| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259307
Identifier: 148259307
GI number: 148259307
Start: 329312
End: 330535
Strand: Reverse
Name: 148259307
Synonym: Acry_0287
Alternate gene names: NA
Gene position: 330535-329312 (Counterclockwise)
Preceding gene: 148259308
Following gene: 148259306
Centisome position: 9.75
GC content: 62.17
Gene sequence:
>1224_bases ATGGCACGACGGAGAGCGCCGGCGATCCCGGACGAATTGCTGGACCAGCTTCTGGCTGGGGGAGACGCGGCGGCAGCGCT GAATTCCGGGGATCTGGTGAACGCGCTGAAGAAGGCTCTGGCGGAGCGGGCCCTGAGCGCGGAGATGGATTACCATCTGA GTGACGAAGCGGAGGCGGAGAACAGCCGCAACGGCTATGGCCGCAAGTCGGTATCGACCGGCACGGGGAAGATCGAGATT GCGATCCCGCGAGACCGTGCGGGTAGCTTTGATCCGCAGTTGATCGCCAAATGCCAGCGCCGGTTTCCAGGCTTCGATGA CAAGATCATCTCGATGTATGCGCGGGGGATGAGCACCCGGGAGATCGCGGAACATCTGCGCGAGATCTACGGCATGGATG CCTCGGCGGAGCTGATCAGCACGATCACCGATGCGGTTCTGGACGAGGTGACATCCTGGCAGCAGCGTCCGCTGGACCCG GTCTATCCGCTGGTATTCTTCGATGCCATCCGGGTGAAGATCCGCGACGAGGGCGTGGTCCGCAACAAGGCGATCCATAT CGCGCTGGGGGTTATGGCCGACGGGACGAAGGTCGTACTCGGGATGTGGATCGAGCAGAACGAAGGCGCCAAATTCTGGC TGCGCGTGATGAACGAGCTGAAGAACCGCGGCGTCGAGGACATCCTGCTGGCGGTGGTCGATGGCCTCAAGGGGTTCCCG GAGGCGATCACGGCCGTCTTTCCCGAGACGATCGTGCAGACCTGCATCGTCCATCTGCTCCGGAATTCGATGGATTTCGT GTCCTACAAGGACCGCAAGGCGGTGGCCACCGCCCTCAAGGACATCTACCGGGCCGTTGATGCCAGGGCCGCCGAGGCCG CTCTCGCCGATTTCGAGGCCGGTCCATGGGGCCAGAAATACCCCGCCATCGGCCAGAGCTGGCGCCGGGTATGGCAGGAA GTCATCCCTTTCTTCGGCTTTCCGGGCGACGTTCGTCGGATCATTTATACAACGAACGCCATAGAAGCTTTGAATTCCAA GCTGCGCCGGGCCATCCGCGCGCGCGGCCATTTCCCCAGCGATGAGGCCGCGGCCAAGCTGCTCTATCTGATCCTGAACC GATCCGAAAAAGAGTGGGTGATGCCACCTCGAGAATGGGCTATGGCAAAGGCTCAGTTCGCCGTCATCTTCGGCGATCGC TTCGTAAGAGCCCTGGCGGCCTGA
Upstream 100 bases:
>100_bases CGTGGCCTGTCTTTTTTTACGCGTCATGCCGCGGCGGATGAAGAGGCAGTGTGCTGAATTTCGTGTGTGAGTGGCATAGC GGGTAGAAAGGAAGACCCAT
Downstream 100 bases:
>100_bases TGTTCAACCGCCGCCCATACACGGAATTCCTGACACTGCCGATGAAGAAGCGGTGAAGCCCGGCCACCGAGACGTGCAAG CCGACCTCGATCAGCGCCAG
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MARRRAPAIPDELLDQLLAGGDAAAALNSGDLVNALKKALAERALSAEMDYHLSDEAEAENSRNGYGRKSVSTGTGKIEI AIPRDRAGSFDPQLIAKCQRRFPGFDDKIISMYARGMSTREIAEHLREIYGMDASAELISTITDAVLDEVTSWQQRPLDP VYPLVFFDAIRVKIRDEGVVRNKAIHIALGVMADGTKVVLGMWIEQNEGAKFWLRVMNELKNRGVEDILLAVVDGLKGFP EAITAVFPETIVQTCIVHLLRNSMDFVSYKDRKAVATALKDIYRAVDARAAEAALADFEAGPWGQKYPAIGQSWRRVWQE VIPFFGFPGDVRRIIYTTNAIEALNSKLRRAIRARGHFPSDEAAAKLLYLILNRSEKEWVMPPREWAMAKAQFAVIFGDR FVRALAA
Sequences:
>Translated_407_residues MARRRAPAIPDELLDQLLAGGDAAAALNSGDLVNALKKALAERALSAEMDYHLSDEAEAENSRNGYGRKSVSTGTGKIEI AIPRDRAGSFDPQLIAKCQRRFPGFDDKIISMYARGMSTREIAEHLREIYGMDASAELISTITDAVLDEVTSWQQRPLDP VYPLVFFDAIRVKIRDEGVVRNKAIHIALGVMADGTKVVLGMWIEQNEGAKFWLRVMNELKNRGVEDILLAVVDGLKGFP EAITAVFPETIVQTCIVHLLRNSMDFVSYKDRKAVATALKDIYRAVDARAAEAALADFEAGPWGQKYPAIGQSWRRVWQE VIPFFGFPGDVRRIIYTTNAIEALNSKLRRAIRARGHFPSDEAAAKLLYLILNRSEKEWVMPPREWAMAKAQFAVIFGDR FVRALAA >Mature_406_residues ARRRAPAIPDELLDQLLAGGDAAAALNSGDLVNALKKALAERALSAEMDYHLSDEAEAENSRNGYGRKSVSTGTGKIEIA IPRDRAGSFDPQLIAKCQRRFPGFDDKIISMYARGMSTREIAEHLREIYGMDASAELISTITDAVLDEVTSWQQRPLDPV YPLVFFDAIRVKIRDEGVVRNKAIHIALGVMADGTKVVLGMWIEQNEGAKFWLRVMNELKNRGVEDILLAVVDGLKGFPE AITAVFPETIVQTCIVHLLRNSMDFVSYKDRKAVATALKDIYRAVDARAAEAALADFEAGPWGQKYPAIGQSWRRVWQEV IPFFGFPGDVRRIIYTTNAIEALNSKLRRAIRARGHFPSDEAAAKLLYLILNRSEKEWVMPPREWAMAKAQFAVIFGDRF VRALAA
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45352; Mature: 45220
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRRAPAIPDELLDQLLAGGDAAAALNSGDLVNALKKALAERALSAEMDYHLSDEAEAE CCCCCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC NSRNGYGRKSVSTGTGKIEIAIPRDRAGSFDPQLIAKCQRRFPGFDDKIISMYARGMSTR CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHH EIAEHLREIYGMDASAELISTITDAVLDEVTSWQQRPLDPVYPLVFFDAIRVKIRDEGVV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCC RNKAIHIALGVMADGTKVVLGMWIEQNEGAKFWLRVMNELKNRGVEDILLAVVDGLKGFP HHCEEEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH EAITAVFPETIVQTCIVHLLRNSMDFVSYKDRKAVATALKDIYRAVDARAAEAALADFEA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPWGQKYPAIGQSWRRVWQEVIPFFGFPGDVRRIIYTTNAIEALNSKLRRAIRARGHFPS CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEAAAKLLYLILNRSEKEWVMPPREWAMAKAQFAVIFGDRFVRALAA HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARRRAPAIPDELLDQLLAGGDAAAALNSGDLVNALKKALAERALSAEMDYHLSDEAEAE CCCCCCCCCHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCC NSRNGYGRKSVSTGTGKIEIAIPRDRAGSFDPQLIAKCQRRFPGFDDKIISMYARGMSTR CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCHH EIAEHLREIYGMDASAELISTITDAVLDEVTSWQQRPLDPVYPLVFFDAIRVKIRDEGVV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCC RNKAIHIALGVMADGTKVVLGMWIEQNEGAKFWLRVMNELKNRGVEDILLAVVDGLKGFP HHCEEEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHH EAITAVFPETIVQTCIVHLLRNSMDFVSYKDRKAVATALKDIYRAVDARAAEAALADFEA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GPWGQKYPAIGQSWRRVWQEVIPFFGFPGDVRRIIYTTNAIEALNSKLRRAIRARGHFPS CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEAAAKLLYLILNRSEKEWVMPPREWAMAKAQFAVIFGDRFVRALAA HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]