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The map label for this gene is ycdJ [C]

Identifier: 148259551

GI number: 148259551

Start: 596575

End: 597471

Strand: Reverse

Name: ycdJ [C]

Synonym: Acry_0535

Alternate gene names: 148259551

Gene position: 597471-596575 (Counterclockwise)

Preceding gene: 148259553

Following gene: 148259544

Centisome position: 17.63

GC content: 68.67

Gene sequence:

>897_bases
ATGAGCGGGTTTTTCGAGGGGTTCAGCGAATCGACGGCCGATCTCGGCGACGGGCGGCACTTCCGGCTGCGCAGCGGCGG
CAGCGGGCCGCCGCTGGTGATGCTGCACGGCATGCCGCAGACCCATTGCATGTGGCACCGGATCGCCCCCGCGCTGGCGG
CGCGATTCACCGTGATCTGCCCGGACATCACCGGCTATGGAAACAGCTACAAGCCGGCGGCGAGTGCGGACCACGAAGCC
TATTCCAAGCGGCGCATGGCGCAAGACATCGTCGACCTCGCGGCACATCTCGGGATCGGCCGCTTCGCGCTGGTCGGCCA
CGATCGCGGGGCGCGGGTATCGCACCGGCTGGCGCTCGACCATCCCGACCGGATCTCGCGGCTCGCGCTGCTCGACATCA
TTCCCACGATCGAGCATTTCGAACGCACCGACATGCGCTTCGCCATGGGCTATTATCACTGGTTCTTCCTCGCCCAGCCG
GCACCGCTGCCGGAGGACCTGATCAACCGCGACGCCGGATACTGGCTGCTGTCGCAGACCGCCCGGCACAAGACGGCGCG
GGCGGTGTTCGACGAGGCGGCGATGGCGGATTACCGGCGGGCGATGGCCGACCCGGCGACGGTAACGGCGATCTGCGAGG
ATTATCGCGCGGCGGCGACGATCGACCTCGAACACGACCGCGAAAGCCGGGCGCGGCGGGAGAGGATCGCCGCGCCGTTG
AAGGTGCTGTGGGGGTCGCGCGGGCTGGTCGGCGCGCTCTACGATCCGCTGGAGATCTGGCGCGGATATGCGTCAGGCCC
GGTGGAGGGGCAGGCCATCGAGTCGGGTCATTTTCTCGCCGAGGAAGCCCCGGAGGCGACGCTGGCCGCGCTCCAGGAAT
TTCTGGCGGACGGGTAG

Upstream 100 bases:

>100_bases
TGCCGCGTCTCGCCGCCCTGTTCAAGGCCGCACCCTGCTGGCACTCTGCGCCGGCGGGACCGCTGCTTGCGGTGTTCGCC
AACACATGCCGGGAGCGGAG

Downstream 100 bases:

>100_bases
AGCATCATCCGATCAGATAAAGATGCTCTGTTTATCAATATGATAGAGCATCATCCGATCGATTAGGATCGGAAAATGCT
CTATCGCGCCGCCCGCCAGA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSGFFEGFSESTADLGDGRHFRLRSGGSGPPLVMLHGMPQTHCMWHRIAPALAARFTVICPDITGYGNSYKPAASADHEA
YSKRRMAQDIVDLAAHLGIGRFALVGHDRGARVSHRLALDHPDRISRLALLDIIPTIEHFERTDMRFAMGYYHWFFLAQP
APLPEDLINRDAGYWLLSQTARHKTARAVFDEAAMADYRRAMADPATVTAICEDYRAAATIDLEHDRESRARRERIAAPL
KVLWGSRGLVGALYDPLEIWRGYASGPVEGQAIESGHFLAEEAPEATLAALQEFLADG

Sequences:

>Translated_298_residues
MSGFFEGFSESTADLGDGRHFRLRSGGSGPPLVMLHGMPQTHCMWHRIAPALAARFTVICPDITGYGNSYKPAASADHEA
YSKRRMAQDIVDLAAHLGIGRFALVGHDRGARVSHRLALDHPDRISRLALLDIIPTIEHFERTDMRFAMGYYHWFFLAQP
APLPEDLINRDAGYWLLSQTARHKTARAVFDEAAMADYRRAMADPATVTAICEDYRAAATIDLEHDRESRARRERIAAPL
KVLWGSRGLVGALYDPLEIWRGYASGPVEGQAIESGHFLAEEAPEATLAALQEFLADG
>Mature_297_residues
SGFFEGFSESTADLGDGRHFRLRSGGSGPPLVMLHGMPQTHCMWHRIAPALAARFTVICPDITGYGNSYKPAASADHEAY
SKRRMAQDIVDLAAHLGIGRFALVGHDRGARVSHRLALDHPDRISRLALLDIIPTIEHFERTDMRFAMGYYHWFFLAQPA
PLPEDLINRDAGYWLLSQTARHKTARAVFDEAAMADYRRAMADPATVTAICEDYRAAATIDLEHDRESRARRERIAAPLK
VLWGSRGLVGALYDPLEIWRGYASGPVEGQAIESGHFLAEEAPEATLAALQEFLADG

Specific function: Catalyzes the hydrolytic defluorination of fluoroacetate to produce glycolate. Has low activity towards chloroacetate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI218777840, Length=281, Percent_Identity=24.1992882562278, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI13376164, Length=281, Percent_Identity=24.1992882562278, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.8.1.3 [H]

Molecular weight: Translated: 33027; Mature: 32896

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFFEGFSESTADLGDGRHFRLRSGGSGPPLVMLHGMPQTHCMWHRIAPALAARFTVIC
CCCHHCCCCCCHHHCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEEC
PDITGYGNSYKPAASADHEAYSKRRMAQDIVDLAAHLGIGRFALVGHDRGARVSHRLALD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEECC
HPDRISRLALLDIIPTIEHFERTDMRFAMGYYHWFFLAQPAPLPEDLINRDAGYWLLSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEHHHHH
ARHKTARAVFDEAAMADYRRAMADPATVTAICEDYRAAATIDLEHDRESRARRERIAAPL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
KVLWGSRGLVGALYDPLEIWRGYASGPVEGQAIESGHFLAEEAPEATLAALQEFLADG
HHHHCCCCCHHHHCCHHHHHCCCCCCCCCCCEECCCCCHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SGFFEGFSESTADLGDGRHFRLRSGGSGPPLVMLHGMPQTHCMWHRIAPALAARFTVIC
CCHHCCCCCCHHHCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEEC
PDITGYGNSYKPAASADHEAYSKRRMAQDIVDLAAHLGIGRFALVGHDRGARVSHRLALD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEECC
HPDRISRLALLDIIPTIEHFERTDMRFAMGYYHWFFLAQPAPLPEDLINRDAGYWLLSQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHCCCCCEEHHHHH
ARHKTARAVFDEAAMADYRRAMADPATVTAICEDYRAAATIDLEHDRESRARRERIAAPL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHH
KVLWGSRGLVGALYDPLEIWRGYASGPVEGQAIESGHFLAEEAPEATLAALQEFLADG
HHHHCCCCCHHHHCCHHHHHCCCCCCCCCCCEECCCCCHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA