| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is katG
Identifier: 148242533
GI number: 148242533
Start: 1270631
End: 1272829
Strand: Direct
Name: katG
Synonym: SynRCC307_1434
Alternate gene names: 148242533
Gene position: 1270631-1272829 (Clockwise)
Preceding gene: 148242530
Following gene: 148242537
Centisome position: 57.11
GC content: 60.57
Gene sequence:
>2199_bases GTGTCGATGGCGGAAATGCGTTGCCCATTCAGCGGCCATGGCGCCGCCACAACACCAGCGAGCGCCACTACCAATCAGCA CTGGTGGCCTGAGCAAATCAACCTGGGACTGCTGCATCAACACAATCCAGCGGCGAACCCCCTAGGCAGCAACTTTGACT ACCGCCAAGCCTTCAACAGCCTGGATCTCAATGCTGTGAAAGCCGACCTTATGGCATTGATGACCGACAGCCAGAGCTGG TGGCCGGCGGACTGGGGACACTACGGCGGCCTGTTCATTCGGATGGCATGGCATAGCGCCGGCACCTACCGCCTCGCTGA TGGTCGTGGCGGGGCAGGCCATGGCAACCAACGTTTTGCTCCCCTCAACAGCTGGCCTGACAACACCAACCTCGACAAAG CCCGGCGGCTCCTCTGGCCCATCAAGGCCAAATACGGCAGCAACCTCTCATGGGCTGATCTGATCATCCTGGCCGGCAAC TGCGCCCTCGAATCCATGGGATTGCCAACAGCTGGCTTTGCTGGAGGCCGCGAAGACATCTGGGAACCAGAAGACGACAT CTACTGGGGAAGCGAAACCAGCTGGCTGAGCGATGAACGCCATGACAACGACGGGGCCATCGAAAGCCCCTTGGCGGCAA CCGAAATGGGGTTGATCTACGTCAACCCAGAAGGCCCGCACGGTGAACCAGACCCGGTTGCCTCAGGGCGCGAGGTGCGT GACACCTTTGCCCGCATGGGCATGAACAACGAAGAAACCGTGGCTCTGGTGGCCGGCGGGCACACCTTCGGCAAAGCCCA TGGAGCCGCACCCAGCGCCCACCTTGGAGCGGATCCAGAAGGTGCAGCCCTCGAGCAGCTGGGCTTGGGCTGGCAGAACA CCTATGCCAGTGGCTGCGGTGCTGACACCATTACCAGCGGCATTGAAGGGGCCTGGAAACCCAACCCAACCCGGTGGGAT CAAGGCTATTTCGAGATGTTGTTTGGCTACGAGTGGGAGCTGCATCAAAGCCCTGCGGGCGCTTGGCAGTGGCACCCCAA AGACGTCAAAGCCGAGCACATGATTCCCGATGCCCATGTGCCCGGGCGCAGTGCACCGCCAATGATGACCACAGCCGATC TGTCACTGCGGTTTGACCCCGTCTATGAACCAATCGCGCGCCGATTTCTCGGCGACCCACAAGCCTTTGGCAACGCCTTT GCTCAGGCCTGGTTCAAGTTGACCCATCGGGATCTCGGTCCGCGCAGCTGCTACCTCGGCGCTGATGTGCCCGAGGCAGT GATGAGTTGGCAAGATCCCTTGCCAACCACGAGCCATCCAACCATCGATGCCCCAGCGGTTGATGCTCTCAAGCAAGAGC TTCTGAACACTGGCCTCAGCCATGGCGAGCTGATCAGCACCGCCTGGGCCTCTGCTGCCAGTTTTCGACAATCCGATCGC CGCGGAGGGGCCAATGGCGCTCGCTTGCGCTTGCAACCGCAGTGCAACTGGGAACTGAACAACCCCGAGCAACTCAAGCG CGTGCTGAGCGTTCTCGAAGCTGTGCAAATGCGCTTCAACCAGCAGCATCAAGGCGGCATGCAGGTGTCGCTGGCTGATT TGATCGTTCTGAGCGGCAGCGCTGCAGTGGAGCAAGCCATGGCGGCTACCGGCCAGCGCTGCCGAGTGCGCTTTACGCCG GGGCGTGTAGATGCCAGCGCTGAGCAGACCGACAACGCTTCATTCAATGCCCTCAAACCCATCGCCGATGGCTTTCGCAA TTACCTGCGCAGCGATCTACCCCTTAAGGCTGAACAGCTGCTGGTGGATCGCGCCCAACAGCTGCATCTGAGCGCACCGG AGATGACAGCCCTGATCGGGGGATTCAGGGTGCTGGGGCTGAACTGGGATGGCAGCGACATCGGGGTGTTCACAAGCAGG CCAGGACAGTTCAGCAACGACTTCTTCGTCAACTTGCTGGATATGTCAACGCAGTGGAGCCCGGTTGAGGGCCATAGCAA CCTGTATCAAGGCATTGATACCGAAACCAAGCAGCCCCGCTGGCGAGCCAGCCGCGTGGATTTGGTGTTTGGCTCCCATG CTCAATTGCGTGCCATTGCCGAGGTGTATGGGCAAGCGGGCGGGTCAGCAAGACTGGCAGCTGATTTCAGCGCTGCCTGG AGCAAGGTGATGGAGCTCGACCGCTTCGACCTGCTTTAG
Upstream 100 bases:
>100_bases GGAGCGGAATGCAGATCAATGTCCATCTCTTCAGCCTGGAGAGAGCGCGTTAAGAGAAGCCTTAACGCGGGCTAACTAAT CCAGAGACACCTAGCAGAAC
Downstream 100 bases:
>100_bases GGCTAGACGCTCAACGGCCCCACCAGTGGTGGTGATAGGAGGGATCGCTACTGCCAGCCTGCAACTGGCGGGTGGTTTCG ATCACGATGGCCGCCAACGA
Product: catalase/peroxidase
Products: NA
Alternate protein names: CP; Peroxidase/catalase
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MSMAEMRCPFSGHGAATTPASATTNQHWWPEQINLGLLHQHNPAANPLGSNFDYRQAFNSLDLNAVKADLMALMTDSQSW WPADWGHYGGLFIRMAWHSAGTYRLADGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKAKYGSNLSWADLIILAGN CALESMGLPTAGFAGGREDIWEPEDDIYWGSETSWLSDERHDNDGAIESPLAATEMGLIYVNPEGPHGEPDPVASGREVR DTFARMGMNNEETVALVAGGHTFGKAHGAAPSAHLGADPEGAALEQLGLGWQNTYASGCGADTITSGIEGAWKPNPTRWD QGYFEMLFGYEWELHQSPAGAWQWHPKDVKAEHMIPDAHVPGRSAPPMMTTADLSLRFDPVYEPIARRFLGDPQAFGNAF AQAWFKLTHRDLGPRSCYLGADVPEAVMSWQDPLPTTSHPTIDAPAVDALKQELLNTGLSHGELISTAWASAASFRQSDR RGGANGARLRLQPQCNWELNNPEQLKRVLSVLEAVQMRFNQQHQGGMQVSLADLIVLSGSAAVEQAMAATGQRCRVRFTP GRVDASAEQTDNASFNALKPIADGFRNYLRSDLPLKAEQLLVDRAQQLHLSAPEMTALIGGFRVLGLNWDGSDIGVFTSR PGQFSNDFFVNLLDMSTQWSPVEGHSNLYQGIDTETKQPRWRASRVDLVFGSHAQLRAIAEVYGQAGGSARLAADFSAAW SKVMELDRFDLL
Sequences:
>Translated_732_residues MSMAEMRCPFSGHGAATTPASATTNQHWWPEQINLGLLHQHNPAANPLGSNFDYRQAFNSLDLNAVKADLMALMTDSQSW WPADWGHYGGLFIRMAWHSAGTYRLADGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKAKYGSNLSWADLIILAGN CALESMGLPTAGFAGGREDIWEPEDDIYWGSETSWLSDERHDNDGAIESPLAATEMGLIYVNPEGPHGEPDPVASGREVR DTFARMGMNNEETVALVAGGHTFGKAHGAAPSAHLGADPEGAALEQLGLGWQNTYASGCGADTITSGIEGAWKPNPTRWD QGYFEMLFGYEWELHQSPAGAWQWHPKDVKAEHMIPDAHVPGRSAPPMMTTADLSLRFDPVYEPIARRFLGDPQAFGNAF AQAWFKLTHRDLGPRSCYLGADVPEAVMSWQDPLPTTSHPTIDAPAVDALKQELLNTGLSHGELISTAWASAASFRQSDR RGGANGARLRLQPQCNWELNNPEQLKRVLSVLEAVQMRFNQQHQGGMQVSLADLIVLSGSAAVEQAMAATGQRCRVRFTP GRVDASAEQTDNASFNALKPIADGFRNYLRSDLPLKAEQLLVDRAQQLHLSAPEMTALIGGFRVLGLNWDGSDIGVFTSR PGQFSNDFFVNLLDMSTQWSPVEGHSNLYQGIDTETKQPRWRASRVDLVFGSHAQLRAIAEVYGQAGGSARLAADFSAAW SKVMELDRFDLL >Mature_731_residues SMAEMRCPFSGHGAATTPASATTNQHWWPEQINLGLLHQHNPAANPLGSNFDYRQAFNSLDLNAVKADLMALMTDSQSWW PADWGHYGGLFIRMAWHSAGTYRLADGRGGAGHGNQRFAPLNSWPDNTNLDKARRLLWPIKAKYGSNLSWADLIILAGNC ALESMGLPTAGFAGGREDIWEPEDDIYWGSETSWLSDERHDNDGAIESPLAATEMGLIYVNPEGPHGEPDPVASGREVRD TFARMGMNNEETVALVAGGHTFGKAHGAAPSAHLGADPEGAALEQLGLGWQNTYASGCGADTITSGIEGAWKPNPTRWDQ GYFEMLFGYEWELHQSPAGAWQWHPKDVKAEHMIPDAHVPGRSAPPMMTTADLSLRFDPVYEPIARRFLGDPQAFGNAFA QAWFKLTHRDLGPRSCYLGADVPEAVMSWQDPLPTTSHPTIDAPAVDALKQELLNTGLSHGELISTAWASAASFRQSDRR GGANGARLRLQPQCNWELNNPEQLKRVLSVLEAVQMRFNQQHQGGMQVSLADLIVLSGSAAVEQAMAATGQRCRVRFTPG RVDASAEQTDNASFNALKPIADGFRNYLRSDLPLKAEQLLVDRAQQLHLSAPEMTALIGGFRVLGLNWDGSDIGVFTSRP GQFSNDFFVNLLDMSTQWSPVEGHSNLYQGIDTETKQPRWRASRVDLVFGSHAQLRAIAEVYGQAGGSARLAADFSAAWS KVMELDRFDLL
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily
Homologues:
Organism=Escherichia coli, GI1790378, Length=732, Percent_Identity=55.8743169398907, Blast_Score=790, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KATG_SYNR3 (A5GTX8)
Other databases:
- EMBL: CT978603 - RefSeq: YP_001227690.1 - ProteinModelPortal: A5GTX8 - SMR: A5GTX8 - STRING: A5GTX8 - PeroxiBase: 6243 - GeneID: 5158398 - GenomeReviews: CT978603_GR - KEGG: syr:SynRCC307_1434 - eggNOG: COG0376 - HOGENOM: HBG285610 - OMA: FEWELTK - ProtClustDB: PRK15061 - HAMAP: MF_01961 - InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 - PRINTS: PR00460 - PRINTS: PR00458 - TIGRFAMs: TIGR00198
Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super
EC number: =1.11.1.6; =1.11.1.7
Molecular weight: Translated: 80124; Mature: 79993
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4
Important sites: ACT_SITE 98-98
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMAEMRCPFSGHGAATTPASATTNQHWWPEQINLGLLHQHNPAANPLGSNFDYRQAFNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCHHHHHCC LDLNAVKADLMALMTDSQSWWPADWGHYGGLFIRMAWHSAGTYRLADGRGGAGHGNQRFA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC PLNSWPDNTNLDKARRLLWPIKAKYGSNLSWADLIILAGNCALESMGLPTAGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHCCCCCCCCCCCCCCC WEPEDDIYWGSETSWLSDERHDNDGAIESPLAATEMGLIYVNPEGPHGEPDPVASGREVR CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCHHHH DTFARMGMNNEETVALVAGGHTFGKAHGAAPSAHLGADPEGAALEQLGLGWQNTYASGCG HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC ADTITSGIEGAWKPNPTRWDQGYFEMLFGYEWELHQSPAGAWQWHPKDVKAEHMIPDAHV HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCC PGRSAPPMMTTADLSLRFDPVYEPIARRFLGDPQAFGNAFAQAWFKLTHRDLGPRSCYLG CCCCCCCCEEEECCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEC ADVPEAVMSWQDPLPTTSHPTIDAPAVDALKQELLNTGLSHGELISTAWASAASFRQSDR CCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RGGANGARLRLQPQCNWELNNPEQLKRVLSVLEAVQMRFNQQHQGGMQVSLADLIVLSGS CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEHEEEECCC AAVEQAMAATGQRCRVRFTPGRVDASAEQTDNASFNALKPIADGFRNYLRSDLPLKAEQL HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH LVDRAQQLHLSAPEMTALIGGFRVLGLNWDGSDIGVFTSRPGQFSNDFFVNLLDMSTQWS HHHHHHHHCCCCCHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCC PVEGHSNLYQGIDTETKQPRWRASRVDLVFGSHAQLRAIAEVYGQAGGSARLAADFSAAW CCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHH SKVMELDRFDLL HHHHHHHHHCCC >Mature Secondary Structure SMAEMRCPFSGHGAATTPASATTNQHWWPEQINLGLLHQHNPAANPLGSNFDYRQAFNS CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCHHHHHCC LDLNAVKADLMALMTDSQSWWPADWGHYGGLFIRMAWHSAGTYRLADGRGGAGHGNQRFA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCC PLNSWPDNTNLDKARRLLWPIKAKYGSNLSWADLIILAGNCALESMGLPTAGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHCCCCCCCCCCCCCCC WEPEDDIYWGSETSWLSDERHDNDGAIESPLAATEMGLIYVNPEGPHGEPDPVASGREVR CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCHHHH DTFARMGMNNEETVALVAGGHTFGKAHGAAPSAHLGADPEGAALEQLGLGWQNTYASGCG HHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC ADTITSGIEGAWKPNPTRWDQGYFEMLFGYEWELHQSPAGAWQWHPKDVKAEHMIPDAHV HHHHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCC PGRSAPPMMTTADLSLRFDPVYEPIARRFLGDPQAFGNAFAQAWFKLTHRDLGPRSCYLG CCCCCCCCEEEECCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEC ADVPEAVMSWQDPLPTTSHPTIDAPAVDALKQELLNTGLSHGELISTAWASAASFRQSDR CCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RGGANGARLRLQPQCNWELNNPEQLKRVLSVLEAVQMRFNQQHQGGMQVSLADLIVLSGS CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCEEEEEHEEEECCC AAVEQAMAATGQRCRVRFTPGRVDASAEQTDNASFNALKPIADGFRNYLRSDLPLKAEQL HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH LVDRAQQLHLSAPEMTALIGGFRVLGLNWDGSDIGVFTSRPGQFSNDFFVNLLDMSTQWS HHHHHHHHCCCCCHHHHHHCCEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCC PVEGHSNLYQGIDTETKQPRWRASRVDLVFGSHAQLRAIAEVYGQAGGSARLAADFSAAW CCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEHHHHHHH SKVMELDRFDLL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA