| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259134
Identifier: 148259134
GI number: 148259134
Start: 124372
End: 125823
Strand: Reverse
Name: 148259134
Synonym: Acry_0114
Alternate gene names: NA
Gene position: 125823-124372 (Counterclockwise)
Preceding gene: 148259135
Following gene: 148259131
Centisome position: 3.71
GC content: 55.79
Gene sequence:
>1452_bases ATGCGAAACATTAGCAACCAGGCGGGCGACGTCCCGGCCCGGTCTGCGACGCGGAAGCTGCGCCGCGCAGCATGCGCCGC AGGCGTGATCAGCCTTTTCGGCCTCGCACCGCTCGCGCACGCGCAGAGCCTGGGCGACGCACTGCGGCAGACCACCTTCC AGGGCATGATCGGGGCGATTCACTTCGATTATGCAAATAATGGTCACACTTCGAAGAGCACTCACTCCTTCGCGATCGGC GGGCATCTGATTGCCCACACCGGATCGTTCAACGGGTTCAGTGTTGGCCTTGGCGGTTACACGGCGCAGTCGCTCGGCCT CTACAGCAAGAACGACACACACTACGACAGCGAACTGACCGGTTCGTATTTTGGCATCCAGTCGTTCCGGCAGGCTTATC TGCAGTATCAGACGCCGAAAGTGGAAATCCGTTTCGGCCGTCAGCTGATCCAGACGCCCTACGCCAATCAGGACTACTAC ACGTTCAACCCGCGCGCCTTCATGGGCGTTGCCGGTGTTGTGAACGTGCTTGGCAATGGCTCCGACAAGGTCGATGCGGG CGCGCTGAGTCTCGAAGATAATCCCGCTGCGTTCAGCGTCTTCATGACCCGGATGTTTGATTACGAAAGCCGCTACAGCA GCTCATTTACTGCAGCCAACCGCTACTCCGGCACGAAGCCGACCAACGGCTTTATCGCCATCGGCGCCCGGTATCACGGC GACGTCGGCTCTATGCAGTTGACCGCGCAGGCCTGGTATTATGATTTCTATCAGTACGCGCAGATGGTTTATGGCCAACT CGACGTAGTGCAACCCTTGAGCAATGGCCAGGCCATCTTCGGCGCAGTCCAGGCCCTGACGGAAGGCAATTCCGCTGGAA ATTCTAACAATATCGCCGCTCTGACGAATAATAATGTTGGTAGCGTCAATGCACATGTCTATGGTGCAAAATTAGGATAT TCCTTCGGCGATGGTAGCATTGCGCTGGTTGGCGACTACGCGCCGACCGAGTACAATTCGTTCCACCATGGCGGTGTTGT GCACCCGTACAACGATAATACCGGCACTTCCTTTACAGATACCATGCAAACCGGCATCGCGAATCTGGGGCCAGGCTATG CATATGGTGTGACGACGAGCTACGCTTTCCTCAACAAGAAGCTGAAGGTTGACGTCTCGTACATTCGCTACCTTGCACGC TATGGGTTCGGCGGCGACTCCAGAAACTATACGTATGGTGGCGCTTACGGTTTCTCGAGCACGAACTATATTCCGAACCA GCAACTTTGGGCACTTGATGCTAGCGCATCGTATGATCTCTCATCGGTGCTGAAAGGGCTCTCGGTCGCCGAGGATACCG ATATAGCGCAAGCAGAAAACCGGGCTGGCTACACGCAATACAATCATAATCCCTATTTCAGCAGCCGCTTCTATCTCGAA TATAACTTCTGA
Upstream 100 bases:
>100_bases CCGTCTACCCGTTGCAGATGGCGAAGCAGCGGGCAGGATCTGCGCGCAAGGCGCGGATTTCGCCAGCAAAAAAGTCTTTC AACATGGAGGTTCAACCATA
Downstream 100 bases:
>100_bases GACAGTCGGCCACTAAAAATGCGCGCCCTGGCATCGTTCCCGGGCGCGCTTCTTTTTGTGCGTCGATCCTCAGCCGTAAG CGCCGGCCGACCGTTACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MRNISNQAGDVPARSATRKLRRAACAAGVISLFGLAPLAHAQSLGDALRQTTFQGMIGAIHFDYANNGHTSKSTHSFAIG GHLIAHTGSFNGFSVGLGGYTAQSLGLYSKNDTHYDSELTGSYFGIQSFRQAYLQYQTPKVEIRFGRQLIQTPYANQDYY TFNPRAFMGVAGVVNVLGNGSDKVDAGALSLEDNPAAFSVFMTRMFDYESRYSSSFTAANRYSGTKPTNGFIAIGARYHG DVGSMQLTAQAWYYDFYQYAQMVYGQLDVVQPLSNGQAIFGAVQALTEGNSAGNSNNIAALTNNNVGSVNAHVYGAKLGY SFGDGSIALVGDYAPTEYNSFHHGGVVHPYNDNTGTSFTDTMQTGIANLGPGYAYGVTTSYAFLNKKLKVDVSYIRYLAR YGFGGDSRNYTYGGAYGFSSTNYIPNQQLWALDASASYDLSSVLKGLSVAEDTDIAQAENRAGYTQYNHNPYFSSRFYLE YNF
Sequences:
>Translated_483_residues MRNISNQAGDVPARSATRKLRRAACAAGVISLFGLAPLAHAQSLGDALRQTTFQGMIGAIHFDYANNGHTSKSTHSFAIG GHLIAHTGSFNGFSVGLGGYTAQSLGLYSKNDTHYDSELTGSYFGIQSFRQAYLQYQTPKVEIRFGRQLIQTPYANQDYY TFNPRAFMGVAGVVNVLGNGSDKVDAGALSLEDNPAAFSVFMTRMFDYESRYSSSFTAANRYSGTKPTNGFIAIGARYHG DVGSMQLTAQAWYYDFYQYAQMVYGQLDVVQPLSNGQAIFGAVQALTEGNSAGNSNNIAALTNNNVGSVNAHVYGAKLGY SFGDGSIALVGDYAPTEYNSFHHGGVVHPYNDNTGTSFTDTMQTGIANLGPGYAYGVTTSYAFLNKKLKVDVSYIRYLAR YGFGGDSRNYTYGGAYGFSSTNYIPNQQLWALDASASYDLSSVLKGLSVAEDTDIAQAENRAGYTQYNHNPYFSSRFYLE YNF >Mature_483_residues MRNISNQAGDVPARSATRKLRRAACAAGVISLFGLAPLAHAQSLGDALRQTTFQGMIGAIHFDYANNGHTSKSTHSFAIG GHLIAHTGSFNGFSVGLGGYTAQSLGLYSKNDTHYDSELTGSYFGIQSFRQAYLQYQTPKVEIRFGRQLIQTPYANQDYY TFNPRAFMGVAGVVNVLGNGSDKVDAGALSLEDNPAAFSVFMTRMFDYESRYSSSFTAANRYSGTKPTNGFIAIGARYHG DVGSMQLTAQAWYYDFYQYAQMVYGQLDVVQPLSNGQAIFGAVQALTEGNSAGNSNNIAALTNNNVGSVNAHVYGAKLGY SFGDGSIALVGDYAPTEYNSFHHGGVVHPYNDNTGTSFTDTMQTGIANLGPGYAYGVTTSYAFLNKKLKVDVSYIRYLAR YGFGGDSRNYTYGGAYGFSSTNYIPNQQLWALDASASYDLSSVLKGLSVAEDTDIAQAENRAGYTQYNHNPYFSSRFYLE YNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52434; Mature: 52434
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNISNQAGDVPARSATRKLRRAACAAGVISLFGLAPLAHAQSLGDALRQTTFQGMIGAI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE HFDYANNGHTSKSTHSFAIGGHLIAHTGSFNGFSVGLGGYTAQSLGLYSKNDTHYDSELT EEECCCCCCCCCCCCEEEECCEEEEECCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCC GSYFGIQSFRQAYLQYQTPKVEIRFGRQLIQTPYANQDYYTFNPRAFMGVAGVVNVLGNG CCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCC SDKVDAGALSLEDNPAAFSVFMTRMFDYESRYSSSFTAANRYSGTKPTNGFIAIGARYHG CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEECC DVGSMQLTAQAWYYDFYQYAQMVYGQLDVVQPLSNGQAIFGAVQALTEGNSAGNSNNIAA CCCCEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEE LTNNNVGSVNAHVYGAKLGYSFGDGSIALVGDYAPTEYNSFHHGGVVHPYNDNTGTSFTD EECCCCCEEEEEEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCHH TMQTGIANLGPGYAYGVTTSYAFLNKKLKVDVSYIRYLARYGFGGDSRNYTYGGAYGFSS HHHHHHHHCCCCEEEHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCEEECCCCCCCC TNYIPNQQLWALDASASYDLSSVLKGLSVAEDTDIAQAENRAGYTQYNHNPYFSSRFYLE CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEE YNF ECC >Mature Secondary Structure MRNISNQAGDVPARSATRKLRRAACAAGVISLFGLAPLAHAQSLGDALRQTTFQGMIGAI CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE HFDYANNGHTSKSTHSFAIGGHLIAHTGSFNGFSVGLGGYTAQSLGLYSKNDTHYDSELT EEECCCCCCCCCCCCEEEECCEEEEECCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCC GSYFGIQSFRQAYLQYQTPKVEIRFGRQLIQTPYANQDYYTFNPRAFMGVAGVVNVLGNG CCHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCC SDKVDAGALSLEDNPAAFSVFMTRMFDYESRYSSSFTAANRYSGTKPTNGFIAIGARYHG CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCEEEEEEEECC DVGSMQLTAQAWYYDFYQYAQMVYGQLDVVQPLSNGQAIFGAVQALTEGNSAGNSNNIAA CCCCEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEE LTNNNVGSVNAHVYGAKLGYSFGDGSIALVGDYAPTEYNSFHHGGVVHPYNDNTGTSFTD EECCCCCEEEEEEEEEEECCEECCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCHH TMQTGIANLGPGYAYGVTTSYAFLNKKLKVDVSYIRYLARYGFGGDSRNYTYGGAYGFSS HHHHHHHHCCCCEEEHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCCEEECCCCCCCC TNYIPNQQLWALDASASYDLSSVLKGLSVAEDTDIAQAENRAGYTQYNHNPYFSSRFYLE CCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEE YNF ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA