| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242948
Identifier: 148242948
GI number: 148242948
Start: 1610922
End: 1611695
Strand: Direct
Name: 148242948
Synonym: SynRCC307_1849
Alternate gene names: NA
Gene position: 1610922-1611695 (Clockwise)
Preceding gene: 148242947
Following gene: 148242952
Centisome position: 72.4
GC content: 61.24
Gene sequence:
>774_bases ATGCGGGGTAACGAGATGACGGCAGCCGGGTCAACATCACCGCTGCCGATTGGCGGCTCGATTAGCCGCGGCTGGCAAGC CTTTACCCGCGCCCCCTGGGTATTTGTGGGTTTCACCCTGCTGGGGTTGGTGCTCACCTTTTTCACCCAGTGGCTGCAAG ACGTGGGCAGCAATGGCGGCGATAGCGAAGGCTTTGGTGCCATCGGCTGGGGCCTGGTGGTGGTGATCGGGCTGGTGCTC AATGTGCTGGTCAGCCTGTGGATGAATATCGGCCTGTTCCGCGGCGCCTGGATTGCGCTGTCGGGCCGCAAACCCAGCTG GGACGATTTCTTCCGCTGGGATGGAAACGCCATGGGGCGTCTGTTCTTGATGGCCCTGCTGCTACTCGGCGTCAACATCT TGATCTTGATCATCGCGGGGCTCTCAGGAGCGCTGCTCAGCCTGATCCGCTTCGAACTCAGCGCCTTGCCCTTGCTGGCT GGTTTGCTGGTGATGATCTATGTGGGCGTCACGCAGATGTTCCACTTGCCCCTGGTGATTGCCCGCGGTGATAGCCCAGT GCCAGCGTTCAAAGCGGGGCGCCAGGGCGTGGACCCTCAGTTTTTCGGCGTGCTGGGTTTTGGGGCCTTGATGATCCTGA TTGTGTTGCTGGGCGTGCTGATCTTTGGCGTGGGCTTGCTGGTGGCAGCTCCGGTTGTGATTTGCAGCCTGGTGGCGGCT TACCAACACCTCTTCGGCAGCGACGACCGCACCGGCTTTTTGCAGGCCAACTAG
Upstream 100 bases:
>100_bases CGGCGCCAGCGCCGCGCGACTGCTTGCGCTGCTCGGGCCAGCCACGCCCTAAGCATCCCTTCATGGCAGCAGCCGCTGAG CAGAGCTAATTTCCGCCCAA
Downstream 100 bases:
>100_bases AAACTACCGGCTTTCGCCAGTGCCAAGCACAGTTCCCCACTGGCCGGAGGCTGCCACATCCCCTCCGCGCCACGGCCATT GGGAGAGCTCAACACGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA YQHLFGSDDRTGFLQAN
Sequences:
>Translated_257_residues MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA YQHLFGSDDRTGFLQAN >Mature_257_residues MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGGDSEGFGAIGWGLVVVIGLVL NVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGRLFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLA GLLVMIYVGVTQMFHLPLVIARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA YQHLFGSDDRTGFLQAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27364; Mature: 27364
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DSEGFGAIGWGLVVVIGLVLNVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCHHHH LFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLAGLLVMIYVGVTQMFHLPLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE ARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA ECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQHLFGSDDRTGFLQAN HHHHHCCCCCCEECCCC >Mature Secondary Structure MRGNEMTAAGSTSPLPIGGSISRGWQAFTRAPWVFVGFTLLGLVLTFFTQWLQDVGSNGG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DSEGFGAIGWGLVVVIGLVLNVLVSLWMNIGLFRGAWIALSGRKPSWDDFFRWDGNAMGR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCHHHH LFLMALLLLGVNILILIIAGLSGALLSLIRFELSALPLLAGLLVMIYVGVTQMFHLPLVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE ARGDSPVPAFKAGRQGVDPQFFGVLGFGALMILIVLLGVLIFGVGLLVAAPVVICSLVAA ECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQHLFGSDDRTGFLQAN HHHHHCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA