| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259258
Identifier: 148259258
GI number: 148259258
Start: 274854
End: 275348
Strand: Reverse
Name: 148259258
Synonym: Acry_0238
Alternate gene names: NA
Gene position: 275348-274854 (Counterclockwise)
Preceding gene: 148259263
Following gene: 148259257
Centisome position: 8.12
GC content: 69.7
Gene sequence:
>495_bases ATGAGCCAGTCCCTGCCTTTCGATGCCGAAGCGGCGCGCGACGCCTGGCTGACCCGCGATGTCTGGCCGCGCCGCATCAT CGCCTTTCTTGTCGACATGGTGCTTCTCGCCGTGCTGAGCGTCGCTGTCTGGTGGGTGATCGTGGTGCTCGGCATCGCAA CGTTCGGCCTCGGTTTCCTGCTGCTGCATTTCACCTGGGCCGTCCCGCCGCTCTATTACATCCTGTGGCTGTGCTCGTCC GCCGCGGCGACGCCGGGGCAGCGCCTGCTGGGTCTCACGCTCCGGCAGGACGATACGCTGGAGGCGAGCGTTGCCCTGCG GCCGAGCTTCGCCCAGGCGCTGGCCTGGACGGTGCTGCTCGGCGTGTCCTTCATGCTCGGCATGGTGCCCTTCCTGCTGG TGCTGGTCACCCGCCGCCGCCGCGCGGGGCATGACCTGCTCTCGGGCCTCACGGTCGTCCACACCTCGGCGCTGGGGCGC CCTGCCGCGCCGTGA
Upstream 100 bases:
>100_bases GATCCGTGGCGCGTGTAGCAACCGCTCCCGCCGCTGTCCATGACGCGCGGGCAGTGCAGGCCATTGCGCGCGCCCCGCCC GGCACACTATCTTGGAGAGC
Downstream 100 bases:
>100_bases CCGTCCCTGGCCGCCCGCCGCAGTTCTTCTACGCCACGGCCCCGCTACCCTGCCCTTATGTCGCGGGGCGGACCGAGCGG AAGGTGGTTACCGAACTCAC
Product: RDD domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSS AAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGR PAAP
Sequences:
>Translated_164_residues MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSS AAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGR PAAP >Mature_163_residues SQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFLLLHFTWAVPPLYYILWLCSSA AATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLLGVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRP AAP
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17993; Mature: 17861
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHFTWAVPPLYYILWLCSSAAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHH GVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRPAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQSLPFDAEAARDAWLTRDVWPRRIIAFLVDMVLLAVLSVAVWWVIVVLGIATFGLGFL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLHFTWAVPPLYYILWLCSSAAATPGQRLLGLTLRQDDTLEASVALRPSFAQALAWTVLL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHH GVSFMLGMVPFLLVLVTRRRRAGHDLLSGLTVVHTSALGRPAAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA