Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is yjeP [C]

Identifier: 148259255

GI number: 148259255

Start: 272229

End: 273335

Strand: Reverse

Name: yjeP [C]

Synonym: Acry_0235

Alternate gene names: 148259255

Gene position: 273335-272229 (Counterclockwise)

Preceding gene: 148259256

Following gene: 148259250

Centisome position: 8.06

GC content: 68.56

Gene sequence:

>1107_bases
ATGACCCGATCCGCGCCCGGCAACCCCATCGCGCACGCCGCCGGCAACCTTACAATCGTGCTGCACGGCTGGCCGCCTTT
GGTCACCACGGCAATCCTGGCCGCCGCCGCGATCCTGGTCGCGATCGTGTTCCACGCGATGCTGTTCCGGCTGCTCCCCC
GCCCGTTGCGCGACCGCGGCAGGGCCACGGGGGCGCTGGTCGCCCGCGTGCGGGCCATCGTGCTGGCCTTCCTGATCGTG
CTGATGCTGACCACGGTGGTGCCGCAGGCGCCGCTCGGACCGGGCCTGCGCTTCGGCGTGCTGCACGCGCTGAGCGCGGG
CCTCGTGATCCTGATCGGCTGGGCCGTGCTGCTCGCGATCGACATCTACACGACGCGCCAGCTTTCCCACCGTCCCGACA
ACATCCAGGCCGACGCCATCGCCCGCAAGCACGTGACTCAATGGCAGGTGCTGCGCCGGGCCAGCCATGTGCTGACCATC
ATCATCACCACGGCCGCCGCGCTGATGGTGTTTCCAGCGGTGCGGGATTACGGGGTGTCGCTGCTCGCCTCCGCCGGCGC
GGCCGGGCTCGTCGTCGGCCTCGCGGCGCGGCCGGTGCTCTCCAATCTCATCGCCGGCATCCAGATCGCCATCACCCAGC
CGCTGCGCGTCGAGGATGCGGTGGTGATCAACGGCCAGTGGGGCTGGGTGGAGGAAATTACCTCGACCTACGTGGTGGTG
CGGATCTGGAACTGGCAGCGCATGGTCGTCCCCCTGGCCTGGCTGCTCGAACAGCCGTTCCAGAACTGGACACGCGACTC
GTCAGAACTGATCGGCGAGGTGCACTGGAGCCTCGACTATACCGTGCCGATGGACGTGCTGCGCCGCAAGCTCGACGAGA
TCGTGCACGCGACGCCGCTCTGGAGCGGCAAGGTGGTGGTGCTGCAGGTCACCCACGCGCTGGAGACCACGCTGACACTG
CGCGCCCTGGTCTCGGCGCGCAATTCGGGCGAGGCCTGGGATCTGCGCTGCTTCGTGCGCGAGCAGATGATCACGTTCCT
GCAGAAGGAATATCCATACGCGCTGCCGCGCCGGCGCGTCGACCTCGAACGGACGGAAGTCGCCTGA

Upstream 100 bases:

>100_bases
CGAAGGTTGTATCGCCGGCACGGCGGTCTACCTCCTCACTGAGCCCGGCGGCCGCGATCCCTTGCGGGGGACGCGGCGCG
CCACCAGAGGAGGAGGCCGC

Downstream 100 bases:

>100_bases
CGCTTGTGCTCGGGCCTACGACGAAACGGACGGCAACGGGCCGGCGACGAGCACGAGGTCGTCGCGGTGGATCAGCTCAT
CCCGACCGCGCCAGCCGAGC

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel MscS; Mscs Mechanosensitive Ion Channel; Mechanosensitive Ion Channel; Small-Conductance Mechanosensitive Ion Channel; Mechanosensitive Ion Channel Domain-Containing Protein; Mechanosensitive Ion Channel Protein; MscS Mechanosensitive Ion Channel Protein; Transporter MscS Family; MscS Family Transporter; Small-Conductance Mechanosensitive Channel-Like Protein; Mechanosensitive Channel Protein

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIV
LMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTI
IITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV
RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTL
RALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA

Sequences:

>Translated_368_residues
MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIV
LMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTI
IITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV
RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTL
RALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA
>Mature_367_residues
TRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRGRATGALVARVRAIVLAFLIVL
MLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAIDIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTII
ITTAAALMVFPAVRDYGVSLLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVVR
IWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPLWSGKVVVLQVTHALETTLTLR
ALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRVDLERTEVA

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40632; Mature: 40501

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRG
CCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
RATGALVARVRAIVLAFLIVLMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTIIITTAAALMVFPAVRDYGVS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV
HHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCEEEECCCCCHHHHHHCCEEEE
RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPL
EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC
WSGKVVVLQVTHALETTLTLRALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRV
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DLERTEVA
CCHHHCCC
>Mature Secondary Structure 
TRSAPGNPIAHAAGNLTIVLHGWPPLVTTAILAAAAILVAIVFHAMLFRLLPRPLRDRG
CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
RATGALVARVRAIVLAFLIVLMLTTVVPQAPLGPGLRFGVLHALSAGLVILIGWAVLLAI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DIYTTRQLSHRPDNIQADAIARKHVTQWQVLRRASHVLTIIITTAAALMVFPAVRDYGVS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLASAGAAGLVVGLAARPVLSNLIAGIQIAITQPLRVEDAVVINGQWGWVEEITSTYVVV
HHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEECCEEEECCCCCHHHHHHCCEEEE
RIWNWQRMVVPLAWLLEQPFQNWTRDSSELIGEVHWSLDYTVPMDVLRRKLDEIVHATPL
EEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCC
WSGKVVVLQVTHALETTLTLRALVSARNSGEAWDLRCFVREQMITFLQKEYPYALPRRRV
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DLERTEVA
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA