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The map label for this gene is chlP [H]

Identifier: 148242366

GI number: 148242366

Start: 1121538

End: 1122941

Strand: Direct

Name: chlP [H]

Synonym: SynRCC307_1267

Alternate gene names: 148242366

Gene position: 1121538-1122941 (Clockwise)

Preceding gene: 148242356

Following gene: 148242368

Centisome position: 50.41

GC content: 59.9

Gene sequence:

>1404_bases
ATGTTGCGTGTTGCCGTTGTCGGCGGAGGGCCCAGTGGCTCCTGTGCTGCAGAAGTTTTGGCGAAAGCAGGAATTCAGAC
CTGGATCTTTGAGCGCAAGCTCGACAACGCCAAGCCCTGCGGTGGCGCCATTCCCCTCTGCATGGTCGAAGAGTTCGACC
TTCCCGAGAACATCATCGACCGCAAGGTCCGCAATATGCGGATGATCTCCCCCTCCAACCGTGAAGTGGAGATCAATCTC
GACAACGAGAACGAATACATCGGGATGTGCCGCCGGGAAGTGATGGATTCCTTCCTGCGCAACCGAGCCGCCGACCTCGG
AGCCAACCTGATCAATGGCCTGGTCACCAAGATCGAGACCGGGCCCAAGCGCCAAGGGCCTTACACCCTCCAGTACACCG
ATTACAGCGATGGCGCAGCCACCGGTACCGCCAAGAGCCTTGAGGTGGATCTGATCATTGGCGCTGATGGTGCCAACAGC
CGCGTCGCCAAAGCCATGGATGCTGGCGACTACAACGTGGCCATCGCCTTTCAAGAGCGGATCAAGCTCCCTGCCGAAGA
GATGAGCTACTACGAGAACTTGGCCGAGATGTATGTCGGCACCGATGTCTCGCCTGACTTCTACGCCTGGGTGTTCCCCA
AATACGACCACGTGGCTGTCGGCACCGGCACCATGCAGGAAAACCAAGCCCTGATCAAAGACTTACAAGTCGGCATCCGT
CAGCGAGCCCGCAAGCGCTTGATCAAAGGTGAAGTGATCAAGGTGGAAGCTCATCCAATTCCCGAGCACCCCCGCCCCCG
CCGCGTGGTCGGCGGTATGGCGCTGGTGGGCGATGCCGCTGGGTATGTCACCAAGAGCTCAGGCGAAGGGATTTACTTCG
CTGCCAAAAGCGGGCGCATGTGCGCTGAAGAAATCGTGGCCGCCAGCGGCAGCGGTCAGCGCGTTCCTACCGAGAAGGAT
CTCAAGGGCTACCTGCGCAAATGGGACCGCAAGTACGGCGCCACCTACAAGGTGCTGGAACTCCTGCAAAACATCTTCTA
CCGGAACGATGCAGCCCGCGAAGCCTTCGTTGAGATGTGCGATGACAAGGATGTTCAACGGCTCACCTTCGACAGCTACC
TGTACAAGCGGGTGGTGACCATGAACCCCTGGCAGCAACTGAAACTCACCTTCCTCACCGTTGGTGCTGTGCTGCGCGGG
AACGCCCTGGCACCAGGCACTTACAAGGCAGTGCCCAGTGCTGTGCGGAGCGAAGATGAAGCCGATCGTTTGCTGGCAGA
AGGTGGCATCCGCGGCGGATTGAAGGCTGGCCGCGAAGCCGCTGCGCAAGCCGAAGCTGCAGCGGAGTCGCAAGCCGACG
CCAAGGCCCCAACTGAAGAGCGCGACGTGGTGCTCAGCCGCTAA

Upstream 100 bases:

>100_bases
AATTGTCAGATCCTAGTCGCAGGAATGGATTTCACCAGCATTCAACCGGCTTGCAGTGTTAGTTTCAAAGAACTGTCTGT
GCCCACCCGGGATCCCAGGA

Downstream 100 bases:

>100_bases
TTGCGGCGAAATCAGCCAACACCGCCGCCTGGTTGCCCAACACGGCCAGCAGGTTCAGGCGGTTGCGGCGCACCGCCATG
TCATCAGCCATCACCATCAC

Product: geranylgeranyl hydrogenase

Products: NA

Alternate protein names: Geranylgeranyl reductase [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIIDRKVRNMRMISPSNREVEINL
DNENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIETGPKRQGPYTLQYTDYSDGAATGTAKSLEVDLIIGADGANS
RVAKAMDAGDYNVAIAFQERIKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVGIR
QRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEEIVAASGSGQRVPTEKD
LKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVEMCDDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRG
NALAPGTYKAVPSAVRSEDEADRLLAEGGIRGGLKAGREAAAQAEAAAESQADAKAPTEERDVVLSR

Sequences:

>Translated_467_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIIDRKVRNMRMISPSNREVEINL
DNENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIETGPKRQGPYTLQYTDYSDGAATGTAKSLEVDLIIGADGANS
RVAKAMDAGDYNVAIAFQERIKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVGIR
QRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEEIVAASGSGQRVPTEKD
LKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVEMCDDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRG
NALAPGTYKAVPSAVRSEDEADRLLAEGGIRGGLKAGREAAAQAEAAAESQADAKAPTEERDVVLSR
>Mature_467_residues
MLRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIIDRKVRNMRMISPSNREVEINL
DNENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIETGPKRQGPYTLQYTDYSDGAATGTAKSLEVDLIIGADGANS
RVAKAMDAGDYNVAIAFQERIKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVGIR
QRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSGRMCAEEIVAASGSGQRVPTEKD
LKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVEMCDDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRG
NALAPGTYKAVPSAVRSEDEADRLLAEGGIRGGLKAGREAAAQAEAAAESQADAKAPTEERDVVLSR

Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during chlorophyll A (ChlA) biosynthesis [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010253
- InterPro:   IPR011774
- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR016040
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.3.1.83 [H]

Molecular weight: Translated: 51253; Mature: 51253

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIID
CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
RKVRNMRMISPSNREVEINLDNENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIET
HHHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPKRQGPYTLQYTDYSDGAATGTAKSLEVDLIIGADGANSRVAKAMDAGDYNVAIAFQER
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEHHH
IKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVGIR
HCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHH
QRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSGRM
HHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEECCCCCCEECCCCCEEEEEECCCCH
CAEEIVAASGSGQRVPTEKDLKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVEMC
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHH
DDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRGNALAPGTYKAVPSAVRSEDE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH
ADRLLAEGGIRGGLKAGREAAAQAEAAAESQADAKAPTEERDVVLSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MLRVAVVGGGPSGSCAAEVLAKAGIQTWIFERKLDNAKPCGGAIPLCMVEEFDLPENIID
CEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHH
RKVRNMRMISPSNREVEINLDNENEYIGMCRREVMDSFLRNRAADLGANLINGLVTKIET
HHHHHEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GPKRQGPYTLQYTDYSDGAATGTAKSLEVDLIIGADGANSRVAKAMDAGDYNVAIAFQER
CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEEEEHHH
IKLPAEEMSYYENLAEMYVGTDVSPDFYAWVFPKYDHVAVGTGTMQENQALIKDLQVGIR
HCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHH
QRARKRLIKGEVIKVEAHPIPEHPRPRRVVGGMALVGDAAGYVTKSSGEGIYFAAKSGRM
HHHHHHHHCCCEEEEECCCCCCCCCCCHHHCCCCEECCCCCCEECCCCCEEEEEECCCCH
CAEEIVAASGSGQRVPTEKDLKGYLRKWDRKYGATYKVLELLQNIFYRNDAAREAFVEMC
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHH
DDKDVQRLTFDSYLYKRVVTMNPWQQLKLTFLTVGAVLRGNALAPGTYKAVPSAVRSEDE
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHH
ADRLLAEGGIRGGLKAGREAAAQAEAAAESQADAKAPTEERDVVLSR
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8766814; 8905231 [H]