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The map label for this gene is sbcC

Identifier: 148242264

GI number: 148242264

Start: 1029458

End: 1032019

Strand: Direct

Name: sbcC

Synonym: SynRCC307_1165

Alternate gene names: NA

Gene position: 1029458-1032019 (Clockwise)

Preceding gene: 148242263

Following gene: 148242270

Centisome position: 46.27

GC content: 61.12

Gene sequence:

>2562_bases
ATGCAGTTGCTTCAGATCACCCTTGAGCATGTGCGCCTGCACCGGCAGTTGAACCTGCCGCTGGCCAGTGGCATCACGGT
CCTTGAGGGGGCCAACGAATCGGGCAAGAGCACCTTGGCTGAGGCCATACATCGGGCGCTGTTTTTGCCAGCGCGCACTG
CCGGGGCTGCTTTGAACCAACTCCGCACACGCCCCTTTGAGGCCGATCCCACCATCAGCCTGCAGTTCAGTGCAGATGGC
AACACCTACCAGCTGCGCAAAACCTTCGCGGGAAGCCGCGGCAGCGTCAGCCTCAGCGACGCCGCCGGCAACGTTCTGGA
AGGGGAACGGGCTGAAGAGCGCCTGGCCCAGTTGGTCGGCGCATCAGCCGTTCGTGGCGGCAATCTCGGACGTTTGCGCG
AGCGTTGGGCTCACCTTTGGGTGTGGCAAGGGCAGGCAGGTGTTGATCCCCTGAGCCTGGCTCCGGCCACGATTGATCAA
GAGCGCTTGCTCCAACAGCTCCAGCATCAAGCCCAAACCATCCAATCAGGCTTTGATCAGCAGATTCAACAGGCGATTCG
CCAGCGTTGGTCCCTCAGCTACACCGATGGTGGACGCGAAGGGCGTGCGGGCTCTGAACTTGATCGTGCGCTGAAAGCGG
AAGCCAAGGCCGCTGAAAACCTCAGCCAATTGGAGCAGGACGAGCAAGCGCAGCAGCAGGCCCAGCGGGATTTTGCTGAA
GCATCGAGTGCATTGCAGGCCCTCGATGCCCAGTTGCCATTGCTCAAGCAACGTCAACAGCTCCAGGACCAACAGCAGCG
CGTGCAAGAGCAGTTGTCGCAATGGCAACCCGTGTTGCAGCGCGGCGAGCAAGCAGCCGAACACCTTCAGAAGCTGTGGC
AGTCACTTGCTCCAGCGCAAGCGCAGCTCGAGGCACTGCAACAACGCCTGCCAGAGACCGAGCTCAGCTTTAAAGCCGCC
AGCGAAGCATTGGATCAAGCCATCGCTCAGGCGGAAACCTTGCAGCAGTGGATGCGCTTTTTGCAGTTGCAACAGCAGGC
TGATCAGCTGCAAGCGCTGGCCATCCGCAGCGCTGAGCTCAAGCAGAGAGCCGAGCAGCTACCAGCCCTGGAGCCGGCGG
ATCTTGAGTCTCTGCAACAGCTCGAGCGTTCACGTCAGGATGCGGCCGTTGCCTTGGCGTGCCTCAGCACGGGCCTCGAG
CTCACAGCCACCGATCAAGCCCTGTTGCTCAACGACCAACCGCTTCGGGCAGGGGATGCGCTCGATCTGGATCAAGACGC
TGAATTGCGCTCGGCTTCAGGTGGCTTTGTGTTGCAGATTCGTCCTGGCGGTGCCGGTCGCTTGAACCAGCTGCGCCAAA
CCAAGGCCCTGTTGGACCAGCAGCTTTCAGCAGCGCTGCAGCGCTGGAACCTGCCGGATGTGAAGGCCGCCAAAGCTTCC
GAGCGCGAACGACGCGAGTTGATCGCTGAATGGCGCCAACTCCGCTCCCAACAGGGAGCGATTGCCGTGGATCAGCTACG
CCAACAGATCGCTGCCTTGCCAGAACCGCCAAAGGATGCCGATCTGAGCCAACTGCGGGAGCAGCTGGATGCCCTGGTGC
CCCAAGGCAAAGCGTTGCGGCTACAGCGCAATCAAGCCGAGGCCGATCTCAGCCAGCAGCGCCAGCAGTTGGAGCAATTG
CAGGCCTCCTGCCAGAGCGACTTGCAACATCAGACCCGGGCGCAAACCGTGCTGGAGGAAGTGCAACAAAGCCATGGTGG
ATTAGAGAGCTTTCGGCAGCAGGTCTCTCGTCTGCAGCAGGAGCTCAAGCAGGGTCAGCAGCAGCTGCAACGGCTCGATG
AGCAATTGCAACGTCAGGGTGTGCACCGTCTTGATGGCGTGAGCCCTGTTGCGGTTCAACACCAGCGTGATCAATGGCTG
CAGCAACGGGCCGCTAGCCGTGCCCTCTTGGAAAGCCAAGGGGAGCGGGGCTTACAGGAACAACTGGAGATGGCCCGGGC
TGATCTCGAGGATTGCGCCTCACAGCGCCAAAGCCTGCAGGATGAAGCTCGGATGCTGAATCTTCTGCTCCAAACTTTTG
AGCAGGAGCAGGCCCAGCTTTCTGAGAGCTACAGCGCTCCTTTGGCCGACTCCCTTGAGGCCTATCTGCGTTGTTTCACC
AAGGCCCCATCACGGCTTGGCCTGCGGTTTGATCCGCGCCAAGGTTTTGTTGATCTCGATTGGCAGCGGGAGTCAGGCGT
TGCTTGGGGATTCGACGATCTCAGCGGCGGAACACGGGAGCTCTTGGCTGCTGCTGTGCGCATGGCGATGGCAGAGGTGT
TGGCACCTGCCTACGACGGCGTCTTGCCGGTGCTTTTCGACGATGCCTTCACCAATGTCGACCCCAGCCGCTGGTCTGCC
CTCAACGCCATGTTCCAACGCGCCCGGGAGCGAGGCGTTCAGGTGTTGCTGCTCAGCTGTGATCCAAATTTCAGTGCTGC
CATTCAGCCGGATGTGCTGCACCAGCTGCCGCTGCGGACGGCATCGCCAACAGCGCTCCATCGGCGCCGTAGTGCCGCTT
AA

Upstream 100 bases:

>100_bases
TGAAAGAGCAGAGCCTCCAACAGGACAATGCCGAAGAATCGCGCTTGGCCGTTCTGGCCTTGCGGGAGTTGCAACTGCTG
GCATCCCAGGAGATCTGACC

Downstream 100 bases:

>100_bases
TAGCCAGCCAGGTTCCATTGGTTTGTTGCCATTGCAGTGAACAGTTGCGGCCATCCAGCAGCATCTGTAGATCTGGTTGC
AAGCTCCAGCAGTGGCGATC

Product: putative DNA repair ATPase

Products: NA

Alternate protein names: SMC Domain-Containing Protein; RecF ProteinABC Transporter; ATPase; RecF/RecN/SMC Domain-Containing Protein; ATPase Involved In DNA Repair-Like

Number of amino acids: Translated: 853; Mature: 853

Protein sequence:

>853_residues
MQLLQITLEHVRLHRQLNLPLASGITVLEGANESGKSTLAEAIHRALFLPARTAGAALNQLRTRPFEADPTISLQFSADG
NTYQLRKTFAGSRGSVSLSDAAGNVLEGERAEERLAQLVGASAVRGGNLGRLRERWAHLWVWQGQAGVDPLSLAPATIDQ
ERLLQQLQHQAQTIQSGFDQQIQQAIRQRWSLSYTDGGREGRAGSELDRALKAEAKAAENLSQLEQDEQAQQQAQRDFAE
ASSALQALDAQLPLLKQRQQLQDQQQRVQEQLSQWQPVLQRGEQAAEHLQKLWQSLAPAQAQLEALQQRLPETELSFKAA
SEALDQAIAQAETLQQWMRFLQLQQQADQLQALAIRSAELKQRAEQLPALEPADLESLQQLERSRQDAAVALACLSTGLE
LTATDQALLLNDQPLRAGDALDLDQDAELRSASGGFVLQIRPGGAGRLNQLRQTKALLDQQLSAALQRWNLPDVKAAKAS
ERERRELIAEWRQLRSQQGAIAVDQLRQQIAALPEPPKDADLSQLREQLDALVPQGKALRLQRNQAEADLSQQRQQLEQL
QASCQSDLQHQTRAQTVLEEVQQSHGGLESFRQQVSRLQQELKQGQQQLQRLDEQLQRQGVHRLDGVSPVAVQHQRDQWL
QQRAASRALLESQGERGLQEQLEMARADLEDCASQRQSLQDEARMLNLLLQTFEQEQAQLSESYSAPLADSLEAYLRCFT
KAPSRLGLRFDPRQGFVDLDWQRESGVAWGFDDLSGGTRELLAAAVRMAMAEVLAPAYDGVLPVLFDDAFTNVDPSRWSA
LNAMFQRARERGVQVLLLSCDPNFSAAIQPDVLHQLPLRTASPTALHRRRSAA

