Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is pbpG [H]

Identifier: 148242389

GI number: 148242389

Start: 1143391

End: 1145517

Strand: Direct

Name: pbpG [H]

Synonym: SynRCC307_1290

Alternate gene names: 148242389

Gene position: 1143391-1145517 (Clockwise)

Preceding gene: 148242388

Following gene: 148242390

Centisome position: 51.39

GC content: 62.2

Gene sequence:

>2127_bases
ATGAGCCCATTCCTACGCCTTCACATCAACGGTGAACCCAGCAGGGAGATCCAGCTGCTGGGGGAGGTGTATCGACTGGG
GCGCGATCCCGACGCCGAAATCGTGATCCAGCACCCTGCGATCAGCAAGCGCCATGCCTTGCTGGAGCGCCGCCATGGCC
ACTGGCAGCTCAGGGACCAAGGCTCCACCAATGGCTTGAGCTGGAAGGGCCGATCGGTGCAGCTCTTGGCCCTACGCGAT
GGGGATCGCATTCGCCTCGGACCAGAGGCTGATCCATCGCTACCGGTGCTGGAGTTCCTTGAGCCCAGCTCCCGCCGTCA
ATGGCTCCCCTGGAAGAAGGCACTCAGTTCAGGCCTATTGAGCCTGGCCGGGGCTGGTCTGTTGGTGCTCGGTTTCGGGG
CCGTCAGCGTGCCTGTGCGCGGCAGTTTGGCTCCAGTGCGCGGGCCCTTGGTGCTCTACGACCGCAGCGGCACACCGATT
AACAGTGGCTTTGATACGAACCACCGCGAAAAGGAGCGTGTTGCCGATTTCGCGCCACCGCTTCGGGCGGCTTTGCTTTC
AAGCGAAGACACCCGCTTCTGGTGGCATCCAGGGGTCGATCCGATTGGCATCACCCGTGCCTTGCTCGTCAACATTGCTG
GCGGCCAAGTGCTGGAGGGCGGCAGCACCCTCACCCAACAGCTGGCCCGGAGCCTCTATCCCAACGAGGTGGGCGAGGGC
GACACGCTGCAGCGCAAATGGAATGAACTGCTGGTCGCGTTGCAATTGGAAGCGCGCTTCAGCAAGCAAACGCTGCTGTT
GAGCTACCTCAATCGGGTGTATCTCGGCGTCGGGTGGGGCTTTGAAGATGCCGCGCAGGCCTACTTCAACCACTCAGCCA
GTGCGTTGACCTTGCCGCAGGCGGCGCTGCTAGTGGGGCTACTGCCATCGCCCAATGGCCACGACCCCTGCCGCTATCCG
GAAGCTGCGCTGGCGGCACGCAATGGTGTGCTCAACAAAATGGTGCGGGAAGGTCGCCTCTCGGCTGATCAAGGACGCAT
CGCGCGGCGAACTCCGATTCAACTGGCGCCTGAAGCCTGCACCGGTGTCGCCCGCAGACCAGCTCCCTTCTACAGCGATC
AAGTGGAGCGCGATCTGCAGAAGCTCGTTGGTGACGATGTGGCCGCTGAGGGGAACTTCATCGTGGAAACCCATCTCGAC
CCAACGCTGCAAGAGGTCGTTGAAGTGACACTGCAGCGATTTCTACGAGCCAACAGCACCAGCGGCATCAACCAAGGGGC
CGTTGTGGTGCTCGATAGCCGCACCGGCGGAATCCTCAGCCTGGTGGGGGGGCGCGACTACAGCACCAGCCAATACAACC
GAGCCAGCCAAGCCCTGAGGCAGCCCGGAAGCGTGTTCAAACTCTTCCCTTATTTAGTGGCCATAGATCGAGGCGTTAGG
CCAACAACACCTGTCTCGGCATCGCCAATCGAGTGGGGAGGCCTGCGTTACAGCCAAGGTTGCCGCGGCAGCAGCAGCCT
GCAGCAGGCCTTCGCATCCAGCGACAACTGTGCTGCCTTGCATCTGGCACGCCGCTACAGCCTTGACGCTGTGGTTCGCA
AAGCACGCGACTTCGGCATCACGACACCGATGGCAGCGGTCCCGGGTTTGGTGCTTGGGCAATCAGAAACACTGTTGCTG
GAGCTCACGGCGGCCTATGCGGCCGTGGCCAATGGGGGCATCTGGACCTCACCGAGCACGATTCGCCGACTGACTGACAC
CGAAACCTGTCCACTCGATCCCAGCGATTGTGCCCAGCGCTCCCTGGCCAGCCAACGCAGCCGCCGAGTCTTGCCCACCG
ATCAAGCCTTGGTGATGCAAACACTGTTGCGATCGGTGATCCAATCCGGCACGGGCCGTGCTGCCTACCTGGGTGGCAAC
GAGGGAGGAAAAACCGGAACGACGAATGAAGGTCGCGATTTGACCTTTATTGGCTACGAACCCAAGCGCCATTGGGTCAT
GGGCGTTTGGCTAGGCAATGACGACAACAGCCCCACGGGCCAAACCAGCGCCGCCGCTGCTGGTCTGTGGTGGGAGATCA
TGCGCACTGCAGGCCAGGGCACTGCTGATGCGGAGGGCCGGCCATGA

Upstream 100 bases:

>100_bases
GCCTTGAACTGGTGCCATTCTCATTTCCCGTCTTCAATTTGGCCGACGTTGCGATCAACTTGGCCGTGTTGTGTCTGTTG
ATCGAAGCCATCCGCCAGCG

Downstream 100 bases:

>100_bases
AACGCACGCGCCTCTGGCTGATTCTTGGCGGTCTGCTGGTGGTGGTTGTGGTGCTGTCGATCGTGATGCAAGCGATCAAC
AGCTTGATTTGGCAGTTGAG

Product: glycosyltransferase

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 708; Mature: 707

Protein sequence:

>708_residues
MSPFLRLHINGEPSREIQLLGEVYRLGRDPDAEIVIQHPAISKRHALLERRHGHWQLRDQGSTNGLSWKGRSVQLLALRD
GDRIRLGPEADPSLPVLEFLEPSSRRQWLPWKKALSSGLLSLAGAGLLVLGFGAVSVPVRGSLAPVRGPLVLYDRSGTPI
NSGFDTNHREKERVADFAPPLRAALLSSEDTRFWWHPGVDPIGITRALLVNIAGGQVLEGGSTLTQQLARSLYPNEVGEG
DTLQRKWNELLVALQLEARFSKQTLLLSYLNRVYLGVGWGFEDAAQAYFNHSASALTLPQAALLVGLLPSPNGHDPCRYP
EAALAARNGVLNKMVREGRLSADQGRIARRTPIQLAPEACTGVARRPAPFYSDQVERDLQKLVGDDVAAEGNFIVETHLD
PTLQEVVEVTLQRFLRANSTSGINQGAVVVLDSRTGGILSLVGGRDYSTSQYNRASQALRQPGSVFKLFPYLVAIDRGVR
PTTPVSASPIEWGGLRYSQGCRGSSSLQQAFASSDNCAALHLARRYSLDAVVRKARDFGITTPMAAVPGLVLGQSETLLL
ELTAAYAAVANGGIWTSPSTIRRLTDTETCPLDPSDCAQRSLASQRSRRVLPTDQALVMQTLLRSVIQSGTGRAAYLGGN
EGGKTGTTNEGRDLTFIGYEPKRHWVMGVWLGNDDNSPTGQTSAAAAGLWWEIMRTAGQGTADAEGRP

Sequences:

>Translated_708_residues
MSPFLRLHINGEPSREIQLLGEVYRLGRDPDAEIVIQHPAISKRHALLERRHGHWQLRDQGSTNGLSWKGRSVQLLALRD
GDRIRLGPEADPSLPVLEFLEPSSRRQWLPWKKALSSGLLSLAGAGLLVLGFGAVSVPVRGSLAPVRGPLVLYDRSGTPI
NSGFDTNHREKERVADFAPPLRAALLSSEDTRFWWHPGVDPIGITRALLVNIAGGQVLEGGSTLTQQLARSLYPNEVGEG
DTLQRKWNELLVALQLEARFSKQTLLLSYLNRVYLGVGWGFEDAAQAYFNHSASALTLPQAALLVGLLPSPNGHDPCRYP
EAALAARNGVLNKMVREGRLSADQGRIARRTPIQLAPEACTGVARRPAPFYSDQVERDLQKLVGDDVAAEGNFIVETHLD
PTLQEVVEVTLQRFLRANSTSGINQGAVVVLDSRTGGILSLVGGRDYSTSQYNRASQALRQPGSVFKLFPYLVAIDRGVR
PTTPVSASPIEWGGLRYSQGCRGSSSLQQAFASSDNCAALHLARRYSLDAVVRKARDFGITTPMAAVPGLVLGQSETLLL
ELTAAYAAVANGGIWTSPSTIRRLTDTETCPLDPSDCAQRSLASQRSRRVLPTDQALVMQTLLRSVIQSGTGRAAYLGGN
EGGKTGTTNEGRDLTFIGYEPKRHWVMGVWLGNDDNSPTGQTSAAAAGLWWEIMRTAGQGTADAEGRP
>Mature_707_residues
SPFLRLHINGEPSREIQLLGEVYRLGRDPDAEIVIQHPAISKRHALLERRHGHWQLRDQGSTNGLSWKGRSVQLLALRDG
DRIRLGPEADPSLPVLEFLEPSSRRQWLPWKKALSSGLLSLAGAGLLVLGFGAVSVPVRGSLAPVRGPLVLYDRSGTPIN
SGFDTNHREKERVADFAPPLRAALLSSEDTRFWWHPGVDPIGITRALLVNIAGGQVLEGGSTLTQQLARSLYPNEVGEGD
TLQRKWNELLVALQLEARFSKQTLLLSYLNRVYLGVGWGFEDAAQAYFNHSASALTLPQAALLVGLLPSPNGHDPCRYPE
AALAARNGVLNKMVREGRLSADQGRIARRTPIQLAPEACTGVARRPAPFYSDQVERDLQKLVGDDVAAEGNFIVETHLDP
TLQEVVEVTLQRFLRANSTSGINQGAVVVLDSRTGGILSLVGGRDYSTSQYNRASQALRQPGSVFKLFPYLVAIDRGVRP
TTPVSASPIEWGGLRYSQGCRGSSSLQQAFASSDNCAALHLARRYSLDAVVRKARDFGITTPMAAVPGLVLGQSETLLLE
LTAAYAAVANGGIWTSPSTIRRLTDTETCPLDPSDCAQRSLASQRSRRVLPTDQALVMQTLLRSVIQSGTGRAAYLGGNE
GGKTGTTNEGRDLTFIGYEPKRHWVMGVWLGNDDNSPTGQTSAAAAGLWWEIMRTAGQGTADAEGRP

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI1786343, Length=537, Percent_Identity=30.1675977653631, Blast_Score=177, Evalue=3e-45,
Organism=Escherichia coli, GI1788867, Length=550, Percent_Identity=31.0909090909091, Blast_Score=173, Evalue=3e-44,
Organism=Escherichia coli, GI87082258, Length=257, Percent_Identity=33.852140077821, Blast_Score=130, Evalue=3e-31,
Organism=Escherichia coli, GI1789601, Length=173, Percent_Identity=34.1040462427746, Blast_Score=77, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.1.129; 3.4.-.- [C]

