Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242680

Identifier: 148242680

GI number: 148242680

Start: 1396105

End: 1396557

Strand: Direct

Name: 148242680

Synonym: SynRCC307_1581

Alternate gene names: NA

Gene position: 1396105-1396557 (Clockwise)

Preceding gene: 148242679

Following gene: 148242687

Centisome position: 62.75

GC content: 62.91

Gene sequence:

>453_bases
ATGCCGGCTCCATGGCTGTTGGCCCAAGGACTGCTGATGGGTTGTCAGTTGATCGGCGGTCAACTGGAGTGCGTGCCGGG
GATGGACCACCTCAAGCCGCAGCAGGAAATCAAGGTGCTCAAACAGCAAATCGATGCCACCAGCCAGCGGGCCTCGGATT
TGCAAGCGGCGATTCAGACCCTGGGTGAGCTGGAGCTCGCAGGCGAAGCGATCGCCGGTCAGTTGATTGAAGCCCGCTGG
TTGGCTGCCAACCCAACAGGTCCACAGCCCACGCTGATCCACTGGTATCGGCAAGGTGAATCGGGCTGGTTACTGATTCC
AGGTGCCGTTGGCAGCAGCTACACCGCACAACCCAGCGATGTGGGCCTGGAGTTGATGGCTGTGGCGATCGTGATCACCC
CTGAGGGGCACCGGCGCGTGGCCTCAGGGCCGCTGGGGCCCGTGCGGCCTTAG

Upstream 100 bases:

>100_bases
GGAGCAAGCGCCCGGACTGAAAGATTTGCAGCTGGTGGAGGCGCTCATCAAAGCCGTTCACGGCTGAAATGCGCACAATT
CAGCTAGTTGCTTTGCCGCC

Downstream 100 bases:

>100_bases
CCCAGCATCGATTCCTGCTGCTTCACCAACTCAAAGAACTCGGCCTTGAGGCTGGGGTCATGGCGGAAATCACCGCGCAC
AACAGAGTTCACCATGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPAPWLLAQGLLMGCQLIGGQLECVPGMDHLKPQQEIKVLKQQIDATSQRASDLQAAIQTLGELELAGEAIAGQLIEARW
LAANPTGPQPTLIHWYRQGESGWLLIPGAVGSSYTAQPSDVGLELMAVAIVITPEGHRRVASGPLGPVRP

Sequences:

>Translated_150_residues
MPAPWLLAQGLLMGCQLIGGQLECVPGMDHLKPQQEIKVLKQQIDATSQRASDLQAAIQTLGELELAGEAIAGQLIEARW
LAANPTGPQPTLIHWYRQGESGWLLIPGAVGSSYTAQPSDVGLELMAVAIVITPEGHRRVASGPLGPVRP
>Mature_149_residues
PAPWLLAQGLLMGCQLIGGQLECVPGMDHLKPQQEIKVLKQQIDATSQRASDLQAAIQTLGELELAGEAIAGQLIEARWL
AANPTGPQPTLIHWYRQGESGWLLIPGAVGSSYTAQPSDVGLELMAVAIVITPEGHRRVASGPLGPVRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15929; Mature: 15797

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPWLLAQGLLMGCQLIGGQLECVPGMDHLKPQQEIKVLKQQIDATSQRASDLQAAIQT
CCCCHHHHHHHHHHHHHHCCEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGELELAGEAIAGQLIEARWLAANPTGPQPTLIHWYRQGESGWLLIPGAVGSSYTAQPSD
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHH
VGLELMAVAIVITPEGHRRVASGPLGPVRP
CCCEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAPWLLAQGLLMGCQLIGGQLECVPGMDHLKPQQEIKVLKQQIDATSQRASDLQAAIQT
CCCHHHHHHHHHHHHHHCCEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGELELAGEAIAGQLIEARWLAANPTGPQPTLIHWYRQGESGWLLIPGAVGSSYTAQPSD
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCHH
VGLELMAVAIVITPEGHRRVASGPLGPVRP
CCCEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA