; Mature: 97364
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRMPLAALLSLSAILAVRAAHAAPQAAGCAWRNDHLSTARRTALLLHALTPGDETDLIA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCEEE GAGTHEPYVFYTRGLKRFCIPPMGLEDGPAGVGDKLGGVTALPAGVALAATWDPSLARRY CCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHH GAVIGAEQKAKGTAVDLGPTVNIDRDPRWGRSFESLSEDPYLAARIGVAEIRGIQSTGVM HHHHCCCCCCCCCEEECCCEECCCCCCCCCCCHHHCCCCCCEEEECCHHHHCCCCCCCHH AQVKHFAVYNQETYRNTPEDDVIVSPRALHEIYLPAFRAAVRRAHVASIMCGYATIGGHE HHHHHHHEECHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SCGDKALLTGVLRADWGFRGFVTSDYQAIHATADAAAGADMEQPFATYFGARLTQAVAAG CCCCHHHHHHHHHCCCCCCCEEECCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHH KLARSVPETMTRHILAEMFRFRLFDHPPQGSTTAIVATRADRLAATRIAEAGTVLLKNDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCC NVLPLDPGHGGTIAVIGPAASIQPVYAGGGSANVVPMQPVPPLAGIDHAPGMTRHVDYVA CEEECCCCCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHH GLPADKALTPIPPSALSGPFRPTPLHGSFQAVLTAPETGTYVLGITNPCHCYAPTDLSLD CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCC GRELLSDPGTPPVSTYSAAVQLRKGERYRLGVTGAASRLTWATPSTLRPDIARAVAAARR HHHHHCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCC AAVAIVVVADDTESEAADRPDLDLPSAQNRLIEAVSSANPHTVVVIDAGAPVAMPWLGKV CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH AAVVDAWYPGETNGTALAAILFGKADPGGHLPVTFPAHLADMPTAPVARFPGTGGRVDYS HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEECHHHHCCCCCCCHHCCCCCCCEEECC EGIDVGYRWYSAHHVRPLFPFGFGLSYTHFAFSDLKVVSGPGDGTRPVVVSALVTNAGKV CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCCCCEEEEEHHHCCCCC AGSDVAQLYLRFPRSAGEAPLKLVGFRRVRLAPGQSKRLRFTVTPRQTWWWHGSGWTASP CCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCC GTYRLYLGDAADDAHLAQRVSFPMPQTVGARNVLVEAPEQAIPGQPVKVKVSLSAGGEAT CEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEEECCCCCEE LRHVRLRLDAPAGWRVSAIGSAAGEGIQPGEAVRATFTVTPPGWAAAGTYALRAVAQLGA EEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH RHCTRGADAGCVTATRDSGAMITLAAR HHHCCCCCCCEEEEECCCCCEEEEEEC >Mature Secondary Structure MRRMPLAALLSLSAILAVRAAHAAPQAAGCAWRNDHLSTARRTALLLHALTPGDETDLIA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCEEE GAGTHEPYVFYTRGLKRFCIPPMGLEDGPAGVGDKLGGVTALPAGVALAATWDPSLARRY CCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECCHHHHHHH GAVIGAEQKAKGTAVDLGPTVNIDRDPRWGRSFESLSEDPYLAARIGVAEIRGIQSTGVM HHHHCCCCCCCCCEEECCCEECCCCCCCCCCCHHHCCCCCCEEEECCHHHHCCCCCCCHH AQVKHFAVYNQETYRNTPEDDVIVSPRALHEIYLPAFRAAVRRAHVASIMCGYATIGGHE HHHHHHHEECHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SCGDKALLTGVLRADWGFRGFVTSDYQAIHATADAAAGADMEQPFATYFGARLTQAVAAG CCCCHHHHHHHHHCCCCCCCEEECCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHH KLARSVPETMTRHILAEMFRFRLFDHPPQGSTTAIVATRADRLAATRIAEAGTVLLKNDG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCC NVLPLDPGHGGTIAVIGPAASIQPVYAGGGSANVVPMQPVPPLAGIDHAPGMTRHVDYVA CEEECCCCCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHH GLPADKALTPIPPSALSGPFRPTPLHGSFQAVLTAPETGTYVLGITNPCHCYAPTDLSLD CCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCC GRELLSDPGTPPVSTYSAAVQLRKGERYRLGVTGAASRLTWATPSTLRPDIARAVAAARR HHHHHCCCCCCCCCHHHHHEEEECCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHCC AAVAIVVVADDTESEAADRPDLDLPSAQNRLIEAVSSANPHTVVVIDAGAPVAMPWLGKV CEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH AAVVDAWYPGETNGTALAAILFGKADPGGHLPVTFPAHLADMPTAPVARFPGTGGRVDYS HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCEECHHHHCCCCCCCHHCCCCCCCEEECC EGIDVGYRWYSAHHVRPLFPFGFGLSYTHFAFSDLKVVSGPGDGTRPVVVSALVTNAGKV CCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEECCCCCCCCEEEEEHHHCCCCC AGSDVAQLYLRFPRSAGEAPLKLVGFRRVRLAPGQSKRLRFTVTPRQTWWWHGSGWTASP CCHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCC GTYRLYLGDAADDAHLAQRVSFPMPQTVGARNVLVEAPEQAIPGQPVKVKVSLSAGGEAT CEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEECCHHCCCCCCEEEEEEECCCCCEE LRHVRLRLDAPAGWRVSAIGSAAGEGIQPGEAVRATFTVTPPGWAAAGTYALRAVAQLGA EEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH RHCTRGADAGCVTATRDSGAMITLAAR HHHCCCCCCCEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]