Molecular weight: Translated: 76766; Mature: 76635

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPFLRLHINGEPSREIQLLGEVYRLGRDPDAEIVIQHPAISKRHALLERRHGHWQLRDQ
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC
GSTNGLSWKGRSVQLLALRDGDRIRLGPEADPSLPVLEFLEPSSRRQWLPWKKALSSGLL
CCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
SLAGAGLLVLGFGAVSVPVRGSLAPVRGPLVLYDRSGTPINSGFDTNHREKERVADFAPP
HHHCCCEEEEECCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCH
LRAALLSSEDTRFWWHPGVDPIGITRALLVNIAGGQVLEGGSTLTQQLARSLYPNEVGEG
HHHHHHCCCCCEEEECCCCCHHHHHHHHHEECCCCCEECCCHHHHHHHHHHCCCCCCCCC
DTLQRKWNELLVALQLEARFSKQTLLLSYLNRVYLGVGWGFEDAAQAYFNHSASALTLPQ
HHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCH
AALLVGLLPSPNGHDPCRYPEAALAARNGVLNKMVREGRLSADQGRIARRTPIQLAPEAC
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCHHH
TGVARRPAPFYSDQVERDLQKLVGDDVAAEGNFIVETHLDPTLQEVVEVTLQRFLRANST
HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
SGINQGAVVVLDSRTGGILSLVGGRDYSTSQYNRASQALRQPGSVFKLFPYLVAIDRGVR
CCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PTTPVSASPIEWGGLRYSQGCRGSSSLQQAFASSDNCAALHLARRYSLDAVVRKARDFGI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TTPMAAVPGLVLGQSETLLLELTAAYAAVANGGIWTSPSTIRRLTDTETCPLDPSDCAQR
CCCHHHCCCEEECCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
SLASQRSRRVLPTDQALVMQTLLRSVIQSGTGRAAYLGGNEGGKTGTTNEGRDLTFIGYE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC
PKRHWVMGVWLGNDDNSPTGQTSAAAAGLWWEIMRTAGQGTADAEGRP
CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SPFLRLHINGEPSREIQLLGEVYRLGRDPDAEIVIQHPAISKRHALLERRHGHWQLRDQ
CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECC
GSTNGLSWKGRSVQLLALRDGDRIRLGPEADPSLPVLEFLEPSSRRQWLPWKKALSSGLL
CCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH
SLAGAGLLVLGFGAVSVPVRGSLAPVRGPLVLYDRSGTPINSGFDTNHREKERVADFAPP
HHHCCCEEEEECCEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCH
LRAALLSSEDTRFWWHPGVDPIGITRALLVNIAGGQVLEGGSTLTQQLARSLYPNEVGEG
HHHHHHCCCCCEEEECCCCCHHHHHHHHHEECCCCCEECCCHHHHHHHHHHCCCCCCCCC
DTLQRKWNELLVALQLEARFSKQTLLLSYLNRVYLGVGWGFEDAAQAYFNHSASALTLPQ
HHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCCCCEEECCH
AALLVGLLPSPNGHDPCRYPEAALAARNGVLNKMVREGRLSADQGRIARRTPIQLAPEAC
HHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCHHH
TGVARRPAPFYSDQVERDLQKLVGDDVAAEGNFIVETHLDPTLQEVVEVTLQRFLRANST
HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
SGINQGAVVVLDSRTGGILSLVGGRDYSTSQYNRASQALRQPGSVFKLFPYLVAIDRGVR
CCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PTTPVSASPIEWGGLRYSQGCRGSSSLQQAFASSDNCAALHLARRYSLDAVVRKARDFGI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
TTPMAAVPGLVLGQSETLLLELTAAYAAVANGGIWTSPSTIRRLTDTETCPLDPSDCAQR
CCCHHHCCCEEECCCCEEEEEHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
SLASQRSRRVLPTDQALVMQTLLRSVIQSGTGRAAYLGGNEGGKTGTTNEGRDLTFIGYE
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC
PKRHWVMGVWLGNDDNSPTGQTSAAAAGLWWEIMRTAGQGTADAEGRP
CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]