Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148259508

Identifier: 148259508

GI number: 148259508

Start: 547074

End: 547769

Strand: Reverse

Name: 148259508

Synonym: Acry_0492

Alternate gene names: NA

Gene position: 547769-547074 (Counterclockwise)

Preceding gene: 148259510

Following gene: 148259507

Centisome position: 16.16

GC content: 68.97

Gene sequence:

>696_bases
ATGTCCCCACCGCCATTTCGTATCCTCTTCGCCGTCTATCCGGGCATGACCCAGCTCGATTTCACGGGTCCGCACCAGTT
CTTCATCCGCGCGCCGGGATGCGAGGTCATCGTCGCCAGTCGCGATGGCGGCGATGTGCCGAGCGACGGCCTCGTCTTCG
CCCGCACCGCCCGCCTTGCGGACGTTCCCGGCTGTGACCTTCTCTGCGTGCCGGGCGGCACAAACGCGCTCGACGCGGCG
CTGGACGACGGCTTTATCTCCGAACTCCGCCGACTTGCCGCCGATGCACGCTACATCACCTCGGTCTGCACCGGTTCGCT
GATCCTCGGCGCCGCCGGGCTGTTGCGGGGGCGGCGCGCCGCGTGCCACTGGGCGTGGCGAGACCTGCTGAAGCCGTTCG
GCGCAATTCCGGATGACGGCCGCGTGGTGCGCGATGGCAACGTCATCACCGGCGGCGGTGTGACCGCGGGAATTGATTTC
GCGCTCGTGGTCCTCGCCGAGATTGCCGGTCCGCAGGTGGCGCAAACCCTCCAGCTGGGCTTCGAATACGCTCCCGCCCC
ACCCTTCGAGGCTGGGCGCCCGGAACACGCGCCGCCTGACATCCTCGCGGTCTGCCGGCAGGGTCTCGCTCGGCTGGCTG
CGACCCGCGAGGCCCAAACCCGCGAAGCAGCATCCCGCCTCGCCACGCAACATTGA

Upstream 100 bases:

>100_bases
GGATGCCGATATGCCGGGCCATGGCCTGAAATGAGGGATCATGGTCATTTCGTCAATCGTGCCGTCATGGGACACTCGGT
CGCATCATCGGAGATACCCC

Downstream 100 bases:

>100_bases
CTCCGCTGAGGGTGTGAAGCTGTCGATCCTGATGACAACACCAGGCTAGCGGTGGCGCGTTGAACCAGGCCGAGAGACCG
CGCAGGCAAGCGGCCTCCCG

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; Transcriptional Regulator; AraC Family Transcriptional Regulator; DJ-1/PfpI Family Protein; Transcriptional Regulator AraC Family; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Hydratase; Cyclohexyl-Isocyanide Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Transcriptional Regulator DarR; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; AraC Family Transcription Regulator Protein; Transcriptional Regulator ThiJ/PfpI Family Protein

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAA
LDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDF
ALVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH

Sequences:

>Translated_231_residues
MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAA
LDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDF
ALVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH
>Mature_230_residues
SPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLADVPGCDLLCVPGGTNALDAAL
DDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRAACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFA
LVVLAEIAGPQVAQTLQLGFEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24340; Mature: 24209

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLA
CCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHC
DVPGCDLLCVPGGTNALDAALDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRA
CCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFALVVLAEIAGPQVAQTLQLG
HHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHC
FEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPPPFRILFAVYPGMTQLDFTGPHQFFIRAPGCEVIVASRDGGDVPSDGLVFARTARLA
CCCCEEEEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEEEHHHHC
DVPGCDLLCVPGGTNALDAALDDGFISELRRLAADARYITSVCTGSLILGAAGLLRGRRA
CCCCCCEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ACHWAWRDLLKPFGAIPDDGRVVRDGNVITGGGVTAGIDFALVVLAEIAGPQVAQTLQLG
HHHHHHHHHHHHHCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHC
FEYAPAPPFEAGRPEHAPPDILAVCRQGLARLAATREAQTREAASRLATQH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA