| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242646
Identifier: 148242646
GI number: 148242646
Start: 1364537
End: 1364803
Strand: Direct
Name: 148242646
Synonym: SynRCC307_1547
Alternate gene names: NA
Gene position: 1364537-1364803 (Clockwise)
Preceding gene: 148242644
Following gene: 148242652
Centisome position: 61.33
GC content: 58.05
Gene sequence:
>267_bases ATGACTGCGTTACAGGACCCTGACGCAATCCGCCACTTTCAAAGCCTGATCGACGCCTGTCAAGAACTGACCTTGCGACA CCACAGCCCCTCGGAACTGAGGCTGTATGCCGATGGATTCATCCATGCGCTGCGCCGCAGCCAACAACTGGATCCCCTGA GCCAGCGGCGATTCGAAGAATTCATTGATCGCTGGCTGATGGATCCATCCAGCTTCTTTGGCCCGGACGGGGATCCGCGC ACCCTGTTTGAAACCGAGCGCCGCTAA
Upstream 100 bases:
>100_bases ACGCCTCAGAGGCAGACACACATTTAGACCTGTTACCTCTACCGTAAGCGGGTTTCTTCGGCATGCTGGTAACAGGCGAT GCCTTACCAGCTGTCCCCCC
Downstream 100 bases:
>100_bases ATCTCAGCCAAAGCAATAGTGCTTTTTCACGGCTTGGTGCACCTGCCAGGTGCAGCGCAAGCCAGCGCTGAACTCCACAA AATCCCCTGCACCAAAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPR TLFETERR
Sequences:
>Translated_88_residues MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPR TLFETERR >Mature_87_residues TALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEEFIDRWLMDPSSFFGPDGDPRT LFETERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10430; Mature: 10299
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIDRWLMDPSSFFGPDGDPRTLFETERR HHHHHHCCCHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TALQDPDAIRHFQSLIDACQELTLRHHSPSELRLYADGFIHALRRSQQLDPLSQRRFEE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIDRWLMDPSSFFGPDGDPRTLFETERR HHHHHHCCCHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA