Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148259258

Identifier: 148259258

GI number: 148259258

Start: 274854

End: 275348

Strand: Reverse

Name: 148259258

Synonym: Acry_0238

Alternate gene names: NA

Gene position: 275348-274854 (Counterclockwise)

Preceding gene: 148259263

Following gene: 148259257

Centisome position: 8.12

GC content: 69.7

Gene sequence:

>495_bases
ATGAGCCAGTCCCTGCCTTTCGATGCCGAAGCGGCGCGCGACGCCTGGCTGACCCGCGATGTCTGGCCGCGCCGCATCAT
CGCCTTTCTTGTCGACATGGTGCTTCTCGCCGTGCTGAGCGTCGCTGTCTGGTGGGTGATCGTGGTGCTCGGCATCGCAA
CGTTCGGCCTCGGTTTCCTGCTGCTGCATTTCACCTGGGCCGTCCCGCCGCTCTATTACATCCTGTGGCTGTGCTCGTCC
GCCGCGGCGACGCCGGGGCAGCGCCTGCTGGGTCTCACGCTCCGGCAGGACGATACGCTGGAGGCGAGCGTTGCCCTGCG
GCCGAGCTTCGCCCAGGCGCTGGCCTGGACGGTGCTGCTCGGCGTGTCCTTCATGCTCGGCATGGTGCCCTTCCTGCTGG
TGCTGGTCACCCGCCGCCGCCGCGCGGGGCATGACCTGCTCTCGGGCCTCACGGTCGTCCACACCTCGGCGCTGGGGCGC
CCTGCCGCGCCGTGA

Upstream 100 bases:

>100_bases
GATCCGTGGCGCGTGTAGCAACCGCTCCCGCCGCTGTCCATGACGCGCGGGCAGTGCAGGCCATTGCGCGCGCCCCGCCC
GGCACACTATCTTGGAGAGC

Downstream 100 bases:

>100_bases
CCGTCCCTGGCCGCCCGCCGCAGTTCTTCTACGCCACGGCCCCGCTACCCTGCCCTTATGTCGCGGGGCGGACCGAGCGG
AAGGTGGTTACCGAACTCAC

Product: RDD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSS
AAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGR
PAAP

Sequences:

>Translated_164_residues
MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSS
AAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGR
PAAP
>Mature_163_residues
SQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSSA
AATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRP
AAP

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17993; Mature: 17861

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHFTWAVPPLYYILWLCSSAAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHH
GVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRPAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHFTWAVPPLYYILWLCSSAAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHH
GVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRPAAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA