| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148259118
Identifier: 148259118
GI number: 148259118
Start: 107462
End: 108439
Strand: Reverse
Name: 148259118
Synonym: Acry_0097
Alternate gene names: NA
Gene position: 108439-107462 (Counterclockwise)
Preceding gene: 148259122
Following gene: 148259117
Centisome position: 3.2
GC content: 64.42
Gene sequence:
>978_bases ATGCCCGCCACGGTTGAAACGACCCCATGCCTCCCCGGTCTGTCACCTGTCGCCGGCAAACCGGTGCTGGCCCGCTTCGA CGGCGAGATGCTGTCCTCAGACGGCGGTCTGCTGGCATTACGCGAGGTCGAGAAGCGGCTGGGGATTGCCGCGCAGTTGG CAGCCTGCATCGATGATCCGCGCACGCCGGAGGGCGTCCAGCATGGGCTCGACGAGATCATTCGGTTTCGCATGTTGATG ATCGCGGCCGGTTACGAGGATGGCAACGACGCCGACCGGTTGCGCAACGACCCGATGTTCAAACTCGCGATGGAGCGTCT GCCCGAGGCGGGCGATCTGTGCTCGCAAGCGACGGTTTCACGCACCGAGAATTTGCCCGGGCCTCGCGCGCTGCTGCGCA TGGGCCTGGCGATGGTCGAGCATTATTGCGCGAGCTTCCGCACCATACCCAACCGGATTGTGCTGGATATCGACGATACC TTCGATGCCGCTCACGGCGCGCAGCAACTCTGCTTGTTCAACGCACACCACAACGAATACGGATCTCAACCGATTGTGGT GTTCGACGGCGACGGCCGGATGCTCGCCGCGGTGCTGCGTCCGGCGTGTCGGCCAAAAGGGGCCCAGATCGTCAAATGGT TGCGCCGGCTGATCGACGCCATCCGCGGCCATTGGCCACGTACCGCGATCATGCTGCGCGGTGATTCGCACTTCTGCACG CCGGCAGTTCTGCGGTTCTGTCGAGCGCGTCGCCTCGATTACATCTTCGGCGTCGCACGACCACGACGCTGCGCAAACAC GTCATCGCGCTGGAGGCCAGCACCACGGCGCGCGCGCAACAGGCTCCGGGAGAGAAAATCCGGCGGTTCAAAGAGTTCAA TGATGGCGCAGCAAGCTGGGACCGCGTCGAGCGGATCATCGCCCGCGTCGAGGCCTGGCCGCTGGGGGGCGATACCCGCT TCATCGTCACCAGCCTGA
Upstream 100 bases:
>100_bases TAGCCTGAATTATGCGTGAGGGTTGGCAGGCATAGCGTAAACCGTTGATTTGATCTAAGAATTTGGTGTCGAGACCAAAT CTTCATCAGCATGGAACGTG
Downstream 100 bases:
>100_bases AGGCTGGTTCCCCGCGCACCCTGTATCAAGAGATCTACTGCGCGCGCGGCCAGGCCGAGAACCATATCAAAGGCGTGGAA GACCCATCTTGCGGCCGACC
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISSpo2 Transposase; Transposase Family Protein; Transposase Is4 Family Protein; Transposase Is4-Like Protein; Transposase For Insertion Sequence NGRIS-20g
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPATVETTPCLPGLSPVAGKPVLARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDPRTPEGVQHGLDEIIRFRMLM IAAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATVSRTENLPGPRALLRMGLAMVEHYCASFRTIPNRIVLDIDDT FDAAHGAQQLCLFNAHHNEYGSQPIVVFDGDGRMLAAVLRPACRPKGAQIVKWLRRLIDAIRGHWPRTAIMLRGDSHFCT PAVLRFCRARRLDYIFGVARPRRCANTSSRWRPAPRRARNRLRERKSGGSKSSMMAQQAGTASSGSSPASRPGRWGAIPA SSSPA
Sequences:
>Translated_325_residues MPATVETTPCLPGLSPVAGKPVLARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDPRTPEGVQHGLDEIIRFRMLM IAAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATVSRTENLPGPRALLRMGLAMVEHYCASFRTIPNRIVLDIDDT FDAAHGAQQLCLFNAHHNEYGSQPIVVFDGDGRMLAAVLRPACRPKGAQIVKWLRRLIDAIRGHWPRTAIMLRGDSHFCT PAVLRFCRARRLDYIFGVARPRRCANTSSRWRPAPRRARNRLRERKSGGSKSSMMAQQAGTASSGSSPASRPGRWGAIPA SSSPA >Mature_324_residues PATVETTPCLPGLSPVAGKPVLARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDPRTPEGVQHGLDEIIRFRMLMI AAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATVSRTENLPGPRALLRMGLAMVEHYCASFRTIPNRIVLDIDDTF DAAHGAQQLCLFNAHHNEYGSQPIVVFDGDGRMLAAVLRPACRPKGAQIVKWLRRLIDAIRGHWPRTAIMLRGDSHFCTP AVLRFCRARRLDYIFGVARPRRCANTSSRWRPAPRRARNRLRERKSGGSKSSMMAQQAGTASSGSSPASRPGRWGAIPAS SSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35593; Mature: 35462
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATVETTPCLPGLSPVAGKPVLARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDP CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC RTPEGVQHGLDEIIRFRMLMIAAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATVS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH RTENLPGPRALLRMGLAMVEHYCASFRTIPNRIVLDIDDTFDAAHGAQQLCLFNAHHNEY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCHHHHHEEECHHHHC GSQPIVVFDGDGRMLAAVLRPACRPKGAQIVKWLRRLIDAIRGHWPRTAIMLRGDSHFCT CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC PAVLRFCRARRLDYIFGVARPRRCANTSSRWRPAPRRARNRLRERKSGGSKSSMMAQQAG HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC TASSGSSPASRPGRWGAIPASSSPA CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PATVETTPCLPGLSPVAGKPVLARFDGEMLSSDGGLLALREVEKRLGIAAQLAACIDDP CCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCC RTPEGVQHGLDEIIRFRMLMIAAGYEDGNDADRLRNDPMFKLAMERLPEAGDLCSQATVS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH RTENLPGPRALLRMGLAMVEHYCASFRTIPNRIVLDIDDTFDAAHGAQQLCLFNAHHNEY HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCHHHHHEEECHHHHC GSQPIVVFDGDGRMLAAVLRPACRPKGAQIVKWLRRLIDAIRGHWPRTAIMLRGDSHFCT CCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC PAVLRFCRARRLDYIFGVARPRRCANTSSRWRPAPRRARNRLRERKSGGSKSSMMAQQAG HHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC TASSGSSPASRPGRWGAIPASSSPA CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA