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The map label for this gene is 148242945

Identifier: 148242945

GI number: 148242945

Start: 1608073

End: 1608858

Strand: Direct

Name: 148242945

Synonym: SynRCC307_1846

Alternate gene names: NA

Gene position: 1608073-1608858 (Clockwise)

Preceding gene: 148242944

Following gene: 148242946

Centisome position: 72.28

GC content: 65.52

Gene sequence:

>786_bases
ATGATGCCGCGCCGCGACCTGCTCGAGGGGGCCCGCGATCCCCAAGCACTCGAAGCCCTCATTCAGCAAGCCGAAGTGGT
GCTGCGCACCTATCAGCCCAGCTGGAGCGCCTTCCTCACAGGTCCCCAGCGCGAGGAGGCTGAAGAGCGCTTCGCCCCTT
TAGGCGAGCTGCACCTGCGCAGTGCCGGTGGCTTTCCTCAAGCTGAGCGGCGCCTGCTGCAGATCAGCCGCAGCGATCAA
GCGGCTGATGCCGGCGAGCCAGCGCCGCTGGCGCTGGTCGAGGTGAGCGGCAATTTCCTTTTTGACCCCGCTGAGCCAAC
GGCGATCCGGGCGGCCTTGATCGACCAGCACAGCATCGATCCGCTCCACCTTGGCGATGTGTTGGTGCGCGGTGATCGCG
GCGCTCTGGTGATCGTCACCAGCGCCATGGCTGAACGCCTGCAGGAGCAATCCCTTCAGGTGCGCAGCGTGGACTGCCAG
CTGCAAGCCGGGGATTGGAGCCGGCTTCCCAGCCAGGCCAGCAGCAGCAAAAGCCTGACCAGCGTGGAAGCCTCCCTGCG
GCTCGATGCCATTGCATCAGCTGGTTTTGGGGTTTCTCGCAGCAAGATGGCCACCTGGATCCGTCAAGGACGCATCCGCG
TGGATTGGGCCGTGGTGACCACACCGAGCCGCGAGCTGCAAAACGGAGAACGCGTCCAGCTGGAGGGGCGGGGCGAACTG
GTGTTGGATCGTGTGGATCGCACCAAACGAGACCGCTGGCGCCTGCAAATGACGCGGCGCCGGTAG

Upstream 100 bases:

>100_bases
TGCTGTTGATTGATGCCATACAAAGCGAAATGGTGCCCTGGGCCTTGATCCAGCGCTGCCGCCCGGCCAGCGTCGTGCGG
CTCAAGGACGATTAAGCGCC

Downstream 100 bases:

>100_bases
ACCTTCGGTGTGGTGGTAAGTTCCTTTCTCGGCCAACGGCTAGCGGGCCTCCCGCCTGGCCAAAGCCCAGCGGGCGATTA
GCTCAGAGGTAGAGCACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: S4-Like Domain-Containing Protein; S4 Domain-Containing Protein; Photosystem II S4 Domain-Containing Protein; S4 Domain Protein

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MMPRRDLLEGARDPQALEALIQQAEVVLRTYQPSWSAFLTGPQREEAEERFAPLGELHLRSAGGFPQAERRLLQISRSDQ
AADAGEPAPLALVEVSGNFLFDPAEPTAIRAALIDQHSIDPLHLGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQ
LQAGDWSRLPSQASSSKSLTSVEASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGEL
VLDRVDRTKRDRWRLQMTRRR

Sequences:

>Translated_261_residues
MMPRRDLLEGARDPQALEALIQQAEVVLRTYQPSWSAFLTGPQREEAEERFAPLGELHLRSAGGFPQAERRLLQISRSDQ
AADAGEPAPLALVEVSGNFLFDPAEPTAIRAALIDQHSIDPLHLGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQ
LQAGDWSRLPSQASSSKSLTSVEASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGEL
VLDRVDRTKRDRWRLQMTRRR
>Mature_261_residues
MMPRRDLLEGARDPQALEALIQQAEVVLRTYQPSWSAFLTGPQREEAEERFAPLGELHLRSAGGFPQAERRLLQISRSDQ
AADAGEPAPLALVEVSGNFLFDPAEPTAIRAALIDQHSIDPLHLGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQ
LQAGDWSRLPSQASSSKSLTSVEASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGEL
VLDRVDRTKRDRWRLQMTRRR

Specific function: Unknown

COG id: COG2302

COG function: function code S; Uncharacterized conserved protein, contains S4-like domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29037; Mature: 29037

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRRDLLEGARDPQALEALIQQAEVVLRTYQPSWSAFLTGPQREEAEERFAPLGELHLR
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCEEEC
SAGGFPQAERRLLQISRSDQAADAGEPAPLALVEVSGNFLFDPAEPTAIRAALIDQHSID
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCC
PLHLGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQLQAGDWSRLPSQASSSKSLT
CEECCCEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEEEECCCHHHCCCCCCCCCHHH
SVEASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGEL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHCCCCEEEECCCCCE
VLDRVDRTKRDRWRLQMTRRR
EEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMPRRDLLEGARDPQALEALIQQAEVVLRTYQPSWSAFLTGPQREEAEERFAPLGELHLR
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCEEEC
SAGGFPQAERRLLQISRSDQAADAGEPAPLALVEVSGNFLFDPAEPTAIRAALIDQHSID
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHCCCCC
PLHLGDVLVRGDRGALVIVTSAMAERLQEQSLQVRSVDCQLQAGDWSRLPSQASSSKSLT
CEECCCEEEECCCCEEEEEEHHHHHHHHHHCCEEEEEEEEEECCCHHHCCCCCCCCCHHH
SVEASLRLDAIASAGFGVSRSKMATWIRQGRIRVDWAVVTTPSRELQNGERVQLEGRGEL
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCHHHHCCCCEEEECCCCCE
VLDRVDRTKRDRWRLQMTRRR
EEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA