Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242948

Identifier: 148242948

GI number: 148242948

Start: 1610922

End: 1611695

Strand: Direct

Name: 148242948

Synonym: SynRCC307_1849

Alternate gene names: NA

Gene position: 1610922-1611695 (Clockwise)

Preceding gene: 148242947

Following gene: 148242952

Centisome position: 72.4

GC content: 61.24

Gene sequence:

>774_bases
ATGCGGGGTAACGAGATGACGGCAGCCGGGTCAACATCACCGCTGCCGATTGGCGGCTCGATTAGCCGCGGCTGGCAAGC
CTTTACCCGCGCCCCCTGGGTATTTGTGGGTTTCACCCTGCTGGGGTTGGTGCTCACCTTTTTCACCCAGTGGCTGCAAG
ACGTGGGCAGCAATGGCGGCGATAGCGAAGGCTTTGGTGCCATCGGCTGGGGCCTGGTGGTGGTGATCGGGCTGGTGCTC
AATGTGCTGGTCAGCCTGTGGATGAATATCGGCCTGTTCCGCGGCGCCTGGATTGCGCTGTCGGGCCGCAAACCCAGCTG
GGACGATTTCTTCCGCTGGGATGGAAACGCCATGGGGCGTCTGTTCTTGATGGCCCTGCTGCTACTCGGCGTCAACATCT
TGATCTTGATCATCGCGGGGCTCTCAGGAGCGCTGCTCAGCCTGATCCGCTTCGAACTCAGCGCCTTGCCCTTGCTGGCT
GGTTTGCTGGTGATGATCTATGTGGGCGTCACGCAGATGTTCCACTTGCCCCTGGTGATTGCCCGCGGTGATAGCCCAGT
GCCAGCGTTCAAAGCGGGGCGCCAGGGCGTGGACCCTCAGTTTTTCGGCGTGCTGGGTTTTGGGGCCTTGATGATCCTGA
TTGTGTTGCTGGGCGTGCTGATCTTTGGCGTGGGCTTGCTGGTGGCAGCTCCGGTTGTGATTTGCAGCCTGGTGGCGGCT
TACCAACACCTCTTCGGCAGCGACGACCGCACCGGCTTTTTGCAGGCCAACTAG

Upstream 100 bases:

>100_bases
CGGCGCCAGCGCCGCGCGACTGCTTGCGCTGCTCGGGCCAGCCACGCCCTAAGCATCCCTTCATGGCAGCAGCCGCTGAG
CAGAGCTAATTTCCGCCCAA

Downstream 100 bases:

>100_bases
AAACTACCGGCTTTCGCCAGTGCCAAGCACAGTTCCCCACTGGCCGGAGGCTGCCACATCCCCTCCGCGCCACGGCCATT
GGGAGAGCTCAACACGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL
NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA
GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA
YQHLFGSDDRTGFLQAN

Sequences:

>Translated_257_residues
MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL
NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA
GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA
YQHLFGSDDRTGFLQAN
>Mature_257_residues
MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL
NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA
GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA
YQHLFGSDDRTGFLQAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27364; Mature: 27364

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DSEGFGAIGWGLVVVIGLVLNVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCHHHH
LFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLAGLLVMIYVGVTQMFHLPLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
ARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA
ECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQHLFGSDDRTGFLQAN
HHHHHCCCCCCEECCCC
>Mature Secondary Structure
MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DSEGFGAIGWGLVVVIGLVLNVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCHHHH
LFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLAGLLVMIYVGVTQMFHLPLVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
ARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA
ECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQHLFGSDDRTGFLQAN
HHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA