| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242538
Identifier: 148242538
GI number: 148242538
Start: 1279073
End: 1279759
Strand: Direct
Name: 148242538
Synonym: SynRCC307_1439
Alternate gene names: NA
Gene position: 1279073-1279759 (Clockwise)
Preceding gene: 148242537
Following gene: 148242542
Centisome position: 57.49
GC content: 64.48
Gene sequence:
>687_bases ATGCAACCGGTGGTGGTCCTTGGTGGGTTTCTGATCACCGATGAGGCCTACGGACCAATGGCTCAGTGGTTGCACGGGCA GGGCGACACTGATGTGAGCGTGGTGCATGCCAGCCGCTTGGATTGGTTGCTTACCAGCTCAGCTTGGGGCTGGCAGCGCT TGCTCCGGCGCGTCGATCAAACCGTGCGGCAAGCCCGCCGTCGCTGCGCAGGAGAACCCGTGACCCTGATCGGCCATAGC TCCGGCGGTGTGATGTTGCGGCTCTATCTCGCTGAGCGCGGCCTTGAGGGCGCCAGCCTCAACGGTCGCCAACTTTGCAA TCGCCTGATCTGCCTCGGCAGTCCCCACCAGGCCAAGCGCGCCACTCGGCTGCGGGCGATGGTGGACCGGCTGCTCCCTG GCTGCGCTTGTGCGCCGGAAGTGGACTATGTCTCCGTTGCTGGCCATTTGGATCTGGCCAGCGCGCAAGCCAGCGGCTTT GCTCGCCGCAGCGCGGCCAACTCCTACAAGCAAATCGGCGCCAAGCCCGAAGATCCCGGCGATGGCTTGGTGCCCGTGAG CTCGGCCTGGCTCAAGGGTTCAAAGCTGATCGAACTGGAGGCCACTGCCCATGGGGGCCTGTTTGGCCAGCCTTGGTATG GCTCGATCGAACGGGTCAGCCAGTGGTGGCCGCAAGCCAACAGTTAG
Upstream 100 bases:
>100_bases TCTTGTTAATGGTGATCGGCACCACGTTCCTAGCCCCGCTGCTGTTGCGCTTTGTGCTGACCAAGAACGAAACAGCGGCT GAAGCCAGCTGAGAAGCTCC
Downstream 100 bases:
>100_bases TCACCGCCATTTCGCACAACCTCTACAGACAACAAAAAGCCCCCTCCGAGGAGGGGGCTTTCCGATTCAGTTGATCTGAA TCGTTTGTTGATTCCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MQPVVVLGGFLITDEAYGPMAQWLHGQGDTDVSVVHASRLDWLLTSSAWGWQRLLRRVDQTVRQARRRCAGEPVTLIGHS SGGVMLRLYLAERGLEGASLNGRQLCNRLICLGSPHQAKRATRLRAMVDRLLPGCACAPEVDYVSVAGHLDLASAQASGF ARRSAANSYKQIGAKPEDPGDGLVPVSSAWLKGSKLIELEATAHGGLFGQPWYGSIERVSQWWPQANS
Sequences:
>Translated_228_residues MQPVVVLGGFLITDEAYGPMAQWLHGQGDTDVSVVHASRLDWLLTSSAWGWQRLLRRVDQTVRQARRRCAGEPVTLIGHS SGGVMLRLYLAERGLEGASLNGRQLCNRLICLGSPHQAKRATRLRAMVDRLLPGCACAPEVDYVSVAGHLDLASAQASGF ARRSAANSYKQIGAKPEDPGDGLVPVSSAWLKGSKLIELEATAHGGLFGQPWYGSIERVSQWWPQANS >Mature_228_residues MQPVVVLGGFLITDEAYGPMAQWLHGQGDTDVSVVHASRLDWLLTSSAWGWQRLLRRVDQTVRQARRRCAGEPVTLIGHS SGGVMLRLYLAERGLEGASLNGRQLCNRLICLGSPHQAKRATRLRAMVDRLLPGCACAPEVDYVSVAGHLDLASAQASGF ARRSAANSYKQIGAKPEDPGDGLVPVSSAWLKGSKLIELEATAHGGLFGQPWYGSIERVSQWWPQANS
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24725; Mature: 24725
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPVVVLGGFLITDEAYGPMAQWLHGQGDTDVSVVHASRLDWLLTSSAWGWQRLLRRVDQ CCCEEEECCEEEECCCCCHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHH TVRQARRRCAGEPVTLIGHSSGGVMLRLYLAERGLEGASLNGRQLCNRLICLGSPHQAKR HHHHHHHHHCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH ATRLRAMVDRLLPGCACAPEVDYVSVAGHLDLASAQASGFARRSAANSYKQIGAKPEDPG HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DGLVPVSSAWLKGSKLIELEATAHGGLFGQPWYGSIERVSQWWPQANS CCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MQPVVVLGGFLITDEAYGPMAQWLHGQGDTDVSVVHASRLDWLLTSSAWGWQRLLRRVDQ CCCEEEECCEEEECCCCCHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHH TVRQARRRCAGEPVTLIGHSSGGVMLRLYLAERGLEGASLNGRQLCNRLICLGSPHQAKR HHHHHHHHHCCCCEEEEEECCCCEEEEEEEHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH ATRLRAMVDRLLPGCACAPEVDYVSVAGHLDLASAQASGFARRSAANSYKQIGAKPEDPG HHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DGLVPVSSAWLKGSKLIELEATAHGGLFGQPWYGSIERVSQWWPQANS CCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA