| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is wzb [C]
Identifier: 148243167
GI number: 148243167
Start: 1788204
End: 1788677
Strand: Direct
Name: wzb [C]
Synonym: SynRCC307_2068
Alternate gene names: 148243167
Gene position: 1788204-1788677 (Clockwise)
Preceding gene: 148243166
Following gene: 148243170
Centisome position: 80.37
GC content: 63.29
Gene sequence:
>474_bases ATGAGCTCCCAACCCACCCGCGTTCTGTTTGTTTGCCTCGGCAACATCTGCCGCTCACCGGCTGCCGAGGGGGTGTTTCT CGATTTGCTTGAGCGTGAAAACCTCAACGATGCCTTTGAGGTGGATTCCGCTGGCACCGGGAACTGGCATGTGGGCAAAC GCGCCGACCCGCGCATGCGCGCTGCGGCCGAACGCCGCGGCATCGACCTGCCGAGCCGCGCCCGTCAAATCGAGCCCGAG GACCTCAGCCGCTTTGATTGGATCATCACCATGGATGACAGCAATCTGGCCAACGTGCGGGCCCTTGATCCCAGTGGCAG CAGCCACGACCGCATCGTGCCGCTCACCAGCCACTGCAGCCGCCACCAGGCCAGCGAAGTGCCCGACCCCTACTACGGCG GCGAGCAGGGGTTTGAGCATGTTCTCGATTTGCTCGAAGATGCCTGCAGCGGACTGCTCAAGCGTCTGCGTTGA
Upstream 100 bases:
>100_bases CCCAGGCACGTGCCCTACTGCGGCAGAGGAGCCAACAGGAGATGGACGATACGCTCGTCGTTCGTTTGCGCGCGCTTCTC GCCCTCGAGCGCCTGGCTGC
Downstream 100 bases:
>100_bases GTGCCTCCACGGGCACCCACTCGCGGAATAGGGCAACGATCTGAGCCACCACCTCATCGATGCTGAGGCCATCACTAAGC AACTCAACTGCGTCACTGGC
Product: low molecular weight protein-tyrosine-phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSSQPTRVLFVCLGNICRSPAAEGVFLDLLERENLNDAFEVDSAGTGNWHVGKRADPRMRAAAERRGIDLPSRARQIEPE DLSRFDWIITMDDSNLANVRALDPSGSSHDRIVPLTSHCSRHQASEVPDPYYGGEQGFEHVLDLLEDACSGLLKRLR
Sequences:
>Translated_157_residues MSSQPTRVLFVCLGNICRSPAAEGVFLDLLERENLNDAFEVDSAGTGNWHVGKRADPRMRAAAERRGIDLPSRARQIEPE DLSRFDWIITMDDSNLANVRALDPSGSSHDRIVPLTSHCSRHQASEVPDPYYGGEQGFEHVLDLLEDACSGLLKRLR >Mature_156_residues SSQPTRVLFVCLGNICRSPAAEGVFLDLLERENLNDAFEVDSAGTGNWHVGKRADPRMRAAAERRGIDLPSRARQIEPED LSRFDWIITMDDSNLANVRALDPSGSSHDRIVPLTSHCSRHQASEVPDPYYGGEQGFEHVLDLLEDACSGLLKRLR
Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI6005988, Length=157, Percent_Identity=38.8535031847134, Blast_Score=114, Evalue=2e-26, Organism=Homo sapiens, GI4757714, Length=157, Percent_Identity=39.4904458598726, Blast_Score=112, Evalue=1e-25, Organism=Homo sapiens, GI96304457, Length=83, Percent_Identity=45.7831325301205, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788375, Length=140, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6325330, Length=152, Percent_Identity=34.2105263157895, Blast_Score=104, Evalue=7e-24, Organism=Drosophila melanogaster, GI78706766, Length=149, Percent_Identity=42.2818791946309, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI78706768, Length=149, Percent_Identity=42.2818791946309, Blast_Score=123, Evalue=6e-29, Organism=Drosophila melanogaster, GI78706764, Length=126, Percent_Identity=44.4444444444444, Blast_Score=114, Evalue=3e-26, Organism=Drosophila melanogaster, GI78706770, Length=156, Percent_Identity=39.1025641025641, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706772, Length=156, Percent_Identity=39.1025641025641, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI78711846, Length=156, Percent_Identity=33.974358974359, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI24648069, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000106 - InterPro: IPR017867 [H]
Pfam domain/function: PF01451 LMWPc [H]
EC number: =3.1.3.48 [H]
Molecular weight: Translated: 17473; Mature: 17342
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQPTRVLFVCLGNICRSPAAEGVFLDLLERENLNDAFEVDSAGTGNWHVGKRADPRMR CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHH AAAERRGIDLPSRARQIEPEDLSRFDWIITMDDSNLANVRALDPSGSSHDRIVPLTSHCS HHHHHCCCCCCHHHCCCCHHHHCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHHH RHQASEVPDPYYGGEQGFEHVLDLLEDACSGLLKRLR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSQPTRVLFVCLGNICRSPAAEGVFLDLLERENLNDAFEVDSAGTGNWHVGKRADPRMR CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHH AAAERRGIDLPSRARQIEPEDLSRFDWIITMDDSNLANVRALDPSGSSHDRIVPLTSHCS HHHHHCCCCCCHHHCCCCHHHHCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHHH RHQASEVPDPYYGGEQGFEHVLDLLEDACSGLLKRLR HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]