| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259361
Identifier: 148259361
GI number: 148259361
Start: 391239
End: 391916
Strand: Reverse
Name: 148259361
Synonym: Acry_0342
Alternate gene names: NA
Gene position: 391916-391239 (Counterclockwise)
Preceding gene: 148259362
Following gene: 148259360
Centisome position: 11.56
GC content: 76.4
Gene sequence:
>678_bases ATGGCCCGCACACCGAAACACGCCCCGCTCCTTTCGCTGCTGACCGCCGCGGCGGCCGCGGTGCCGCCGCTGCCGACGGC GCTCGCCGTGATGGCGCCGGCGGGCGCGGCACTGGCCGCCGCACCGGGCGCGACGGCGTCGACGACGCTGGCGCAGGCGA TCGCGCGCGGCGACACGCAGATCGCGCCGGCCGGCGTGCGGGCGCTGATCATGGCGCAGCGGCGGGATTTCACGCTGATC GACATCCGCGCGCCGAAGGAGTTCGCCGCCGGGCATATCCGCGACGCGCGCAACGTTCCGATATCGCAACTTGCTATGCC GCAGGAGATCAACCGCCTGCGCCGCTCGCCGCAGGTGATCTTGTATGGCAACGCCACGGACAAGGCGGCCGAGGCGGCGG TGATGCTCCGGGCCTCGGGGGTGATGGCGCGGGCGATGACGGGCGGGCTCGCGGCGTGGGGACAGGCGCTGGAGGCGGCG GCGGCGCGGCCGGACCAGGCGGCGATGGTGCGGGCGCTCAACCTCTGCCCCGAGATCGTGGCGACGCCGATCGCGCCGGC CCCGGCCGCACCCGAGGCGGCCCCCGCCGCGCCGCAGGCGGCCCCCGCCGCGCCGCAGGCGGCACCGAAGGCGCCGGCCG GAACGGCGCCGGTCAATCTGAACGGCATGTGCGGCTGA
Upstream 100 bases:
>100_bases TGGCGGAGCTTCCACAACCAGTTTAACGCCGCCCTGCTCGACCGCCTGCGCCATGACGGCGAGAACCCGAACGGCCGCTT CTAGAAGGAACGCAACCATC
Downstream 100 bases:
>100_bases GCGCGGAATTCGGGACGACGGGAGGCCGGGATGGACCAGTTCGGCGCCATGCGCCTCGGCGGCAACGCGGAGCGGGCGAG TGCGGACCAGGCGCTGACCG
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MARTPKHAPLLSLLTAAAAAVPPLPTALAVMAPAGAALAAAPGATASTTLAQAIARGDTQIAPAGVRALIMAQRRDFTLI DIRAPKEFAAGHIRDARNVPISQLAMPQEINRLRRSPQVILYGNATDKAAEAAVMLRASGVMARAMTGGLAAWGQALEAA AARPDQAAMVRALNLCPEIVATPIAPAPAAPEAAPAAPQAAPAAPQAAPKAPAGTAPVNLNGMCG
Sequences:
>Translated_225_residues MARTPKHAPLLSLLTAAAAAVPPLPTALAVMAPAGAALAAAPGATASTTLAQAIARGDTQIAPAGVRALIMAQRRDFTLI DIRAPKEFAAGHIRDARNVPISQLAMPQEINRLRRSPQVILYGNATDKAAEAAVMLRASGVMARAMTGGLAAWGQALEAA AARPDQAAMVRALNLCPEIVATPIAPAPAAPEAAPAAPQAAPAAPQAAPKAPAGTAPVNLNGMCG >Mature_224_residues ARTPKHAPLLSLLTAAAAAVPPLPTALAVMAPAGAALAAAPGATASTTLAQAIARGDTQIAPAGVRALIMAQRRDFTLID IRAPKEFAAGHIRDARNVPISQLAMPQEINRLRRSPQVILYGNATDKAAEAAVMLRASGVMARAMTGGLAAWGQALEAAA ARPDQAAMVRALNLCPEIVATPIAPAPAAPEAAPAAPQAAPAAPQAAPKAPAGTAPVNLNGMCG
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22505; Mature: 22374
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTPKHAPLLSLLTAAAAAVPPLPTALAVMAPAGAALAAAPGATASTTLAQAIARGDTQ CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCC IAPAGVRALIMAQRRDFTLIDIRAPKEFAAGHIRDARNVPISQLAMPQEINRLRRSPQVI CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCEE LYGNATDKAAEAAVMLRASGVMARAMTGGLAAWGQALEAAAARPDQAAMVRALNLCPEIV EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHH ATPIAPAPAAPEAAPAAPQAAPAAPQAAPKAPAGTAPVNLNGMCG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARTPKHAPLLSLLTAAAAAVPPLPTALAVMAPAGAALAAAPGATASTTLAQAIARGDTQ CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHCCCCC IAPAGVRALIMAQRRDFTLIDIRAPKEFAAGHIRDARNVPISQLAMPQEINRLRRSPQVI CCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCEE LYGNATDKAAEAAVMLRASGVMARAMTGGLAAWGQALEAAAARPDQAAMVRALNLCPEIV EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHH ATPIAPAPAAPEAAPAAPQAAPAAPQAAPKAPAGTAPVNLNGMCG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA