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The map label for this gene is hoxN [H]

Identifier: 148259367

GI number: 148259367

Start: 398724

End: 399719

Strand: Reverse

Name: hoxN [H]

Synonym: Acry_0350

Alternate gene names: 148259367

Gene position: 399719-398724 (Counterclockwise)

Preceding gene: 148259369

Following gene: 148259364

Centisome position: 11.79

GC content: 75.9

Gene sequence:

>996_bases
ATGGCGGCGAAGCGGCAGGCAGAACCGGGCGCGGACGCATCGGCGCGGCGGGTGCTGTGGGGGCTCGGCGCCGCCAATGT
CGCCGCCTGGATCTGGGCGGCGGCGGCGTTCGGCGGGGCGCCGCGGCTGCTCGGCATGGCGGGGCTGGCCTGGCTGTTCG
GCCTGCGGCACGCGATGGACGCGGACCATATCGCGGCGATCGACAATGCGGTGCGGCGGCTGGCCGGGCGCGGCCGGGCC
GCGAGCCTCGCCGGGCTGTTCTTCTCGCTCGGGCATTCGAGCGTCGTCGTGCTGCTGGCGGCGGCGGTCTCGTTCGGCGC
GGGGGCGCTGCGGGGGCATCTCGACGCCGTGACGCGCGATGGCGCCTGGATCGGAACGATCGTCTCGGTGGGGTTTCTGG
CGCTGATCGCCGGGGCGAATCTCGTGGCGTTGCGGGCGGAGACGCGCGGCGGCGCGGCGCCGGGGGGCGTGCTGAGCTGG
CTGGCGCGGCCGCTGTTCCGCCTCGTGCGGCGGAGCCGGGACATGTATGCGATCGGGTTCCTGTTCGGCCTCGGCTTCGA
CACCGCGACGGAGATCGGGCTGCTCGCGCTCTCGGCCGCGGGGACGGCGCACGGGATCGCGGCGTGGCGGCTGATGGCGC
TGCCGGCGCTGTTCACCGCCGGGATGTCGCTGGTCGATACCGCCGACAGCGCGCTGATGACGCGGGCCTATGGCTGGGCG
CTGCGCGACGGGCGGGCCCGGCGGCGCTACAACGTGACGCTCACGGCGGTATCGGCCGCGATCGCGGTGGTGGTCGGCGG
CGCGGAATTGCTCGGCCTGGCGGGGGACGGGTTCGGGACCGGGGCGGCGCGGGTGGCGGCGATGCTGGACGCGCACTGGT
CGGGCCTCGGCATGATCATCACGCTGATGCTGGCGGGGCTGTGGCTGGCCGCGATCCGGCGCGGGCGGGCGGGGCGGATC
GCGGAGCGAGCCTCCTCAGCCGCGCCGCCAGGCTGA

Upstream 100 bases:

>100_bases
GCCGGCTTGACCTGCGTCATCGACAGGAAGCGCCGGTTCCTGCGACTCCTCGGGTGACGGGACCGCGGGCGGCGTGCCGG
CGGGATGTCGAGGAGGCCGG

Downstream 100 bases:

>100_bases
TCCGGCGGCGGCTCGGCAGGCGGAGGCGGTGATCGTCGAGGCGGGCCGGGTCGGCGGCGCCGGACGGGCCGGCGAGCCGG
CGGTCGCGCGCGAGGAGGAG

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MAAKRQAEPGADASARRVLWGLGAANVAAWIWAAAAFGGAPRLLGMAGLAWLFGLRHAMDADHIAAIDNAVRRLAGRGRA
ASLAGLFFSLGHSSVVVLLAAAVSFGAGALRGHLDAVTRDGAWIGTIVSVGFLALIAGANLVALRAETRGGAAPGGVLSW
LARPLFRLVRRSRDMYAIGFLFGLGFDTATEIGLLALSAAGTAHGIAAWRLMALPALFTAGMSLVDTADSALMTRAYGWA
LRDGRARRRYNVTLTAVSAAIAVVVGGAELLGLAGDGFGTGAARVAAMLDAHWSGLGMIITLMLAGLWLAAIRRGRAGRI
AERASSAAPPG

Sequences:

>Translated_331_residues
MAAKRQAEPGADASARRVLWGLGAANVAAWIWAAAAFGGAPRLLGMAGLAWLFGLRHAMDADHIAAIDNAVRRLAGRGRA
ASLAGLFFSLGHSSVVVLLAAAVSFGAGALRGHLDAVTRDGAWIGTIVSVGFLALIAGANLVALRAETRGGAAPGGVLSW
LARPLFRLVRRSRDMYAIGFLFGLGFDTATEIGLLALSAAGTAHGIAAWRLMALPALFTAGMSLVDTADSALMTRAYGWA
LRDGRARRRYNVTLTAVSAAIAVVVGGAELLGLAGDGFGTGAARVAAMLDAHWSGLGMIITLMLAGLWLAAIRRGRAGRI
AERASSAAPPG
>Mature_330_residues
AAKRQAEPGADASARRVLWGLGAANVAAWIWAAAAFGGAPRLLGMAGLAWLFGLRHAMDADHIAAIDNAVRRLAGRGRAA
SLAGLFFSLGHSSVVVLLAAAVSFGAGALRGHLDAVTRDGAWIGTIVSVGFLALIAGANLVALRAETRGGAAPGGVLSWL
ARPLFRLVRRSRDMYAIGFLFGLGFDTATEIGLLALSAAGTAHGIAAWRLMALPALFTAGMSLVDTADSALMTRAYGWAL
RDGRARRRYNVTLTAVSAAIAVVVGGAELLGLAGDGFGTGAARVAAMLDAHWSGLGMIITLMLAGLWLAAIRRGRAGRIA
ERASSAAPPG

Specific function: High-affinity nickel transporter responsible for nickel uptake. Necessary for high levels of activity of hydrogenase and urease [H]

COG id: COG3376

COG function: function code P; High-affinity nickel permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004688
- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 33870; Mature: 33739

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKRQAEPGADASARRVLWGLGAANVAAWIWAAAAFGGAPRLLGMAGLAWLFGLRHAMD
CCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ADHIAAIDNAVRRLAGRGRAASLAGLFFSLGHSSVVVLLAAAVSFGAGALRGHLDAVTRD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GAWIGTIVSVGFLALIAGANLVALRAETRGGAAPGGVLSWLARPLFRLVRRSRDMYAIGF
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHH
LFGLGFDTATEIGLLALSAAGTAHGIAAWRLMALPALFTAGMSLVDTADSALMTRAYGWA
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRDGRARRRYNVTLTAVSAAIAVVVGGAELLGLAGDGFGTGAARVAAMLDAHWSGLGMII
HCCCCCCCEEEEEHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHH
TLMLAGLWLAAIRRGRAGRIAERASSAAPPG
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
AAKRQAEPGADASARRVLWGLGAANVAAWIWAAAAFGGAPRLLGMAGLAWLFGLRHAMD
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
ADHIAAIDNAVRRLAGRGRAASLAGLFFSLGHSSVVVLLAAAVSFGAGALRGHLDAVTRD
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GAWIGTIVSVGFLALIAGANLVALRAETRGGAAPGGVLSWLARPLFRLVRRSRDMYAIGF
CCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEHHH
LFGLGFDTATEIGLLALSAAGTAHGIAAWRLMALPALFTAGMSLVDTADSALMTRAYGWA
HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LRDGRARRRYNVTLTAVSAAIAVVVGGAELLGLAGDGFGTGAARVAAMLDAHWSGLGMII
HCCCCCCCEEEEEHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHCCCHHHHHH
TLMLAGLWLAAIRRGRAGRIAERASSAAPPG
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1847142; 7896709; 12948488; 7934894 [H]