Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148242591

Identifier: 148242591

GI number: 148242591

Start: 1327927

End: 1330692

Strand: Direct

Name: 148242591

Synonym: SynRCC307_1492

Alternate gene names: NA

Gene position: 1327927-1330692 (Clockwise)

Preceding gene: 148242588

Following gene: 148242593

Centisome position: 59.68

GC content: 62.0

Gene sequence:

>2766_bases
ATGAAACGTTTGAGCCGTCCCGCTGTGCTGCTGGCCATCGCCGCCGCGGCGATGGTGTTGGTCGTGCTGCCGCGGTTGTG
GATTGAACTGCAGTGGTTTCAACAATTTGAACTGGGGCCCGTGGTGCTCAAGCGCTGGGGCTTGCAATTTCTTGCCCTGG
CGCTGGTGCTGGGGATCGGCATCCCAGTGCAACTCAATCAGTTGCAACGCTGCTGGAAGCTGCGCCGGCGTGACCAGGCC
TACCGCGGCGAAAGCATGTTCATGCCCCTTCGCAGCTGGGGCTTACTGGTATCACTGGTGATCGCGCTCGGCCTGCTGAG
CACCGCCACCTCTTATTTATTTGTGCAGGCCCTCGGGCTGCTGCAAGAGCCGTTCAGCGGCATTGTCCTGAGCAGCTTCC
CGGTGCTGGGGTCACTGCCACTGCCACTGGTGCTGGGCATTGCAGCGGTGTTGTTGGTGTTTCTGCTGCGGTGGCCGCTG
ACCACCTTGAGAATCAGCCTCAGCCTGTCGATCCTGGCCTCAGCAACGGCCCTGGCTCGGGCCTGGAGCTTCTGGTTGCC
GGCGATCTTGGCATCGCCGTTTGGCGAAGGCGACCCGGTCACCGGCATTGACCTCAGCTTCACAGTGCTGCGCTTACCGG
CCTTCCAGTTGGTGCTCAGCGTGCTGATGGCCCAAGGCCTGGTCGGCTTAAGCGCCTGCTTTTGGTTGTGCCTCAGCCAA
GGCAACACCTTGAGCGACTGGCGCTTCGCTGGTTTCAACCGTCAACAGCAAGCGGTGCTGCGGCCGCAGCTGGCGGTGCT
GGCCCTGGTGGCCGCACTGATGGCCTCCCTGGCGCCGTTTGAACTCATGGTGCAAAGCCATGGCGTGGTGGCTGGTGCCG
GCTGGGTGGATTTGCACTTGCGGCTGCCGCTGAGGCTTCTGCTCAGCCTGGTGCTGCTCACGATGCTGTTCAGCTTGCTG
CTGCCACTGCCGCAGCGGCGGCGCCTGCTGTTGCCGGTGTCGATCACGGCACTGCTGTTGCCGATCGCGGAAGTCATCGC
CGCACCCCTGGTGCAGAAATTGCTGGTGCAGCCGCGGGAACTGCAGATGGAGCGCCCCTATCTCAAACGCATGATCCAAG
GCACACGGCAAGCCTTTGATCTCAACAGGATGCGGGTGAGCACGCTCAACCCCAGACAACAACTGACCGCTGCCGATCTC
GAGCAGTCCCCCGGCACGATCGACAACATCCGCCTTTGGGACACCCAACCGTTGCTGGAAGCCAACGCCCAGCTGCAACA
ACTGCGGCTGGTCTACGACTTCTGGTCTGCTGCCGTTGACCGCTACCAACTCAGCGACGACCTCAGCCAAGGCCGGCAAC
AGGTGATGGTGGCGGCCCGGGAAATTGATATCACGGCACTGCCCGCGACCTCCCGGACCTGGCTGAACCAACACCTTGTG
TTCACCCATGGTTTTGGCTTCACCGTCTCACCGGTCAACAGCTGGGGCCCCGACGGACTACCGGAGTACTTCGTCAAAGA
TCTGGGGCGCAACAGCGTGGTTCAGGGGTTGCCCAACCTGGGTGTCACCACAGCCCAGGCCGTTGCAGCCTTTCCGATTG
GCAAACCAGAGCTTTATTACGGCGCCTCGCCATCGCTCTATGCCGTGGCACCCAGCAAGGTGCGCGAGTTCAACTACCCC
GATGGGGAAGAGAACCTCTATTCGCACTACAGCGGTGACGGCGGCCTCCCCATTGGCCATCCGTTGCAGCGGCTTCTGGC
TGCAGCCTATTTGAGAGAACCACGGCTGCTGTTTGACGGCTCACTGCGGCACGACAGCCGCCTGCTGTTGCGGCGCCAAG
TTCAAGAGCGGCTCGACGCCATTGCCCCCTTCCTCACCTTTGAAAGCCAGCCCTACCTCGTCACCGCGCGGGTTCCCGCC
GTGGATGGCTACCGGGCTGAGCAGCACCAGTACTGGTTGCTCGATGGCTTCACCAGCAGCCGCTCCTACCCCTACAGCGC
CGCCAACCCCAGCGGCATCCGTTACTTCCGCAACCCGGTCAAGGTGGTGGTGGATGCCCTCAACGGCCGTGTCTGGATCT
ACGTGATGGATCCCGGTGACCCGGTGCTGCGCACATGGCGCAATGCCTTCCCGGAGATGTTCCGGTCGTTGGAGTCGATG
CCGCTGGCGCTGCGCGATCACCTGCTGGTTCCCAAAACCCAGTTCCAAGTTCAGGCCGAACGCTTGCTGCGCTTTCACGT
CACCGATGTGCGCAGCTTCTACAACGGCGACGACGTTTGGGGCATTCCCAAGGAGATCTATGGCTCCAAGCAAGTGGAGG
TCAGGCCGTACCACGTCACCATGCAATTGCCGGGCAAAGACACCCCGGAATTTGTGTTGCTGCTGCCTTTCACCCCCCTG
CGGCGGCCCAACATGGTGAGCTGGCTGGCGGCGCGCAACACCGTTGCCGATTACGGCCAACTGCGGCTGTGGCGTTTCCC
GCAGCAACGCCTGCTGCTGGGCCCACAGCAGATCTCCGCCTTAATCGAACAGGATCCTGAAATCAGCCGTCAATTCGGTC
TTTGGAACCGAGAGGGCTCGCGCGTGTTGCAGGGCAACCTGCTGGTGATTCCCTTGGGCAAGGGACTGCTCTATGTCGAA
CCGATTTATCTGCAGGCCCGCAACGGCGGCATTCCCACCTTGGTGAAGGTGATCGTCACCGATGGTCGCCGATTTGTGAT
GGAGGACGATCTCAACAGCGCCCTGCGAAAGCTGGTGGCCTCGTAG

Upstream 100 bases:

>100_bases
AAACCGTAGCAGCGCCAAGCTCGGCTCCTGGTTAATCCCGACTCTCACCATCGGGCTTAGCTGATCATGCCAGATCGCAC
GTGCTGACTAGCCTCTGCCC

Downstream 100 bases:

>100_bases
GCACAAAAAAAGGGCCCCGCAGGGCCCCTTCGATGCGTTGAACGTCTAACGCTGAATCAGGCAGCAACAGCAACCTTGCT
GTCCAGGGCGCCTTTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 921; Mature: 921

Protein sequence:

>921_residues
MKRLSRPAVLLAIAAAAMVLVVLPRLWIELQWFQQFELGPVVLKRWGLQFLALALVLGIGIPVQLNQLQRCWKLRRRDQA
YRGESMFMPLRSWGLLVSLVIALGLLSTATSYLFVQALGLLQEPFSGIVLSSFPVLGSLPLPLVLGIAAVLLVFLLRWPL
TTLRISLSLSILASATALARAWSFWLPAILASPFGEGDPVTGIDLSFTVLRLPAFQLVLSVLMAQGLVGLSACFWLCLSQ
GNTLSDWRFAGFNRQQQAVLRPQLAVLALVAALMASLAPFELMVQSHGVVAGAGWVDLHLRLPLRLLLSLVLLTMLFSLL
LPLPQRRRLLLPVSITALLLPIAEVIAAPLVQKLLVQPRELQMERPYLKRMIQGTRQAFDLNRMRVSTLNPRQQLTAADL
EQSPGTIDNIRLWDTQPLLEANAQLQQLRLVYDFWSAAVDRYQLSDDLSQGRQQVMVAAREIDITALPATSRTWLNQHLV
FTHGFGFTVSPVNSWGPDGLPEYFVKDLGRNSVVQGLPNLGVTTAQAVAAFPIGKPELYYGASPSLYAVAPSKVREFNYP
DGEENLYSHYSGDGGLPIGHPLQRLLAAAYLREPRLLFDGSLRHDSRLLLRRQVQERLDAIAPFLTFESQPYLVTARVPA
VDGYRAEQHQYWLLDGFTSSRSYPYSAANPSGIRYFRNPVKVVVDALNGRVWIYVMDPGDPVLRTWRNAFPEMFRSLESM
PLALRDHLLVPKTQFQVQAERLLRFHVTDVRSFYNGDDVWGIPKEIYGSKQVEVRPYHVTMQLPGKDTPEFVLLLPFTPL
RRPNMVSWLAARNTVADYGQLRLWRFPQQRLLLGPQQISALIEQDPEISRQFGLWNREGSRVLQGNLLVIPLGKGLLYVE
PIYLQARNGGIPTLVKVIVTDGRRFVMEDDLNSALRKLVAS

Sequences:

>Translated_921_residues
MKRLSRPAVLLAIAAAAMVLVVLPRLWIELQWFQQFELGPVVLKRWGLQFLALALVLGIGIPVQLNQLQRCWKLRRRDQA
YRGESMFMPLRSWGLLVSLVIALGLLSTATSYLFVQALGLLQEPFSGIVLSSFPVLGSLPLPLVLGIAAVLLVFLLRWPL
TTLRISLSLSILASATALARAWSFWLPAILASPFGEGDPVTGIDLSFTVLRLPAFQLVLSVLMAQGLVGLSACFWLCLSQ
GNTLSDWRFAGFNRQQQAVLRPQLAVLALVAALMASLAPFELMVQSHGVVAGAGWVDLHLRLPLRLLLSLVLLTMLFSLL
LPLPQRRRLLLPVSITALLLPIAEVIAAPLVQKLLVQPRELQMERPYLKRMIQGTRQAFDLNRMRVSTLNPRQQLTAADL
EQSPGTIDNIRLWDTQPLLEANAQLQQLRLVYDFWSAAVDRYQLSDDLSQGRQQVMVAAREIDITALPATSRTWLNQHLV
FTHGFGFTVSPVNSWGPDGLPEYFVKDLGRNSVVQGLPNLGVTTAQAVAAFPIGKPELYYGASPSLYAVAPSKVREFNYP
DGEENLYSHYSGDGGLPIGHPLQRLLAAAYLREPRLLFDGSLRHDSRLLLRRQVQERLDAIAPFLTFESQPYLVTARVPA
VDGYRAEQHQYWLLDGFTSSRSYPYSAANPSGIRYFRNPVKVVVDALNGRVWIYVMDPGDPVLRTWRNAFPEMFRSLESM
PLALRDHLLVPKTQFQVQAERLLRFHVTDVRSFYNGDDVWGIPKEIYGSKQVEVRPYHVTMQLPGKDTPEFVLLLPFTPL
RRPNMVSWLAARNTVADYGQLRLWRFPQQRLLLGPQQISALIEQDPEISRQFGLWNREGSRVLQGNLLVIPLGKGLLYVE
PIYLQARNGGIPTLVKVIVTDGRRFVMEDDLNSALRKLVAS
>Mature_921_residues
MKRLSRPAVLLAIAAAAMVLVVLPRLWIELQWFQQFELGPVVLKRWGLQFLALALVLGIGIPVQLNQLQRCWKLRRRDQA
YRGESMFMPLRSWGLLVSLVIALGLLSTATSYLFVQALGLLQEPFSGIVLSSFPVLGSLPLPLVLGIAAVLLVFLLRWPL
TTLRISLSLSILASATALARAWSFWLPAILASPFGEGDPVTGIDLSFTVLRLPAFQLVLSVLMAQGLVGLSACFWLCLSQ
GNTLSDWRFAGFNRQQQAVLRPQLAVLALVAALMASLAPFELMVQSHGVVAGAGWVDLHLRLPLRLLLSLVLLTMLFSLL
LPLPQRRRLLLPVSITALLLPIAEVIAAPLVQKLLVQPRELQMERPYLKRMIQGTRQAFDLNRMRVSTLNPRQQLTAADL
EQSPGTIDNIRLWDTQPLLEANAQLQQLRLVYDFWSAAVDRYQLSDDLSQGRQQVMVAAREIDITALPATSRTWLNQHLV
FTHGFGFTVSPVNSWGPDGLPEYFVKDLGRNSVVQGLPNLGVTTAQAVAAFPIGKPELYYGASPSLYAVAPSKVREFNYP
DGEENLYSHYSGDGGLPIGHPLQRLLAAAYLREPRLLFDGSLRHDSRLLLRRQVQERLDAIAPFLTFESQPYLVTARVPA
VDGYRAEQHQYWLLDGFTSSRSYPYSAANPSGIRYFRNPVKVVVDALNGRVWIYVMDPGDPVLRTWRNAFPEMFRSLESM
PLALRDHLLVPKTQFQVQAERLLRFHVTDVRSFYNGDDVWGIPKEIYGSKQVEVRPYHVTMQLPGKDTPEFVLLLPFTPL
RRPNMVSWLAARNTVADYGQLRLWRFPQQRLLLGPQQISALIEQDPEISRQFGLWNREGSRVLQGNLLVIPLGKGLLYVE
PIYLQARNGGIPTLVKVIVTDGRRFVMEDDLNSALRKLVAS

Specific function: Unknown

COG id: COG1615

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0182 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005372 [H]

Pfam domain/function: PF03699 UPF0182 [H]

EC number: NA

Molecular weight: Translated: 103337; Mature: 103337

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLSRPAVLLAIAAAAMVLVVLPRLWIELQWFQQFELGPVVLKRWGLQFLALALVLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
IPVQLNQLQRCWKLRRRDQAYRGESMFMPLRSWGLLVSLVIALGLLSTATSYLFVQALGL
CCEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEPFSGIVLSSFPVLGSLPLPLVLGIAAVLLVFLLRWPLTTLRISLSLSILASATALAR
HHCCCCCEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AWSFWLPAILASPFGEGDPVTGIDLSFTVLRLPAFQLVLSVLMAQGLVGLSACFWLCLSQ
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNTLSDWRFAGFNRQQQAVLRPQLAVLALVAALMASLAPFELMVQSHGVVAGAGWVDLHL
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEEE
RLPLRLLLSLVLLTMLFSLLLPLPQRRRLLLPVSITALLLPIAEVIAAPLVQKLLVQPRE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQMERPYLKRMIQGTRQAFDLNRMRVSTLNPRQQLTAADLEQSPGTIDNIRLWDTQPLLE
HHCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHH
ANAQLQQLRLVYDFWSAAVDRYQLSDDLSQGRQQVMVAAREIDITALPATSRTWLNQHLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCEE
FTHGFGFTVSPVNSWGPDGLPEYFVKDLGRNSVVQGLPNLGVTTAQAVAAFPIGKPELYY
EEECCCCEECCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEE
GASPSLYAVAPSKVREFNYPDGEENLYSHYSGDGGLPIGHPLQRLLAAAYLREPRLLFDG
CCCCCEEEECHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC
SLRHDSRLLLRRQVQERLDAIAPFLTFESQPYLVTARVPAVDGYRAEQHQYWLLDGFTSS
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
RSYPYSAANPSGIRYFRNPVKVVVDALNGRVWIYVMDPGDPVLRTWRNAFPEMFRSLESM
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PLALRDHLLVPKTQFQVQAERLLRFHVTDVRSFYNGDDVWGIPKEIYGSKQVEVRPYHVT
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEEE
MQLPGKDTPEFVLLLPFTPLRRPNMVSWLAARNTVADYGQLRLWRFPQQRLLLGPQQISA
EECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHH
LIEQDPEISRQFGLWNREGSRVLQGNLLVIPLGKGLLYVEPIYLQARNGGIPTLVKVIVT
HHHCCHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHH
DGRRFVMEDDLNSALRKLVAS
CCCEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRLSRPAVLLAIAAAAMVLVVLPRLWIELQWFQQFELGPVVLKRWGLQFLALALVLGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
IPVQLNQLQRCWKLRRRDQAYRGESMFMPLRSWGLLVSLVIALGLLSTATSYLFVQALGL
CCEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQEPFSGIVLSSFPVLGSLPLPLVLGIAAVLLVFLLRWPLTTLRISLSLSILASATALAR
HHCCCCCEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AWSFWLPAILASPFGEGDPVTGIDLSFTVLRLPAFQLVLSVLMAQGLVGLSACFWLCLSQ
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GNTLSDWRFAGFNRQQQAVLRPQLAVLALVAALMASLAPFELMVQSHGVVAGAGWVDLHL
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCEEEEEE
RLPLRLLLSLVLLTMLFSLLLPLPQRRRLLLPVSITALLLPIAEVIAAPLVQKLLVQPRE
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LQMERPYLKRMIQGTRQAFDLNRMRVSTLNPRQQLTAADLEQSPGTIDNIRLWDTQPLLE
HHCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHH
ANAQLQQLRLVYDFWSAAVDRYQLSDDLSQGRQQVMVAAREIDITALPATSRTWLNQHLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCEE
FTHGFGFTVSPVNSWGPDGLPEYFVKDLGRNSVVQGLPNLGVTTAQAVAAFPIGKPELYY
EEECCCCEECCCCCCCCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHCCCCCCCEEE
GASPSLYAVAPSKVREFNYPDGEENLYSHYSGDGGLPIGHPLQRLLAAAYLREPRLLFDG
CCCCCEEEECHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC
SLRHDSRLLLRRQVQERLDAIAPFLTFESQPYLVTARVPAVDGYRAEQHQYWLLDGFTSS
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC
RSYPYSAANPSGIRYFRNPVKVVVDALNGRVWIYVMDPGDPVLRTWRNAFPEMFRSLESM
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PLALRDHLLVPKTQFQVQAERLLRFHVTDVRSFYNGDDVWGIPKEIYGSKQVEVRPYHVT
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEEE
MQLPGKDTPEFVLLLPFTPLRRPNMVSWLAARNTVADYGQLRLWRFPQQRLLLGPQQISA
EECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCHHHHHH
LIEQDPEISRQFGLWNREGSRVLQGNLLVIPLGKGLLYVEPIYLQARNGGIPTLVKVIVT
HHHCCHHHHHHCCCCCCCCCEEEECCEEEEECCCCEEEEEEEEEEECCCCCHHHHHHHHH
DGRRFVMEDDLNSALRKLVAS
CCCEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]