Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242604

Identifier: 148242604

GI number: 148242604

Start: 1339057

End: 1340217

Strand: Direct

Name: 148242604

Synonym: SynRCC307_1505

Alternate gene names: NA

Gene position: 1339057-1340217 (Clockwise)

Preceding gene: 148242600

Following gene: 148242605

Centisome position: 60.18

GC content: 63.74

Gene sequence:

>1161_bases
ATGGCGCAGGCCCACCAACCATTGACAGCTGCGGAGGTCAGCGAGCTATTCCCAGCCGCCACACCCCACAGCAACATTGC
GCGCTACTGGCCCTACATCAGCTCGGCCCTTCAGGAGGAGGGCATCGGCGATCGAGCCATGGCCTTGCTGGCGTTGGCCA
CGATCCGGGCCGAAAGCGAAGGCTTTGAGCCGATTGATGAGCACCCATCCACATGGAACACGGCTCCCGGCGGCCATCCC
TACGGGCTTTACGACGAACGCCGTGATTTGGGCAACCTCGGCTCTGGCGATGGTGAAGCTTTTCGCGGCCGCGGCTTTGT
GCAACTCACCGGACGGGATAACTACGCCCGCTATGGCGAACAAATTGGCGTTGATCTGCTGAAGCGCCCAGAACTAGCCA
ATGACCCAGAAGTGGCCGCCCACCTTCTAGCCCGCTTCCTCAAAGAGCGTGAGGGACCGCTACGCCATGCCCTTGCCAGT
AACAACTTGGCTGCCGCCAGACGCCTGGTGAATGGAGGGCAGCATGGACTGAATCGCTTCAGCGACACCATTCGCCGCGG
CCAGCCAGTCACCGTGGCAGGCACCAGCAGCGCCTGCGACACCGGAGCCATTGCCGGACTCTCTCAGCAGGTGTTGGATC
GCCTCGAAACGCAGGGCGCCTTGGTGGCCATTGCGCACCCTCTGATCCAACTGGAGGGCGCCCACAACAACCCCTGGCTG
CAACCCCAGGCAGCCGAGGCTCTGATCGCTGCCGTTGAAGAGCGCGGCGAACCCTTGGTGATCAACAGCGCCCTGCGCAC
GCCCATGCAGCAGCACCTGATTCACCAACAAGCGCAGCGGGGCGAATGCGGCATTCAGGCGGCAGCACCTCCCCCGTTCA
GCAACCACAACAGCGGCCTCGCCATCGACATTGAAGATTCCAGCGGGTGGCGCCCCTATCTCGAGCGGCACGGCTGGCAA
TGGCTCGGGGCCTGGGACCCGATGCACTTTGACTACACAGGTGGAGGCGTGGACCTTGGGGGCGCCCAGGTGCTGGCCTT
CCAGGAGCTCTGGAATGAGCACAACCCCGAAGCCCCCCTCGTCGAAGACGGACTGTGGGGACCAGCCACAGCCGCCGCTG
TGGAACGCTCACCGGCAGCAGGGTTTCCCTTCAAGGCATGA

Upstream 100 bases:

>100_bases
CAGGGGAGCGCCCTTCCCGCTGTTGAGCTGAGCGAATCAACGGCCGCCAAGGTGGCAAGGGCAAGGCCATGGCTACACCA
GATAGGTCGATCACTGCACC

Downstream 100 bases:

>100_bases
GCACTGGCTTTGGGCCCAAGGGCTATTGGGATCAGCGTTTCGCCAGCGCGGGCTTTGTCTATGGGGAGCAGCCCAACGAT
TTCCTCAACGAGCACGCCTC

Product: chitinase-like domain-containing protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family; Chitinase; Chitinase-Like Domain-Containing Protein; D-Alanyl-D-Alanine Carboxypeptidase Family; Phage Encoded Lysozyme

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MAQAHQPLTAAEVSELFPAATPHSNIARYWPYISSALQEEGIGDRAMALLALATIRAESEGFEPIDEHPSTWNTAPGGHP
YGLYDERRDLGNLGSGDGEAFRGRGFVQLTGRDNYARYGEQIGVDLLKRPELANDPEVAAHLLARFLKEREGPLRHALAS
NNLAAARRLVNGGQHGLNRFSDTIRRGQPVTVAGTSSACDTGAIAGLSQQVLDRLETQGALVAIAHPLIQLEGAHNNPWL
QPQAAEALIAAVEERGEPLVINSALRTPMQQHLIHQQAQRGECGIQAAAPPPFSNHNSGLAIDIEDSSGWRPYLERHGWQ
WLGAWDPMHFDYTGGGVDLGGAQVLAFQELWNEHNPEAPLVEDGLWGPATAAAVERSPAAGFPFKA

Sequences:

>Translated_386_residues
MAQAHQPLTAAEVSELFPAATPHSNIARYWPYISSALQEEGIGDRAMALLALATIRAESEGFEPIDEHPSTWNTAPGGHP
YGLYDERRDLGNLGSGDGEAFRGRGFVQLTGRDNYARYGEQIGVDLLKRPELANDPEVAAHLLARFLKEREGPLRHALAS
NNLAAARRLVNGGQHGLNRFSDTIRRGQPVTVAGTSSACDTGAIAGLSQQVLDRLETQGALVAIAHPLIQLEGAHNNPWL
QPQAAEALIAAVEERGEPLVINSALRTPMQQHLIHQQAQRGECGIQAAAPPPFSNHNSGLAIDIEDSSGWRPYLERHGWQ
WLGAWDPMHFDYTGGGVDLGGAQVLAFQELWNEHNPEAPLVEDGLWGPATAAAVERSPAAGFPFKA
>Mature_385_residues
AQAHQPLTAAEVSELFPAATPHSNIARYWPYISSALQEEGIGDRAMALLALATIRAESEGFEPIDEHPSTWNTAPGGHPY
GLYDERRDLGNLGSGDGEAFRGRGFVQLTGRDNYARYGEQIGVDLLKRPELANDPEVAAHLLARFLKEREGPLRHALASN
NLAAARRLVNGGQHGLNRFSDTIRRGQPVTVAGTSSACDTGAIAGLSQQVLDRLETQGALVAIAHPLIQLEGAHNNPWLQ
PQAAEALIAAVEERGEPLVINSALRTPMQQHLIHQQAQRGECGIQAAAPPPFSNHNSGLAIDIEDSSGWRPYLERHGWQW
LGAWDPMHFDYTGGGVDLGGAQVLAFQELWNEHNPEAPLVEDGLWGPATAAAVERSPAAGFPFKA

Specific function: Unknown

COG id: COG3179

COG function: function code R; Predicted chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41662; Mature: 41531

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAHQPLTAAEVSELFPAATPHSNIARYWPYISSALQEEGIGDRAMALLALATIRAESE
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GFEPIDEHPSTWNTAPGGHPYGLYDERRDLGNLGSGDGEAFRGRGFVQLTGRDNYARYGE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCEEEECCCCCHHHHHH
QIGVDLLKRPELANDPEVAAHLLARFLKEREGPLRHALASNNLAAARRLVNGGQHGLNRF
HHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHH
SDTIRRGQPVTVAGTSSACDTGAIAGLSQQVLDRLETQGALVAIAHPLIQLEGAHNNPWL
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCCC
QPQAAEALIAAVEERGEPLVINSALRTPMQQHLIHQQAQRGECGIQAAAPPPFSNHNSGL
CHHHHHHHHHHHHHCCCCEEEEHHHHCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCE
AIDIEDSSGWRPYLERHGWQWLGAWDPMHFDYTGGGVDLGGAQVLAFQELWNEHNPEAPL
EEEECCCCCCCHHHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
VEDGLWGPATAAAVERSPAAGFPFKA
CCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AQAHQPLTAAEVSELFPAATPHSNIARYWPYISSALQEEGIGDRAMALLALATIRAESE
CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
GFEPIDEHPSTWNTAPGGHPYGLYDERRDLGNLGSGDGEAFRGRGFVQLTGRDNYARYGE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEECCCCEEEECCCCCHHHHHH
QIGVDLLKRPELANDPEVAAHLLARFLKEREGPLRHALASNNLAAARRLVNGGQHGLNRF
HHCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCHHHHHHH
SDTIRRGQPVTVAGTSSACDTGAIAGLSQQVLDRLETQGALVAIAHPLIQLEGAHNNPWL
HHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCCC
QPQAAEALIAAVEERGEPLVINSALRTPMQQHLIHQQAQRGECGIQAAAPPPFSNHNSGL
CHHHHHHHHHHHHHCCCCEEEEHHHHCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCE
AIDIEDSSGWRPYLERHGWQWLGAWDPMHFDYTGGGVDLGGAQVLAFQELWNEHNPEAPL
EEEECCCCCCCHHHHHCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCC
VEDGLWGPATAAAVERSPAAGFPFKA
CCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA