| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is ate [H]
Identifier: 148259257
GI number: 148259257
Start: 274069
End: 274857
Strand: Reverse
Name: ate [H]
Synonym: Acry_0237
Alternate gene names: 148259257
Gene position: 274857-274069 (Counterclockwise)
Preceding gene: 148259258
Following gene: 148259256
Centisome position: 8.11
GC content: 68.06
Gene sequence:
>789_bases GTGACCGTCCCTGGCCGCCCGCCGCAGTTCTTCTACGCCACGGCCCCGCTACCCTGCCCTTATGTCGCGGGGCGGACCGA GCGGAAGGTGGTTACCGAACTCACCGGCGCGGATGCCGACGCGCTGCACAACCGGCTCTCGCGCGGCGGGTTCCGGCGCA GCCACAACATCGCCTATGCGCCGGTTTGCGCGGGCTGCCGCTCCTGCATCCCGATCCGCATCGTCAGCGACCGGTTCCGG CAGAGCCGGACCCATCGACGGATCATCGCCGCGAATGCCGGGCTGCGCGCCTATGAGATGCCGCCGCGCGCCACGGCCGA GCAGTTCAAGCTGTTCCAGCGCTACCAGCAGGCCCGCCACGGCGAGGGCGATATGGCTGGCATGAGCTTCTACGACTATC GCGCCATGGTCGAGGATACGCCGATCGAGACCTGGCTTGTGGAGTTTCGCGACGGCGCGGACGAACTGGTCGGCGCCTGC CTGACCGACCGCCTTGCCGACGGGCTTTCCGCCGTATATTCCTTCTTCGCGCCGGATCTCACTCGGCAGTCGCTGGGGAC GCGTTCGATCCTGTGGCTGGTGGAGCGCACGCGGGAACTCGGCCTGCCCTATGTCTATCTCGGCTACTGGGTGCCGGAGA GTCCGAAAATGGCCTATAAGGCGCGCTTCCGCCCGGCCGAAATCCTGCTCGGCGGCACCTGGACAGAACTGACGGACAGC CTCGCCGCGGCCGACGATCCCCCATCCTGGCCGCTTCATCTGGCGCCGGTGCAGCAATGCGGCCCCTGA
Upstream 100 bases:
>100_bases TCCTGCTGGTGCTGGTCACCCGCCGCCGCCGCGCGGGGCATGACCTGCTCTCGGGCCTCACGGTCGTCCACACCTCGGCG CTGGGGCGCCCTGCCGCGCC
Downstream 100 bases:
>100_bases ACGCGCCGCTCACGGCGGATTGATGAGCGTGCCCGATCCGGGCCCTTGTTCCGCCATGATGACGATCGAGACTGCCCGCA TGCCAAAGGAGAATGCCATG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTVPGRPPQFFYATAPLPCPYVAGRTERKVVTELTGADADALHNRLSRGGFRRSHNIAYAPVCAGCRSCIPIRIVSDRFR QSRTHRRIIAANAGLRAYEMPPRATAEQFKLFQRYQQARHGEGDMAGMSFYDYRAMVEDTPIETWLVEFRDGADELVGAC LTDRLADGLSAVYSFFAPDLTRQSLGTRSILWLVERTRELGLPYVYLGYWVPESPKMAYKARFRPAEILLGGTWTELTDS LAAADDPPSWPLHLAPVQQCGP
Sequences:
>Translated_262_residues MTVPGRPPQFFYATAPLPCPYVAGRTERKVVTELTGADADALHNRLSRGGFRRSHNIAYAPVCAGCRSCIPIRIVSDRFR QSRTHRRIIAANAGLRAYEMPPRATAEQFKLFQRYQQARHGEGDMAGMSFYDYRAMVEDTPIETWLVEFRDGADELVGAC LTDRLADGLSAVYSFFAPDLTRQSLGTRSILWLVERTRELGLPYVYLGYWVPESPKMAYKARFRPAEILLGGTWTELTDS LAAADDPPSWPLHLAPVQQCGP >Mature_261_residues TVPGRPPQFFYATAPLPCPYVAGRTERKVVTELTGADADALHNRLSRGGFRRSHNIAYAPVCAGCRSCIPIRIVSDRFRQ SRTHRRIIAANAGLRAYEMPPRATAEQFKLFQRYQQARHGEGDMAGMSFYDYRAMVEDTPIETWLVEFRDGADELVGACL TDRLADGLSAVYSFFAPDLTRQSLGTRSILWLVERTRELGLPYVYLGYWVPESPKMAYKARFRPAEILLGGTWTELTDSL AAADDPPSWPLHLAPVQQCGP
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI32563965, Length=147, Percent_Identity=31.9727891156463, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI32563963, Length=147, Percent_Identity=31.9727891156463, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 29390; Mature: 29259
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPGRPPQFFYATAPLPCPYVAGRTERKVVTELTGADADALHNRLSRGGFRRSHNIAYA CCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEC PVCAGCRSCIPIRIVSDRFRQSRTHRRIIAANAGLRAYEMPPRATAEQFKLFQRYQQARH HHHHHHHCCCEEEEHHHHHHHHHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHC GEGDMAGMSFYDYRAMVEDTPIETWLVEFRDGADELVGACLTDRLADGLSAVYSFFAPDL CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH TRQSLGTRSILWLVERTRELGLPYVYLGYWVPESPKMAYKARFRPAEILLGGTWTELTDS HHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHH LAAADDPPSWPLHLAPVQQCGP HHCCCCCCCCCEEECCHHHCCC >Mature Secondary Structure TVPGRPPQFFYATAPLPCPYVAGRTERKVVTELTGADADALHNRLSRGGFRRSHNIAYA CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEC PVCAGCRSCIPIRIVSDRFRQSRTHRRIIAANAGLRAYEMPPRATAEQFKLFQRYQQARH HHHHHHHCCCEEEEHHHHHHHHHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHC GEGDMAGMSFYDYRAMVEDTPIETWLVEFRDGADELVGACLTDRLADGLSAVYSFFAPDL CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCH TRQSLGTRSILWLVERTRELGLPYVYLGYWVPESPKMAYKARFRPAEILLGGTWTELTDS HHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHHHH LAAADDPPSWPLHLAPVQQCGP HHCCCCCCCCCEEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA