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The map label for this gene is clpS [H]

Identifier: 148242507

GI number: 148242507

Start: 1252537

End: 1252833

Strand: Direct

Name: clpS [H]

Synonym: SynRCC307_1408

Alternate gene names: 148242507

Gene position: 1252537-1252833 (Clockwise)

Preceding gene: 148242504

Following gene: 148242508

Centisome position: 56.3

GC content: 60.94

Gene sequence:

>297_bases
TTGACCAGCTCAGCTCCCAGCCGCCAAACAGCCGGCAGCACCCTGCTGGAGCGGGCTCCCTATCCCAATTTCAAGGTGGT
GGTCCTCAACGATGAGGTGAACACCTTCCAGCACGTGGTGGATTGCCTGGTGAAGTACATCCCTGCCATGGATCCCGACC
GCGCCTGGTCATTAGCTCAGCAGATCGATAGCGATGGCCAAGCCGTGGTTTGGGTGGGTCCGCAGGAGCAAGCCGAGCTA
TATCACATGCAATTGGGCGCTGAGGGCCTGACCATGGCCCCACTGGAGCGGGCCTGA

Upstream 100 bases:

>100_bases
CCCAAGGAGATCAGCACTGGACAGTCGATCAAACGTGCTGACTGTACTGAAAGCTGGAGGGGTGATTGCGCAGAATGGCG
CAGTTGGTAGGAATTCAGCA

Downstream 100 bases:

>100_bases
GGCCATGGGACGGGTGGTGATCACCCACAGCACCTACCTCGAAGGATTGATCCCGCTGCTCAAGCAATTGGCCAAGGATC
CCCAAGTGGTGACGGTGACA

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTSSAPSRQTAGSTLLERAPYPNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQQIDSDGQAVVWVGPQEQAEL
YHMQLGAEGLTMAPLERA

Sequences:

>Translated_98_residues
MTSSAPSRQTAGSTLLERAPYPNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQQIDSDGQAVVWVGPQEQAEL
YHMQLGAEGLTMAPLERA
>Mature_97_residues
TSSAPSRQTAGSTLLERAPYPNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQQIDSDGQAVVWVGPQEQAELY
HMQLGAEGLTMAPLERA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 10801; Mature: 10670

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSAPSRQTAGSTLLERAPYPNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQ
CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QIDSDGQAVVWVGPQEQAELYHMQLGAEGLTMAPLERA
HHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSSAPSRQTAGSTLLERAPYPNFKVVVLNDEVNTFQHVVDCLVKYIPAMDPDRAWSLAQ
CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
QIDSDGQAVVWVGPQEQAELYHMQLGAEGLTMAPLERA
HHCCCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]