| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is puuA [H]
Identifier: 148259554
GI number: 148259554
Start: 600275
End: 601615
Strand: Reverse
Name: puuA [H]
Synonym: Acry_0538
Alternate gene names: 148259554
Gene position: 601615-600275 (Counterclockwise)
Preceding gene: 148259555
Following gene: 148259553
Centisome position: 17.75
GC content: 62.42
Gene sequence:
>1341_bases ATGACCGACCTGGCCGAATGGTTCAACGAACACCGCATCACTGAAGTGGAGTGTCTGGTTCCCGATATTACCGGCATCCC GCGTGGCAAGATCATGCCCGCGCAGAAATTCCTTCGCGGCGGCGCACCTCGCCTGCCGGAGAGCATTTTCATCCAGTCCG TGACGGGAGAATATCCGGAAGACCCGGAAGACACGCTGACCGACCCTGCGATCATCGACATCAATCTGATCCCCGATCCC GCGACCGTCCGCCTCGTGCCCTGGGCGCATGAGCCGACAGCGCAGATCATCCACGACTGCCAGTATTCGAATGGCCGACC GGTGACGATCGCGCCACGGCAGGTACTGCGCCATGTGCTCGAACTCTACAAGGAGCGTGGCTGGCAACCCGTCCTCGCGC CGGAACTGGAGTTCTATCTGGTCGGGCGCAATACCGACCCTGACTACCCGTTAGTGCCGCCGGTCGGCCGCTCCGGGCGG CAGGAAACCGGGCGGCAATCCTACTCGATCGACGCGGTGAACGAATTCGATCCGCTGTTCGAGGAGATGTACGATTTCTG CGAAATGCAGGAACTTGATCTCGACACGCTCATCCATGAGGAAGGGGCGGCCCAGGTCGAGATCAACTTCCTGCACGGCG ATCCGCTGAACCGGGCCGATCAGGTGTTTCTCTTCAAGCGCACGGTTCGCGAGGTCGCGCTGCGCCACGACATGTATGCC ACCTTCATGGCCAAGCCGATGGGCCAGGAGCCGGGCAGCGCCATGCATGTGCACCAGAGCGTGGTCGACCTCGAAACCGG GCGAAACCTGTTCGCCGACCAGGACGGGCGGCCGAGCCAGCTTTTTCTTTCCTTCATTGCCGGATTGCAGAAATACATTC CGGCGATCATGCCGATCTTCGCGCCGAACGTGAATTCCTATCGCCGGCTCACGCGGTTTTCCAACGCGCCGATCAACCTG CAATGGGGGCATGATAACCGGACCTGCGGCCTGCGTGTGCCTTACGGCGAGGCCGGCGCGATGCGCGTCGAGAACCGCGT GCCGGGGGCGGACGCGAATCCCTATCTCGCCTTCGCCGCCTCGCTCGCCTGCGGTTATCTCGGCATGATGGAAGGGCTGA CGCCGACTCCGGCCTTCCGCGGCTCGGCCTATTCGCAACCCTATTCGCTGCCGCGCGAACTCTCGCACGCGCTCGAGATG ATGGAACAGGCGCGGCCGCTGATCGACATTCTCGGGCAGAAGCTCGTCGAGGTGTTCGTCGCGGTGAAGCGGCTCGAATA CGAGACCTATCTGCGGGTGATCAGCTCGTGGGAACGCGAACACCTGCTGCTGAACGTCTGA
Upstream 100 bases:
>100_bases CCGTGGCGGCGGGACCGCGGACCCCACGCCACACATCCGAAACCGGGCATCGTCGCCGGTGGAACATCATGTTCCCGCCG GGACTGCTCCTGAGGCACAC
Downstream 100 bases:
>100_bases ACCGCATGGCCCTGTCGAACTACTACGAGACCACGGCGCGGTATGACGCGACGACGGCGCCGCTCGAAGGCGACCTGCGC TGCGATGTCGCGATCATCGG
Product: glutamate--putrescine ligase
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTDLAEWFNEHRITEVECLVPDITGIPRGKIMPAQKFLRGGAPRLPESIFIQSVTGEYPEDPEDTLTDPAIIDINLIPDP ATVRLVPWAHEPTAQIIHDCQYSNGRPVTIAPRQVLRHVLELYKERGWQPVLAPELEFYLVGRNTDPDYPLVPPVGRSGR QETGRQSYSIDAVNEFDPLFEEMYDFCEMQELDLDTLIHEEGAAQVEINFLHGDPLNRADQVFLFKRTVREVALRHDMYA TFMAKPMGQEPGSAMHVHQSVVDLETGRNLFADQDGRPSQLFLSFIAGLQKYIPAIMPIFAPNVNSYRRLTRFSNAPINL QWGHDNRTCGLRVPYGEAGAMRVENRVPGADANPYLAFAASLACGYLGMMEGLTPTPAFRGSAYSQPYSLPRELSHALEM MEQARPLIDILGQKLVEVFVAVKRLEYETYLRVISSWEREHLLLNV
Sequences:
>Translated_446_residues MTDLAEWFNEHRITEVECLVPDITGIPRGKIMPAQKFLRGGAPRLPESIFIQSVTGEYPEDPEDTLTDPAIIDINLIPDP ATVRLVPWAHEPTAQIIHDCQYSNGRPVTIAPRQVLRHVLELYKERGWQPVLAPELEFYLVGRNTDPDYPLVPPVGRSGR QETGRQSYSIDAVNEFDPLFEEMYDFCEMQELDLDTLIHEEGAAQVEINFLHGDPLNRADQVFLFKRTVREVALRHDMYA TFMAKPMGQEPGSAMHVHQSVVDLETGRNLFADQDGRPSQLFLSFIAGLQKYIPAIMPIFAPNVNSYRRLTRFSNAPINL QWGHDNRTCGLRVPYGEAGAMRVENRVPGADANPYLAFAASLACGYLGMMEGLTPTPAFRGSAYSQPYSLPRELSHALEM MEQARPLIDILGQKLVEVFVAVKRLEYETYLRVISSWEREHLLLNV >Mature_445_residues TDLAEWFNEHRITEVECLVPDITGIPRGKIMPAQKFLRGGAPRLPESIFIQSVTGEYPEDPEDTLTDPAIIDINLIPDPA TVRLVPWAHEPTAQIIHDCQYSNGRPVTIAPRQVLRHVLELYKERGWQPVLAPELEFYLVGRNTDPDYPLVPPVGRSGRQ ETGRQSYSIDAVNEFDPLFEEMYDFCEMQELDLDTLIHEEGAAQVEINFLHGDPLNRADQVFLFKRTVREVALRHDMYAT FMAKPMGQEPGSAMHVHQSVVDLETGRNLFADQDGRPSQLFLSFIAGLQKYIPAIMPIFAPNVNSYRRLTRFSNAPINLQ WGHDNRTCGLRVPYGEAGAMRVENRVPGADANPYLAFAASLACGYLGMMEGLTPTPAFRGSAYSQPYSLPRELSHALEMM EQARPLIDILGQKLVEVFVAVKRLEYETYLRVISSWEREHLLLNV
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=447, Percent_Identity=25.2796420581655, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI87081870, Length=440, Percent_Identity=34.0909090909091, Blast_Score=218, Evalue=7e-58, Organism=Escherichia coli, GI1790301, Length=461, Percent_Identity=26.0303687635575, Blast_Score=115, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 50477; Mature: 50346
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLAEWFNEHRITEVECLVPDITGIPRGKIMPAQKFLRGGAPRLPESIFIQSVTGEYPE CCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCC DPEDTLTDPAIIDINLIPDPATVRLVPWAHEPTAQIIHDCQYSNGRPVTIAPRQVLRHVL CCHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHH ELYKERGWQPVLAPELEFYLVGRNTDPDYPLVPPVGRSGRQETGRQSYSIDAVNEFDPLF HHHHHCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHH EEMYDFCEMQELDLDTLIHEEGAAQVEINFLHGDPLNRADQVFLFKRTVREVALRHDMYA HHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH TFMAKPMGQEPGSAMHVHQSVVDLETGRNLFADQDGRPSQLFLSFIAGLQKYIPAIMPIF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH APNVNSYRRLTRFSNAPINLQWGHDNRTCGLRVPYGEAGAMRVENRVPGADANPYLAFAA CCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHH SLACGYLGMMEGLTPTPAFRGSAYSQPYSLPRELSHALEMMEQARPLIDILGQKLVEVFV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVKRLEYETYLRVISSWEREHLLLNV HHHHHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure TDLAEWFNEHRITEVECLVPDITGIPRGKIMPAQKFLRGGAPRLPESIFIQSVTGEYPE CCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCC DPEDTLTDPAIIDINLIPDPATVRLVPWAHEPTAQIIHDCQYSNGRPVTIAPRQVLRHVL CCHHHCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECHHHHHHHHH ELYKERGWQPVLAPELEFYLVGRNTDPDYPLVPPVGRSGRQETGRQSYSIDAVNEFDPLF HHHHHCCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCHHHHHHHH EEMYDFCEMQELDLDTLIHEEGAAQVEINFLHGDPLNRADQVFLFKRTVREVALRHDMYA HHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH TFMAKPMGQEPGSAMHVHQSVVDLETGRNLFADQDGRPSQLFLSFIAGLQKYIPAIMPIF HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH APNVNSYRRLTRFSNAPINLQWGHDNRTCGLRVPYGEAGAMRVENRVPGADANPYLAFAA CCCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHH SLACGYLGMMEGLTPTPAFRGSAYSQPYSLPRELSHALEMMEQARPLIDILGQKLVEVFV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH AVKRLEYETYLRVISSWEREHLLLNV HHHHHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]