| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259306
Identifier: 148259306
GI number: 148259306
Start: 327029
End: 328759
Strand: Reverse
Name: 148259306
Synonym: Acry_0286
Alternate gene names: NA
Gene position: 328759-327029 (Counterclockwise)
Preceding gene: 148259307
Following gene: 148259303
Centisome position: 9.7
GC content: 38.65
Gene sequence:
>1731_bases GTGTCTCCGCTCGTCATCGCAAACGAACTGAATCATAACCTACTAAAATCGTTCAACTATCATTTTTCAGTCCGACCTTC AGTCAGGACGAGAGCACTGGGAGACAGCATGCATCGAATTACCGTTTCGTTTGGTCGGATTCGCCCGGTTGCCTCCGTGA TAATCGGCATGACTGTTCTTTTAACGAATGCAGCGGTTGTGTGCATAATTGCTAGGTCACTCGGCGCCGACATCAATTGG GACCTCTTGAATTATCATTTCTACAATGGGTATCTTTGGGCGCATGGAAAATTGATACAAGACTCTCTATGCACAGAACA ATCATATCTAGACCCTAGATTAAATTTCTTCTATTATTTACTTATTAGAAATTTTGCTCCATTGACGGTAAATCTAATTA TCGCCGGATTTCAATCATTAGGAATTTCTGCTGCTTGGCTGCTCTGCTTTCATCTACTCAAAATATACAATATTCGTACG CGGCTTATCCTATCATCTGTCGCGGCAATATCGGCGATTATTGGTCCCATTTTTTGGTCAGAAATTGGGGGCACTATGGG TGATACCTTACTCGCTTCACCCATTATACTTGCAATTTTTTTTTCATTGATCAGTCAGGAGCGGGATAGACTGATATACC TTTTCTTCGCCGGGCTCCTTGTGGGCTTTGTGGCCGGATTAAAATTCACCAACATGATCTATGCAGTTGGCTTTGTTTTC GCTTTCATTCTGACCACCCTCTATCGATACAAATTTAATATTCGTCGACTCGTCATAGTTGAAACTATATTCTGTTTTTC ATTTTTATCTGGATTCGTTTTATTATATTTTAATATAGGATATTTACTTTTTGTGACGTACAAAAACCCTATATTTCCGT ATTTTAATAATATATTTCATTCTCCATATATTGGCAACTATGCGATTCGTGATGAGCGTTGGTTTCCTCAAAATTTAATT GGATATATTACTTTGCCATTCGAATTTGTTGTTCGTCATCATCCGAAACCAAATCAACAACATATAATAGGCATGGAAAT TCCATTTAGAACAATTTTCCCTGCTCTTTATTTTATAATTTCTCCATCAATATTATTGTATTTATATTTCAAAAAAATCA AGAATAATGAACTATATGATATATTTTTTGTTCTTAGTTTTTTTGCTGGATCTTTCTTTGTTTGGGAAGAAGTTTTTTCA TATTATCGATATTTTGCTGCCGCTGAAATGATTTTCCCAACTATTCTCTTGGTCCTGCTGGTTCGATGGGGCAGATTAAT CATGCATTGGCGACATCACAGCATGACCTATGTGGCTGCAGCCTTACTTGTGGCCACAGCCGCGGCCTATAGCTTGCCTG ATTCTAACTGGGGTCGTGAGGCATTCTCTTCGTCATACTTTGGCGCAAGTAAGAGAGAATTTAAGTCATACAACAATGCT CTTTTAATTGTTGGTTTTCGTCCGTTAGGGTTTATACTTCCCTATTTTCCGCTTGATGACAGGATCATCGGATTACCAGA ACATCTCGGAATAACCCAGAAGTTTCAGAAAAAGTATCTAAGGCCTCTCCTTGATTACAAGAATATATATTATTTGACGG ATGCCGCAGAAATAAAAAATGATCGCGAATTGCCAGCACATTATGGCGTTACAGTCAATTACGAGAATTGCTCAATATAC AAGACATCTATATATCCCGTAGCAGTGTGTCCGGTTCAGCATACCCCCTAG
Upstream 100 bases:
>100_bases TAACGGTTCAATGAAGGCCCATTCGGCATCGGTGAGGTCTCTTGCGTAGCGCAATTCGGCCCTGCAATATCGTTGCCGGG CGATTTTAGTCTAGGCCATC
Downstream 100 bases:
>100_bases GTTCCGTACCTATTGCCATGACTAAGGGGGGGGGGGGGACTCCCCACCAATGATCAAGCTGATTTTGGGCGATCGGTGGG CATCTTCTCGGGATCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 576; Mature: 575
Protein sequence:
>576_residues MSPLVIANELNHNLLKSFNYHFSVRPSVRTRALGDSMHRITVSFGRIRPVASVIIGMTVLLTNAAVVCIIARSLGADINW DLLNYHFYNGYLWAHGKLIQDSLCTEQSYLDPRLNFFYYLLIRNFAPLTVNLIIAGFQSLGISAAWLLCFHLLKIYNIRT RLILSSVAAISAIIGPIFWSEIGGTMGDTLLASPIILAIFFSLISQERDRLIYLFFAGLLVGFVAGLKFTNMIYAVGFVF AFILTTLYRYKFNIRRLVIVETIFCFSFLSGFVLLYFNIGYLLFVTYKNPIFPYFNNIFHSPYIGNYAIRDERWFPQNLI GYITLPFEFVVRHHPKPNQQHIIGMEIPFRTIFPALYFIISPSILLYLYFKKIKNNELYDIFFVLSFFAGSFFVWEEVFS YYRYFAAAEMIFPTILLVLLVRWGRLIMHWRHHSMTYVAAALLVATAAAYSLPDSNWGREAFSSSYFGASKREFKSYNNA LLIVGFRPLGFILPYFPLDDRIIGLPEHLGITQKFQKKYLRPLLDYKNIYYLTDAAEIKNDRELPAHYGVTVNYENCSIY KTSIYPVAVCPVQHTP
Sequences:
>Translated_576_residues MSPLVIANELNHNLLKSFNYHFSVRPSVRTRALGDSMHRITVSFGRIRPVASVIIGMTVLLTNAAVVCIIARSLGADINW DLLNYHFYNGYLWAHGKLIQDSLCTEQSYLDPRLNFFYYLLIRNFAPLTVNLIIAGFQSLGISAAWLLCFHLLKIYNIRT RLILSSVAAISAIIGPIFWSEIGGTMGDTLLASPIILAIFFSLISQERDRLIYLFFAGLLVGFVAGLKFTNMIYAVGFVF AFILTTLYRYKFNIRRLVIVETIFCFSFLSGFVLLYFNIGYLLFVTYKNPIFPYFNNIFHSPYIGNYAIRDERWFPQNLI GYITLPFEFVVRHHPKPNQQHIIGMEIPFRTIFPALYFIISPSILLYLYFKKIKNNELYDIFFVLSFFAGSFFVWEEVFS YYRYFAAAEMIFPTILLVLLVRWGRLIMHWRHHSMTYVAAALLVATAAAYSLPDSNWGREAFSSSYFGASKREFKSYNNA LLIVGFRPLGFILPYFPLDDRIIGLPEHLGITQKFQKKYLRPLLDYKNIYYLTDAAEIKNDRELPAHYGVTVNYENCSIY KTSIYPVAVCPVQHTP >Mature_575_residues SPLVIANELNHNLLKSFNYHFSVRPSVRTRALGDSMHRITVSFGRIRPVASVIIGMTVLLTNAAVVCIIARSLGADINWD LLNYHFYNGYLWAHGKLIQDSLCTEQSYLDPRLNFFYYLLIRNFAPLTVNLIIAGFQSLGISAAWLLCFHLLKIYNIRTR LILSSVAAISAIIGPIFWSEIGGTMGDTLLASPIILAIFFSLISQERDRLIYLFFAGLLVGFVAGLKFTNMIYAVGFVFA FILTTLYRYKFNIRRLVIVETIFCFSFLSGFVLLYFNIGYLLFVTYKNPIFPYFNNIFHSPYIGNYAIRDERWFPQNLIG YITLPFEFVVRHHPKPNQQHIIGMEIPFRTIFPALYFIISPSILLYLYFKKIKNNELYDIFFVLSFFAGSFFVWEEVFSY YRYFAAAEMIFPTILLVLLVRWGRLIMHWRHHSMTYVAAALLVATAAAYSLPDSNWGREAFSSSYFGASKREFKSYNNAL LIVGFRPLGFILPYFPLDDRIIGLPEHLGITQKFQKKYLRPLLDYKNIYYLTDAAEIKNDRELPAHYGVTVNYENCSIYK TSIYPVAVCPVQHTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66528; Mature: 66397
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLVIANELNHNLLKSFNYHFSVRPSVRTRALGDSMHRITVSFGRIRPVASVIIGMTVL CCCEEEEHHCCHHHHHHCCCCEEECCCHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHH LTNAAVVCIIARSLGADINWDLLNYHFYNGYLWAHGKLIQDSLCTEQSYLDPRLNFFYYL HHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEECCCHHHHHHHCHHHHCCHHHHHHHHH LIRNFAPLTVNLIIAGFQSLGISAAWLLCFHLLKIYNIRTRLILSSVAAISAIIGPIFWS HHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIGGTMGDTLLASPIILAIFFSLISQERDRLIYLFFAGLLVGFVAGLKFTNMIYAVGFVF HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFILTTLYRYKFNIRRLVIVETIFCFSFLSGFVLLYFNIGYLLFVTYKNPIFPYFNNIFH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCC SPYIGNYAIRDERWFPQNLIGYITLPFEFVVRHHPKPNQQHIIGMEIPFRTIFPALYFII CCCCCCEEECCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHH SPSILLYLYFKKIKNNELYDIFFVLSFFAGSFFVWEEVFSYYRYFAAAEMIFPTILLVLL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRWGRLIMHWRHHSMTYVAAALLVATAAAYSLPDSNWGREAFSSSYFGASKREFKSYNNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHCCCCE LLIVGFRPLGFILPYFPLDDRIIGLPEHLGITQKFQKKYLRPLLDYKNIYYLTDAAEIKN EEEEECCHHHHHCCCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHCC DRELPAHYGVTVNYENCSIYKTSIYPVAVCPVQHTP CCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCCC >Mature Secondary Structure SPLVIANELNHNLLKSFNYHFSVRPSVRTRALGDSMHRITVSFGRIRPVASVIIGMTVL CCEEEEHHCCHHHHHHCCCCEEECCCHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHH LTNAAVVCIIARSLGADINWDLLNYHFYNGYLWAHGKLIQDSLCTEQSYLDPRLNFFYYL HHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEECCCHHHHHHHCHHHHCCHHHHHHHHH LIRNFAPLTVNLIIAGFQSLGISAAWLLCFHLLKIYNIRTRLILSSVAAISAIIGPIFWS HHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIGGTMGDTLLASPIILAIFFSLISQERDRLIYLFFAGLLVGFVAGLKFTNMIYAVGFVF HHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFILTTLYRYKFNIRRLVIVETIFCFSFLSGFVLLYFNIGYLLFVTYKNPIFPYFNNIFH HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHCC SPYIGNYAIRDERWFPQNLIGYITLPFEFVVRHHPKPNQQHIIGMEIPFRTIFPALYFII CCCCCCEEECCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHH SPSILLYLYFKKIKNNELYDIFFVLSFFAGSFFVWEEVFSYYRYFAAAEMIFPTILLVLL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRWGRLIMHWRHHSMTYVAAALLVATAAAYSLPDSNWGREAFSSSYFGASKREFKSYNNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHCCCCE LLIVGFRPLGFILPYFPLDDRIIGLPEHLGITQKFQKKYLRPLLDYKNIYYLTDAAEIKN EEEEECCHHHHHCCCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCCEEEEECHHHHCC DRELPAHYGVTVNYENCSIYKTSIYPVAVCPVQHTP CCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA