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The map label for this gene is selU [H]

Identifier: 148242402

GI number: 148242402

Start: 1155702

End: 1156760

Strand: Direct

Name: selU [H]

Synonym: SynRCC307_1303

Alternate gene names: 148242402

Gene position: 1155702-1156760 (Clockwise)

Preceding gene: 148242399

Following gene: 148242403

Centisome position: 51.94

GC content: 62.42

Gene sequence:

>1059_bases
ATGGCGGATGGGGCCAGTCGCCAGTATCGCAGTGCAGCCATGACCAACCGGCTTGCCATCGACAGCTTGATGCATTCACC
CGGTGCTCTGGTGGATGTGCGCAGCCCCAGTGAATTCGCCAAAGCGCACTGGCCTGGCGCTGTGAATCTGCCCCTCTTTG
ATGACGAGGGGCGCGCTGAGGTGGGCACCCTGTACAAGCAAAAAGGTCGTCAGCAGGCCATCCAACGGGGATTGGAACTG
GTGGGTCCCCAGCTCGCTGCCATGGGCCACAAGCTGCAGCAGATCGCCCAGCAAGGTCCCGGTTCCTTGCGCATCTACTG
CTGGCGCGGCGGCATGCGCAGCGCCAGCGTCGCCTGGCTGGCCTCCACCCTGGATATCGATGTCGTGGTGCTCGAGGGCG
GCTACAAGAGCTTTCGGCGCTGGGTACTCGGCCAATTCGAGAGGCCCTGGCCGGTTCAACTGCTCGGAGGCGGCACCGGC
AGCGGAAAAACCGACGTTTTGTTGGCCCTAGCCCAACAGGGCGGGGCCATGGTGGATCTCGAGGGGCTGGCGCATCACCG
CGGCAGCAGCTTTGGCGGGCTGGGGCAGCCCGAACAACCCAGCACGGAGATGTTTGAAAACGAGCTCGCTCTGGCGCTGG
TGGCTCTAGAGGGCCAAGCGCCTCTGTGGCTTGAGGCCGAAAGCGTTCAAATCGGCCGTTGCCGCCTACCCAACGGGCTC
TGGCAGCAAATGCAGCAGGCACCTGTGGTGGTGTTGGAGCGGCCGCAGAAGGAACGGATTGATGCGCTGGTGGCCCTCTA
CGGCGCCGAAGCCCATGGAGGATTGCTGGAAGCCACCCAGCGATTACAACGGCGACTTGGACCGCAACGAACGAAAGACG
CCACCGACAGCATCCGATCTGGAGATCTCAGCAGCGCTTGCGCGGTGATTCTTGATTACTACGACCGCTGCTACAGCTAT
GAGCTGAATCGGCGCTCAACTCCCATCACCAGGTTGGCGGTTGAGGGCTTAAGTGCGTCTGCCGTGGCACACCAGCTATT
GCAGCTGAAATCTGCGTAA

Upstream 100 bases:

>100_bases
GCGGCTATTGCCTTTGAGGAACTCTTGCAACAGTGCGGCCGGTTCAACAACGGCCTGCTCCGAACCTCCGGAAGCAGCAG
ATGAGGGTGAACCAGACAAC

Downstream 100 bases:

>100_bases
GCTCTCCCTCTTTCGGGGCAGTAAGCGATGGGCGCAGCCATTCAGTTTTTCCGTGGCGTTGACGAGCCCGTTATTCCCGA
CATCAAGTTGACCCGCTCGC

Product: ATPase

Products: NA

Alternate protein names: Selenophosphate-dependent tRNA 2-selenouridine synthase [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MADGASRQYRSAAMTNRLAIDSLMHSPGALVDVRSPSEFAKAHWPGAVNLPLFDDEGRAEVGTLYKQKGRQQAIQRGLEL
VGPQLAAMGHKLQQIAQQGPGSLRIYCWRGGMRSASVAWLASTLDIDVVVLEGGYKSFRRWVLGQFERPWPVQLLGGGTG
SGKTDVLLALAQQGGAMVDLEGLAHHRGSSFGGLGQPEQPSTEMFENELALALVALEGQAPLWLEAESVQIGRCRLPNGL
WQQMQQAPVVVLERPQKERIDALVALYGAEAHGGLLEATQRLQRRLGPQRTKDATDSIRSGDLSSACAVILDYYDRCYSY
ELNRRSTPITRLAVEGLSASAVAHQLLQLKSA

Sequences:

>Translated_352_residues
MADGASRQYRSAAMTNRLAIDSLMHSPGALVDVRSPSEFAKAHWPGAVNLPLFDDEGRAEVGTLYKQKGRQQAIQRGLEL
VGPQLAAMGHKLQQIAQQGPGSLRIYCWRGGMRSASVAWLASTLDIDVVVLEGGYKSFRRWVLGQFERPWPVQLLGGGTG
SGKTDVLLALAQQGGAMVDLEGLAHHRGSSFGGLGQPEQPSTEMFENELALALVALEGQAPLWLEAESVQIGRCRLPNGL
WQQMQQAPVVVLERPQKERIDALVALYGAEAHGGLLEATQRLQRRLGPQRTKDATDSIRSGDLSSACAVILDYYDRCYSY
ELNRRSTPITRLAVEGLSASAVAHQLLQLKSA
>Mature_351_residues
ADGASRQYRSAAMTNRLAIDSLMHSPGALVDVRSPSEFAKAHWPGAVNLPLFDDEGRAEVGTLYKQKGRQQAIQRGLELV
GPQLAAMGHKLQQIAQQGPGSLRIYCWRGGMRSASVAWLASTLDIDVVVLEGGYKSFRRWVLGQFERPWPVQLLGGGTGS
GKTDVLLALAQQGGAMVDLEGLAHHRGSSFGGLGQPEQPSTEMFENELALALVALEGQAPLWLEAESVQIGRCRLPNGLW
QQMQQAPVVVLERPQKERIDALVALYGAEAHGGLLEATQRLQRRLGPQRTKDATDSIRSGDLSSACAVILDYYDRCYSYE
LNRRSTPITRLAVEGLSASAVAHQLLQLKSA

Specific function: Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA [H]

COG id: COG2603

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1786712, Length=345, Percent_Identity=34.7826086956522, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR017582 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 38248; Mature: 38117

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: PS50206 RHODANESE_3 ; PS00227 TUBULIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGASRQYRSAAMTNRLAIDSLMHSPGALVDVRSPSEFAKAHWPGAVNLPLFDDEGRAE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCEECCCCCHH
VGTLYKQKGRQQAIQRGLELVGPQLAAMGHKLQQIAQQGPGSLRIYCWRGGMRSASVAWL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH
ASTLDIDVVVLEGGYKSFRRWVLGQFERPWPVQLLGGGTGSGKTDVLLALAQQGGAMVDL
HHHCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE
EGLAHHRGSSFGGLGQPEQPSTEMFENELALALVALEGQAPLWLEAESVQIGRCRLPNGL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEEEECCEEECCEECCHHH
WQQMQQAPVVVLERPQKERIDALVALYGAEAHGGLLEATQRLQRRLGPQRTKDATDSIRS
HHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCC
GDLSSACAVILDYYDRCYSYELNRRSTPITRLAVEGLSASAVAHQLLQLKSA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADGASRQYRSAAMTNRLAIDSLMHSPGALVDVRSPSEFAKAHWPGAVNLPLFDDEGRAE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHCCCCCCCCCEECCCCCHH
VGTLYKQKGRQQAIQRGLELVGPQLAAMGHKLQQIAQQGPGSLRIYCWRGGMRSASVAWL
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHH
ASTLDIDVVVLEGGYKSFRRWVLGQFERPWPVQLLGGGTGSGKTDVLLALAQQGGAMVDL
HHHCCEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEE
EGLAHHRGSSFGGLGQPEQPSTEMFENELALALVALEGQAPLWLEAESVQIGRCRLPNGL
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEEEECCEEECCEECCHHH
WQQMQQAPVVVLERPQKERIDALVALYGAEAHGGLLEATQRLQRRLGPQRTKDATDSIRS
HHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCC
GDLSSACAVILDYYDRCYSYELNRRSTPITRLAVEGLSASAVAHQLLQLKSA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA