| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is pyk [H]
Identifier: 148259198
GI number: 148259198
Start: 203141
End: 204565
Strand: Reverse
Name: pyk [H]
Synonym: Acry_0178
Alternate gene names: 148259198
Gene position: 204565-203141 (Counterclockwise)
Preceding gene: 148259201
Following gene: 148259197
Centisome position: 6.04
GC content: 70.25
Gene sequence:
>1425_bases ATGGCATCCAGGCTGCGGCGTCATCGGCGCACGAAAATCGTTGCAACCATCGGGCCGGCAAGTTCGACGCCGGAGATACT GTCGCAGCTCTTCGAGACCGGCGCCGACGTGTTCCGGCTCAATTTCAGCCACGGCACGCATGAGGATCACCTTGCGCGCC TGCAGATGATCCGCGCGCTGGAGCGGAAGTTCGACCGGCCGATCGGCATCCTCGCCGACGTGCAGGGGCCGAAGCTGCGC GTCGGCCAGTTTCGCGGCGGACGCGTGCAGTTGCAGACCGGCGCCGAATTCCAGCTCGACCTCAACCCCGCCCCCGGCGA TACCCGCCGCGTCAACCTGCCGCATCCCGAGATCATCGAGGCCGCCAGCATCGGCGCCACCCTGCTGCTCGATGACGGCA AGCTGCGCCTGCGGGTGCTGCGCAAGCGCGAGGACCACCTGCTGACCGAGGTCGTCACCGGCGGCCCGCTCTCCGACCGC AAGGGCGTCAACGTGCCCGACGTGGTGCTGCCGATCCCGGCGCTGACGAAGAAGGACCGCGCCGATCTCGCCTTCGCGCT CGAACACGGCATCGACTATATCGGCCTGTCCTTCGTCCAGCGCGCCGCCGACGTGCTGGAGGCGAAGGAGATCGCCGCCG GCCGCGCCCTGGTGATGACCAAGATGGAAAAGCCCCAGGCGCTCGACAATCTCGACGAGATCATGGACGCGACGGATGCC GTCATGGTCGCGCGCGGCGATCTCGGCGTCGAGCTGCCGCCCGAGGAAGTGCCGATCGTGCAGAAGCGCATCATCCGCGC CGCCCAGCAGCGCGGCCTGCCGGTGGTCGTCGCGACGCAGATGCTGGAGAGCATGATCTCCGCCCCCGCCCCCACCCGCG CCGAGGCATCGGACGTGGCGACCGCGGTGTTCGACGGCGCCGATGCGGTGATGCTCTCGGCCGAGAGTGCCGCCGGCCAG TATCCGCGCGAGGCGGTGAACATGATGGACCGCATCGTCGCCCGGGTGGAGCGGGACGATGACTGGCGGCGGACGATCGA CGCCAAGCGGCCGGACCCCGAACCTTCCTCGGCCGATGCCATCGCCCGTGCCGCCGAACAGGTCGCGCACACGATCGGCG CGCGCGCCATCGTCGCCTTCACCAGTTCCGGCGCCAGCGCGCTGCGCGTCGCCCGCGAGCGGCCGGACTGCCCCGTGATC GGCCTGACACCCAGTCTGGACACCGCCCGCCGCCTCGCGGCGGTCTGGGGCGTGCATGCCGTGGTCACGCAGGACGTGGG CTCGATGACCGAGGCTGTCGCCCTTTCGGCGAAGGTCGCGCGGCAGGAGGGCTTCGCCCAGCCGGGCGAAGAAATCGTCG TCGTCGCCGGCGTCCCCTTCGGCCAGAGCGGCACGACCAACGCGCTGCGCGTGGCCAGGGTGTAA
Upstream 100 bases:
>100_bases ATGTTTGCCATAGAGACGTTTATCACGACGCCGGTCACGGCGCGACACGATAACCCGGTCATCGGGACCTGGCAGGCGGA CAGATTCAGAGGGGACCAGC
Downstream 100 bases:
>100_bases CCCGCACGCCCCTTGCATTGCCGCCGTGCCCGGGCAAGACTGAAGCCTAGGGAGGACATCATATGATCGCGATTACCGTT CTGTATCCGAAGACCGCCAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MASRLRRHRRTKIVATIGPASSTPEILSQLFETGADVFRLNFSHGTHEDHLARLQMIRALERKFDRPIGILADVQGPKLR VGQFRGGRVQLQTGAEFQLDLNPAPGDTRRVNLPHPEIIEAASIGATLLLDDGKLRLRVLRKREDHLLTEVVTGGPLSDR KGVNVPDVVLPIPALTKKDRADLAFALEHGIDYIGLSFVQRAADVLEAKEIAAGRALVMTKMEKPQALDNLDEIMDATDA VMVARGDLGVELPPEEVPIVQKRIIRAAQQRGLPVVVATQMLESMISAPAPTRAEASDVATAVFDGADAVMLSAESAAGQ YPREAVNMMDRIVARVERDDDWRRTIDAKRPDPEPSSADAIARAAEQVAHTIGARAIVAFTSSGASALRVARERPDCPVI GLTPSLDTARRLAAVWGVHAVVTQDVGSMTEAVALSAKVARQEGFAQPGEEIVVVAGVPFGQSGTTNALRVARV
Sequences:
>Translated_474_residues MASRLRRHRRTKIVATIGPASSTPEILSQLFETGADVFRLNFSHGTHEDHLARLQMIRALERKFDRPIGILADVQGPKLR VGQFRGGRVQLQTGAEFQLDLNPAPGDTRRVNLPHPEIIEAASIGATLLLDDGKLRLRVLRKREDHLLTEVVTGGPLSDR KGVNVPDVVLPIPALTKKDRADLAFALEHGIDYIGLSFVQRAADVLEAKEIAAGRALVMTKMEKPQALDNLDEIMDATDA VMVARGDLGVELPPEEVPIVQKRIIRAAQQRGLPVVVATQMLESMISAPAPTRAEASDVATAVFDGADAVMLSAESAAGQ YPREAVNMMDRIVARVERDDDWRRTIDAKRPDPEPSSADAIARAAEQVAHTIGARAIVAFTSSGASALRVARERPDCPVI GLTPSLDTARRLAAVWGVHAVVTQDVGSMTEAVALSAKVARQEGFAQPGEEIVVVAGVPFGQSGTTNALRVARV >Mature_473_residues ASRLRRHRRTKIVATIGPASSTPEILSQLFETGADVFRLNFSHGTHEDHLARLQMIRALERKFDRPIGILADVQGPKLRV GQFRGGRVQLQTGAEFQLDLNPAPGDTRRVNLPHPEIIEAASIGATLLLDDGKLRLRVLRKREDHLLTEVVTGGPLSDRK GVNVPDVVLPIPALTKKDRADLAFALEHGIDYIGLSFVQRAADVLEAKEIAAGRALVMTKMEKPQALDNLDEIMDATDAV MVARGDLGVELPPEEVPIVQKRIIRAAQQRGLPVVVATQMLESMISAPAPTRAEASDVATAVFDGADAVMLSAESAAGQY PREAVNMMDRIVARVERDDDWRRTIDAKRPDPEPSSADAIARAAEQVAHTIGARAIVAFTSSGASALRVARERPDCPVIG LTPSLDTARRLAAVWGVHAVVTQDVGSMTEAVALSAKVARQEGFAQPGEEIVVVAGVPFGQSGTTNALRVARV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=492, Percent_Identity=37.8048780487805, Blast_Score=315, Evalue=8e-86, Organism=Homo sapiens, GI33286420, Length=492, Percent_Identity=37.8048780487805, Blast_Score=315, Evalue=8e-86, Organism=Homo sapiens, GI33286418, Length=496, Percent_Identity=37.7016129032258, Blast_Score=311, Evalue=8e-85, Organism=Homo sapiens, GI10835121, Length=491, Percent_Identity=37.2708757637475, Blast_Score=293, Evalue=4e-79, Organism=Homo sapiens, GI32967597, Length=491, Percent_Identity=37.2708757637475, Blast_Score=292, Evalue=6e-79, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=36.9337979094077, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=36.9337979094077, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=34.468085106383, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=34.468085106383, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=32.7102803738318, Blast_Score=131, Evalue=2e-30, Organism=Escherichia coli, GI1787965, Length=471, Percent_Identity=38.2165605095541, Blast_Score=319, Evalue=3e-88, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=39.9168399168399, Blast_Score=303, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17544584, Length=488, Percent_Identity=34.6311475409836, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=37.037037037037, Blast_Score=278, Evalue=6e-75, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=37.037037037037, Blast_Score=278, Evalue=7e-75, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=37.037037037037, Blast_Score=277, Evalue=9e-75, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=37.037037037037, Blast_Score=276, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6319279, Length=490, Percent_Identity=34.8979591836735, Blast_Score=266, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6324923, Length=488, Percent_Identity=34.4262295081967, Blast_Score=258, Evalue=2e-69, Organism=Drosophila melanogaster, GI24648964, Length=489, Percent_Identity=38.0368098159509, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI28571814, Length=489, Percent_Identity=38.0368098159509, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24581235, Length=492, Percent_Identity=33.5365853658537, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24648966, Length=415, Percent_Identity=35.9036144578313, Blast_Score=254, Evalue=6e-68, Organism=Drosophila melanogaster, GI24646914, Length=290, Percent_Identity=35.1724137931034, Blast_Score=161, Evalue=1e-39,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51042; Mature: 50911
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRLRRHRRTKIVATIGPASSTPEILSQLFETGADVFRLNFSHGTHEDHLARLQMIRAL CCHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH ERKFDRPIGILADVQGPKLRVGQFRGGRVQLQTGAEFQLDLNPAPGDTRRVNLPHPEIIE HHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCEEEEECCCCCCCCEEECCCCHHHHH AASIGATLLLDDGKLRLRVLRKREDHLLTEVVTGGPLSDRKGVNVPDVVLPIPALTKKDR HHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCH ADLAFALEHGIDYIGLSFVQRAADVLEAKEIAAGRALVMTKMEKPQALDNLDEIMDATDA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCHHCE VMVARGDLGVELPPEEVPIVQKRIIRAAQQRGLPVVVATQMLESMISAPAPTRAEASDVA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH TAVFDGADAVMLSAESAAGQYPREAVNMMDRIVARVERDDDWRRTIDAKRPDPEPSSADA HHHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHH IARAAEQVAHTIGARAIVAFTSSGASALRVARERPDCPVIGLTPSLDTARRLAAVWGVHA HHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHH VVTQDVGSMTEAVALSAKVARQEGFAQPGEEIVVVAGVPFGQSGTTNALRVARV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECC >Mature Secondary Structure ASRLRRHRRTKIVATIGPASSTPEILSQLFETGADVFRLNFSHGTHEDHLARLQMIRAL CHHHHHHHHCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH ERKFDRPIGILADVQGPKLRVGQFRGGRVQLQTGAEFQLDLNPAPGDTRRVNLPHPEIIE HHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCEEEEECCCCCCCCEEECCCCHHHHH AASIGATLLLDDGKLRLRVLRKREDHLLTEVVTGGPLSDRKGVNVPDVVLPIPALTKKDR HHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCH ADLAFALEHGIDYIGLSFVQRAADVLEAKEIAAGRALVMTKMEKPQALDNLDEIMDATDA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCHHCE VMVARGDLGVELPPEEVPIVQKRIIRAAQQRGLPVVVATQMLESMISAPAPTRAEASDVA EEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH TAVFDGADAVMLSAESAAGQYPREAVNMMDRIVARVERDDDWRRTIDAKRPDPEPSSADA HHHHCCCCEEEEECCHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHH IARAAEQVAHTIGARAIVAFTSSGASALRVARERPDCPVIGLTPSLDTARRLAAVWGVHA HHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHH VVTQDVGSMTEAVALSAKVARQEGFAQPGEEIVVVAGVPFGQSGTTNALRVARV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA