Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148243301

Identifier: 148243301

GI number: 148243301

Start: 1910403

End: 1910735

Strand: Direct

Name: 148243301

Synonym: SynRCC307_2202

Alternate gene names: NA

Gene position: 1910403-1910735 (Clockwise)

Preceding gene: 148243299

Following gene: 148243302

Centisome position: 85.86

GC content: 63.96

Gene sequence:

>333_bases
ATGCAAGCGACGCGACTCAACCGGCTCAGCGGTCAACTGCTCAGCCGCCTGAGCCAATGGGCCGAGAACCCATGGCGCCG
CTTCTCGCTGCTGGTGCTGGTGCTGTTGGCCGGCTTCAGTGCCGGGGTCAGCATCGGCTCGGTCGCCGGTGTGCTGATGG
TGATCGACCCAGTGGGAGCCCTGGTGGTGGTGGCCGCCTCAGAACTCGCCATCAAGGCAAGACGGCCCCTGCTCAAGCGC
GGCGGCGACAAACTGCCGCTGGGCCTGTTGGACATGGCCCGCATGGGAATCGTTTATGGCCTGCTGCTCGAAGGCATCAA
ATCGAGCATTTAA

Upstream 100 bases:

>100_bases
CATGGGTCACGTTCGAGGTGGCGCTGAGCTTCGCTGATTTCCGCTCACCAGAGGAAAACAGCAGGACAGCGCGCAAACCG
AATCCCACGCGACTCAAGCG

Downstream 100 bases:

>100_bases
TCCCTGCTTCGCGGCCAATTTTGAACGGCGTTCATACCTTGTGGAAGTTGATCGCTACAAGGGCCAATGACTGCCACCCG
TGAGCGTTTCTTTCTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MQATRLNRLSGQLLSRLSQWAENPWRRFSLLVLVLLAGFSAGVSIGSVAGVLMVIDPVGALVVVAASELAIKARRPLLKR
GGDKLPLGLLDMARMGIVYGLLLEGIKSSI

Sequences:

>Translated_110_residues
MQATRLNRLSGQLLSRLSQWAENPWRRFSLLVLVLLAGFSAGVSIGSVAGVLMVIDPVGALVVVAASELAIKARRPLLKR
GGDKLPLGLLDMARMGIVYGLLLEGIKSSI
>Mature_110_residues
MQATRLNRLSGQLLSRLSQWAENPWRRFSLLVLVLLAGFSAGVSIGSVAGVLMVIDPVGALVVVAASELAIKARRPLLKR
GGDKLPLGLLDMARMGIVYGLLLEGIKSSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11722; Mature: 11722

Theoretical pI: Translated: 11.77; Mature: 11.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATRLNRLSGQLLSRLSQWAENPWRRFSLLVLVLLAGFSAGVSIGSVAGVLMVIDPVGA
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LVVVAASELAIKARRPLLKRGGDKLPLGLLDMARMGIVYGLLLEGIKSSI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQATRLNRLSGQLLSRLSQWAENPWRRFSLLVLVLLAGFSAGVSIGSVAGVLMVIDPVGA
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LVVVAASELAIKARRPLLKRGGDKLPLGLLDMARMGIVYGLLLEGIKSSI
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA