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The map label for this gene is petJ

Identifier: 148242697

GI number: 148242697

Start: 1409873

End: 1410193

Strand: Direct

Name: petJ

Synonym: SynRCC307_1598

Alternate gene names: NA

Gene position: 1409873-1410193 (Clockwise)

Preceding gene: 148242692

Following gene: 148242702

Centisome position: 63.37

GC content: 58.88

Gene sequence:

>321_bases
ATGAAGTGGCTGGTTGGCTTTCTGCTGATGCTTGGGCTCTGGATGGCTCCAGCGCCAGTCCATGCCGCCGCCGATGGCGC
TGCCCTGTTTGAAGCCCATTGCGTGGGTTGCCACCTCAATGGCGGCAACATCATTCGCCGCGGCAAAACGCTGAAGCTCA
AAGCCCTCGAGCGCAATGGAATTGAAGGCCCACTAGAGATCGCGATGATCGCGACCGAAGGGCGCGGTCAAATGAGTGCC
TATGGCGAAGTGCTTGGCGAGGAAGGCGCTGATGCCGTTGCTGAATTCATCTGGCAACAAGCGCAAGAAGGCTGGTCCTA
G

Upstream 100 bases:

>100_bases
AGCACCAGCGGTGGCTTGGGGGACATCAAGGAGGCGCCTCGCATCCTCAGTGTCGTCATAGGAGCAGACTGACGCCAACT
TCTGACCGGGGCTGGAGCAG

Downstream 100 bases:

>100_bases
AACGCCTGAATCCAGGGATAGACCTCAACGGCGGTCCAGATGCCGTTACGCCAGTAGACGTCTCCTTTAACGAGGCCTTC
CACCTGCTCACGGCTCTCGG

Product: cytochrome C6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MKWLVGFLLMLGLWMAPAPVHAAADGAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNGIEGPLEIAMIATEGRGQMSA
YGEVLGEEGADAVAEFIWQQAQEGWS

Sequences:

>Translated_106_residues
MKWLVGFLLMLGLWMAPAPVHAAADGAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNGIEGPLEIAMIATEGRGQMSA
YGEVLGEEGADAVAEFIWQQAQEGWS
>Mature_106_residues
MKWLVGFLLMLGLWMAPAPVHAAADGAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNGIEGPLEIAMIATEGRGQMSA
YGEVLGEEGADAVAEFIWQQAQEGWS

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cellular thylakoid lumen (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PetJ subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11348; Mature: 11348

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWLVGFLLMLGLWMAPAPVHAAADGAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNG
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEEECCCCEEECCCEEEEEEECCCC
IEGPLEIAMIATEGRGQMSAYGEVLGEEGADAVAEFIWQQAQEGWS
CCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKWLVGFLLMLGLWMAPAPVHAAADGAALFEAHCVGCHLNGGNIIRRGKTLKLKALERNG
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEEEECCCCEEECCCEEEEEEECCCC
IEGPLEIAMIATEGRGQMSAYGEVLGEEGADAVAEFIWQQAQEGWS
CCCCEEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]