| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242757
Identifier: 148242757
GI number: 148242757
Start: 1451404
End: 1451844
Strand: Direct
Name: 148242757
Synonym: SynRCC307_1658
Alternate gene names: NA
Gene position: 1451404-1451844 (Clockwise)
Preceding gene: 148242754
Following gene: 148242760
Centisome position: 65.23
GC content: 65.76
Gene sequence:
>441_bases ATGGCGGAGCTTTTCAACGCCCTCCAACACGGCAGCGCGCCACTGGCTGCATCCCTGCTGCTCTCCGGTTTGGTGGTGAT GCTGAGCCTGGTGCCGCTGGGGGCTGCCCGTTCGCAGGCGGATTTCAGCATGGCTGATCTGGCCGCCCCTAGGGCCATGT TCGAGCGCCTGCCGGCCTGGGGACGCCGGGCCAGCTGGGCCCATCAAAACTGTTTTGAAGCCTTCACCCTGCATGCCCCC GCTTGCCTGCTGGCCCTAGTGGCTGGGGTGTCAGCACCGATTGCCATGGCGGCTGCCTGGCTACACCCACTGCTGCGGCT GCTCTACATCGGGGCCTATGTGGGCAATGTGCCGCCCCTGCGAGGACTCTGCTGGGCCTCGGCCCTGCTCTGCAGCGGCA TCCTCTATCTCGAGGGCCTCAAAGCCGTGCTTCAGCAATGA
Upstream 100 bases:
>100_bases TCGAAATCGCTGACAACATCAAAGCTGTAGGTGTCGGCCATGAAGGGCGGCAACGGCAGGGAATCCCATCAGCCTAGAAA GGGGCCCCTTGTGAGGACCC
Downstream 100 bases:
>100_bases GGCGGAGCCTCAATCAAAAAACAACAGCGTGACGACCTTGCCGAGATCTTCCGCGTCTTGGCAGGCCTGGATCAACGTTT CGCTGTCGTGGAAGGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAP ACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ
Sequences:
>Translated_146_residues MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAP ACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ >Mature_145_residues AELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAWGRRASWAHQNCFEAFTLHAPA CLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPLRGLCWASALLCSGILYLEGLKAVLQQ
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15449; Mature: 15317
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAW CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC GRRASWAHQNCFEAFTLHAPACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RGLCWASALLCSGILYLEGLKAVLQQ HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AELFNALQHGSAPLAASLLLSGLVVMLSLVPLGAARSQADFSMADLAAPRAMFERLPAW HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC GRRASWAHQNCFEAFTLHAPACLLALVAGVSAPIAMAAAWLHPLLRLLYIGAYVGNVPPL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RGLCWASALLCSGILYLEGLKAVLQQ HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA