| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is pstC [H]
Identifier: 148242462
GI number: 148242462
Start: 1209803
End: 1210759
Strand: Direct
Name: pstC [H]
Synonym: SynRCC307_1363
Alternate gene names: 148242462
Gene position: 1209803-1210759 (Clockwise)
Preceding gene: 148242461
Following gene: 148242463
Centisome position: 54.38
GC content: 53.19
Gene sequence:
>957_bases ATGTCAGCCTCCGGGCAAAGCAGTCTCTACAAGCTGCGTCACCGTCCTCCCAGCGACAAGCTGGTGGACAACGGATTCAA AAACCTTGTCGTTCTTCTGGCTCTGATGGTGGCGATCATCTTGATCGGCATTTTTATCGTTGTTGGAAGCCAAGCGGCGG AAGCGATCAAAGCCTTTGGGCTCAATTTTGTATTCAGCTCCAAATGGGACCCGGTTAGGGACACCTATGGAGCCTTCACG GCGATCTATGGGACCCTGCTGACGTCACTCCTGGCTTTGGTCTTGGCCGTGCCGTTGGGAGTGGGCACAGCCATCTTCCT CACCGAAGATTTCATCAACGGCAAAGTCCGTGAGGTGATTTCAAACATGGTGGAATTGCTGGCAGCCATTCCATCGGTGG TTTTAGGGCTCTGGGCAATCTTTGTTCTTGAACCCTTTGTCCGGCCAATCCTGATGGCCATCCATAACGTTCTTGGCTGG ATCCCCTTTTTCAGCACCGTTCCATCGGGCCCCGGTGTGATGCCAGCGGTCTTCATTCTGACGATCATGTTGCTGCCGAT CATCACAGCGATCAGCCGCGATTCTCTCAATCAGGTTCCCCAAGATCTGCGCCAAGCCGCCTATGGCATCGGCGCCACAC GTTGGACATCGATCTTGCGCGTTCTGGTTCCAGCCGCCATTTCAGGGATTATCGGCGGAATCATGTTGGCCCTCGGTCGA GCCATGGGTGAAACGATGGCCGTCACGATGATCATTGGCAACCAAACCTCTTTCAACATCTCTTGGTTTGCGCCAGGAAA CACCATTGCTTCTTTGATTGCCAATCAATTTGGAGAAGCCGGTGAACTTCAGATGTCAGCACTGATGTATGCCGCATTGG TGTTGATGATCATCACGTTCCTCGTCAATGTTCTGGCGCAGTGGATTGTCAGGCGCTTGGCCCTCAAATACGAGTGA
Upstream 100 bases:
>100_bases ATTTCATCGCAAGAGGGGGCTAAGCCCCCTCTTTTTTTGTGGGAATTTAATGAGTCCCTAAGCATCACTGCGTATCTTTG AATTGACTGTGACGAGTGCA
Downstream 100 bases:
>100_bases TCCAATGACCTCATCAAGCTTTAAAGCCAAAGGCGACTTGCTGTTCAAGCCAGGCCTGCTTCGCAATCAGGGCAACCGAT TGATGACGAGCATCGCTGCG
Product: ABC-type phosphate transport system permease component
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSASGQSSLYKLRHRPPSDKLVDNGFKNLVVLLALMVAIILIGIFIVVGSQAAEAIKAFGLNFVFSSKWDPVRDTYGAFT AIYGTLLTSLLALVLAVPLGVGTAIFLTEDFINGKVREVISNMVELLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGW IPFFSTVPSGPGVMPAVFILTIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIMLALGR AMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVLMIITFLVNVLAQWIVRRLALKYE
Sequences:
>Translated_318_residues MSASGQSSLYKLRHRPPSDKLVDNGFKNLVVLLALMVAIILIGIFIVVGSQAAEAIKAFGLNFVFSSKWDPVRDTYGAFT AIYGTLLTSLLALVLAVPLGVGTAIFLTEDFINGKVREVISNMVELLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGW IPFFSTVPSGPGVMPAVFILTIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIMLALGR AMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVLMIITFLVNVLAQWIVRRLALKYE >Mature_317_residues SASGQSSLYKLRHRPPSDKLVDNGFKNLVVLLALMVAIILIGIFIVVGSQAAEAIKAFGLNFVFSSKWDPVRDTYGAFTA IYGTLLTSLLALVLAVPLGVGTAIFLTEDFINGKVREVISNMVELLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGWI PFFSTVPSGPGVMPAVFILTIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIMLALGRA MGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVLMIITFLVNVLAQWIVRRLALKYE
Specific function: Part of a binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=311, Percent_Identity=43.0868167202572, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1790163, Length=189, Percent_Identity=30.6878306878307, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34249; Mature: 34118
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASGQSSLYKLRHRPPSDKLVDNGFKNLVVLLALMVAIILIGIFIVVGSQAAEAIKAFG CCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC LNFVFSSKWDPVRDTYGAFTAIYGTLLTSLLALVLAVPLGVGTAIFLTEDFINGKVREVI CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH SNMVELLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGWIPFFSTVPSGPGVMPAVFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIMLALGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVLMIITF HHCHHHEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LVNVLAQWIVRRLALKYE HHHHHHHHHHHHHHHCCC >Mature Secondary Structure SASGQSSLYKLRHRPPSDKLVDNGFKNLVVLLALMVAIILIGIFIVVGSQAAEAIKAFG CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC LNFVFSSKWDPVRDTYGAFTAIYGTLLTSLLALVLAVPLGVGTAIFLTEDFINGKVREVI CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH SNMVELLAAIPSVVLGLWAIFVLEPFVRPILMAIHNVLGWIPFFSTVPSGPGVMPAVFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH TIMLLPIITAISRDSLNQVPQDLRQAAYGIGATRWTSILRVLVPAAISGIIGGIMLALGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMGETMAVTMIIGNQTSFNISWFAPGNTIASLIANQFGEAGELQMSALMYAALVLMIITF HHCHHHEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LVNVLAQWIVRRLALKYE HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]