| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is pstS [H]
Identifier: 148242461
GI number: 148242461
Start: 1208694
End: 1209680
Strand: Direct
Name: pstS [H]
Synonym: SynRCC307_1362
Alternate gene names: 148242461
Gene position: 1208694-1209680 (Clockwise)
Preceding gene: 148242460
Following gene: 148242462
Centisome position: 54.33
GC content: 59.47
Gene sequence:
>987_bases ATGCCCGTCACCAAAAAGGCTGTTGCTCTGAGCTCCCTTGTCGCTCTGAGTGCTGCCGCCATCGCCCCCGCTATCGCTCA GCAATCCCTGAACGGTGCAGGTGCTTCTTTCCCGGCTCCTCTCTATCAAAAGTGGTTCCAGGAATTGGCTGCTGCCGGCG GCCCCAAGGTCAACTACCAAGCTGTTGGATCCGGCGCTGGCGTACGCCAGATGATCGCTGGCACCTCCGACTTCGGTGCA TCTGACAAGCCCCTGGGCGCTAAAAAGCGCGACAAGATCAAACGCGGCGTGATCCAGATCCCTATGACTGGGGGCACGAT CGCCGTTGGCTACAACAAGCCAGGCTGCACTCTCAAGCTCACCCAAAAGCAGGTGGCCGAGATCTTCCTGGGCAAGATCA CCGACTACAGCCAACTCGGTTGTGCTGCTGGTCCGATCACCGTGGCTTACCGCTCTGACGGTTCCGGCACCACCTTCGCC TTCACCAACGCCGTTGCCGCCTGGAATGGCGACTTCAAAGACACCATCGGCGTTGGCAAATCCGTCAACTGGCCCGTGGG CTCCGGCGGTAAGGGCAACAGCGGCGTCGCCGGCGTCATCCAAAACACCCCTGGTGGTTTGGGTTATGTGAACCAGGCCT ACGTCAAAGGCAAGATCAAGGCTGCTGCCATCCAGAACAAGGACGGCAACTACGTCAAGCCCACCTCCAAGAACGGTTCG GCTGGCCTGGCTGGCATCAAGCTTGATGCTTACAACACCGGCACCGACACCAATCCCTCCGGCGCCAATGCCTATCCAAT CAGCACCCTGACCTGGATCTTGGCTTACGCCAGCGGCAACGGTGACAACACCCCCGCCCTCAAGAAGACCTTTGCTTACA TGCTGAGCAACAAGGCCCAAAGCCAGGCACCGAGCCTGGGTTATGTGCCCCTGCCCTCCAGCATCCGCAAGATCTCCTTG GCAGCCGTTCAGAAAATCGCTGACTGA
Upstream 100 bases:
>100_bases GAGTAAAGCCTTAATTTCCCTGTAACCATTGATACAAAAGAGATAACTGGTCCTTAAGGGATGCCTCGTATCAAAGACAT TGACGTCTCGCAGGCAACCC
Downstream 100 bases:
>100_bases TCCAAGCGTCAGGACCTAGCGAATTTCATCGCAAGAGGGGGCTAAGCCCCCTCTTTTTTTGTGGGAATTTAATGAGTCCC TAAGCATCACTGCGTATCTT
Product: ABC-type phosphate transport system, substrate binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPVTKKAVALSSLVALSAAAIAPAIAQQSLNGAGASFPAPLYQKWFQELAAAGGPKVNYQAVGSGAGVRQMIAGTSDFGA SDKPLGAKKRDKIKRGVIQIPMTGGTIAVGYNKPGCTLKLTQKQVAEIFLGKITDYSQLGCAAGPITVAYRSDGSGTTFA FTNAVAAWNGDFKDTIGVGKSVNWPVGSGGKGNSGVAGVIQNTPGGLGYVNQAYVKGKIKAAAIQNKDGNYVKPTSKNGS AGLAGIKLDAYNTGTDTNPSGANAYPISTLTWILAYASGNGDNTPALKKTFAYMLSNKAQSQAPSLGYVPLPSSIRKISL AAVQKIAD
Sequences:
>Translated_328_residues MPVTKKAVALSSLVALSAAAIAPAIAQQSLNGAGASFPAPLYQKWFQELAAAGGPKVNYQAVGSGAGVRQMIAGTSDFGA SDKPLGAKKRDKIKRGVIQIPMTGGTIAVGYNKPGCTLKLTQKQVAEIFLGKITDYSQLGCAAGPITVAYRSDGSGTTFA FTNAVAAWNGDFKDTIGVGKSVNWPVGSGGKGNSGVAGVIQNTPGGLGYVNQAYVKGKIKAAAIQNKDGNYVKPTSKNGS AGLAGIKLDAYNTGTDTNPSGANAYPISTLTWILAYASGNGDNTPALKKTFAYMLSNKAQSQAPSLGYVPLPSSIRKISL AAVQKIAD >Mature_327_residues PVTKKAVALSSLVALSAAAIAPAIAQQSLNGAGASFPAPLYQKWFQELAAAGGPKVNYQAVGSGAGVRQMIAGTSDFGAS DKPLGAKKRDKIKRGVIQIPMTGGTIAVGYNKPGCTLKLTQKQVAEIFLGKITDYSQLGCAAGPITVAYRSDGSGTTFAF TNAVAAWNGDFKDTIGVGKSVNWPVGSGGKGNSGVAGVIQNTPGGLGYVNQAYVKGKIKAAAIQNKDGNYVKPTSKNGSA GLAGIKLDAYNTGTDTNPSGANAYPISTLTWILAYASGNGDNTPALKKTFAYMLSNKAQSQAPSLGYVPLPSSIRKISLA AVQKIAD
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=336, Percent_Identity=36.9047619047619, Blast_Score=186, Evalue=2e-48,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 33483; Mature: 33352
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTKKAVALSSLVALSAAAIAPAIAQQSLNGAGASFPAPLYQKWFQELAAAGGPKVNYQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE AVGSGAGVRQMIAGTSDFGASDKPLGAKKRDKIKRGVIQIPMTGGTIAVGYNKPGCTLKL EECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCCEEEE TQKQVAEIFLGKITDYSQLGCAAGPITVAYRSDGSGTTFAFTNAVAAWNGDFKDTIGVGK CHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCEEEEECEEEECCCCCHHHHCCCC SVNWPVGSGGKGNSGVAGVIQNTPGGLGYVNQAYVKGKIKAAAIQNKDGNYVKPTSKNGS CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEEECCCCCEECCCCCCCC AGLAGIKLDAYNTGTDTNPSGANAYPISTLTWILAYASGNGDNTPALKKTFAYMLSNKAQ CCEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH SQAPSLGYVPLPSSIRKISLAAVQKIAD HCCCCCCEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PVTKKAVALSSLVALSAAAIAPAIAQQSLNGAGASFPAPLYQKWFQELAAAGGPKVNYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE AVGSGAGVRQMIAGTSDFGASDKPLGAKKRDKIKRGVIQIPMTGGTIAVGYNKPGCTLKL EECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCCEEEE TQKQVAEIFLGKITDYSQLGCAAGPITVAYRSDGSGTTFAFTNAVAAWNGDFKDTIGVGK CHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCCCEEEEECEEEECCCCCHHHHCCCC SVNWPVGSGGKGNSGVAGVIQNTPGGLGYVNQAYVKGKIKAAAIQNKDGNYVKPTSKNGS CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCEEEEEEEECCCCCEECCCCCCCC AGLAGIKLDAYNTGTDTNPSGANAYPISTLTWILAYASGNGDNTPALKKTFAYMLSNKAQ CCEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH SQAPSLGYVPLPSSIRKISLAAVQKIAD HCCCCCCEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]