Sequences:

>Translated_853_residues
MQLLQITLEHVRLHRQLNLPLASGITVLEGANESGKSTLAEAIHRALFLPARTAGAALNQLRTRPFEADPTISLQFSADG
NTYQLRKTFAGSRGSVSLSDAAGNVLEGERAEERLAQLVGASAVRGGNLGRLRERWAHLWVWQGQAGVDPLSLAPATIDQ
ERLLQQLQHQAQTIQSGFDQQIQQAIRQRWSLSYTDGGREGRAGSELDRALKAEAKAAENLSQLEQDEQAQQQAQRDFAE
ASSALQALDAQLPLLKQRQQLQDQQQRVQEQLSQWQPVLQRGEQAAEHLQKLWQSLAPAQAQLEALQQRLPETELSFKAA
SEALDQAIAQAETLQQWMRFLQLQQQADQLQALAIRSAELKQRAEQLPALEPADLESLQQLERSRQDAAVALACLSTGLE
LTATDQALLLNDQPLRAGDALDLDQDAELRSASGGFVLQIRPGGAGRLNQLRQTKALLDQQLSAALQRWNLPDVKAAKAS
ERERRELIAEWRQLRSQQGAIAVDQLRQQIAALPEPPKDADLSQLREQLDALVPQGKALRLQRNQAEADLSQQRQQLEQL
QASCQSDLQHQTRAQTVLEEVQQSHGGLESFRQQVSRLQQELKQGQQQLQRLDEQLQRQGVHRLDGVSPVAVQHQRDQWL
QQRAASRALLESQGERGLQEQLEMARADLEDCASQRQSLQDEARMLNLLLQTFEQEQAQLSESYSAPLADSLEAYLRCFT
KAPSRLGLRFDPRQGFVDLDWQRESGVAWGFDDLSGGTRELLAAAVRMAMAEVLAPAYDGVLPVLFDDAFTNVDPSRWSA
LNAMFQRARERGVQVLLLSCDPNFSAAIQPDVLHQLPLRTASPTALHRRRSAA
>Mature_853_residues
MQLLQITLEHVRLHRQLNLPLASGITVLEGANESGKSTLAEAIHRALFLPARTAGAALNQLRTRPFEADPTISLQFSADG
NTYQLRKTFAGSRGSVSLSDAAGNVLEGERAEERLAQLVGASAVRGGNLGRLRERWAHLWVWQGQAGVDPLSLAPATIDQ
ERLLQQLQHQAQTIQSGFDQQIQQAIRQRWSLSYTDGGREGRAGSELDRALKAEAKAAENLSQLEQDEQAQQQAQRDFAE
ASSALQALDAQLPLLKQRQQLQDQQQRVQEQLSQWQPVLQRGEQAAEHLQKLWQSLAPAQAQLEALQQRLPETELSFKAA
SEALDQAIAQAETLQQWMRFLQLQQQADQLQALAIRSAELKQRAEQLPALEPADLESLQQLERSRQDAAVALACLSTGLE
LTATDQALLLNDQPLRAGDALDLDQDAELRSASGGFVLQIRPGGAGRLNQLRQTKALLDQQLSAALQRWNLPDVKAAKAS
ERERRELIAEWRQLRSQQGAIAVDQLRQQIAALPEPPKDADLSQLREQLDALVPQGKALRLQRNQAEADLSQQRQQLEQL
QASCQSDLQHQTRAQTVLEEVQQSHGGLESFRQQVSRLQQELKQGQQQLQRLDEQLQRQGVHRLDGVSPVAVQHQRDQWL
QQRAASRALLESQGERGLQEQLEMARADLEDCASQRQSLQDEARMLNLLLQTFEQEQAQLSESYSAPLADSLEAYLRCFT
KAPSRLGLRFDPRQGFVDLDWQRESGVAWGFDDLSGGTRELLAAAVRMAMAEVLAPAYDGVLPVLFDDAFTNVDPSRWSA
LNAMFQRARERGVQVLLLSCDPNFSAAIQPDVLHQLPLRTASPTALHRRRSAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95061; Mature: 95061

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLQITLEHVRLHRQLNLPLASGITVLEGANESGKSTLAEAIHRALFLPARTAGAALNQ
CHHHHHHHHHHHHHHHHCCCHHHCCHHEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LRTRPFEADPTISLQFSADGNTYQLRKTFAGSRGSVSLSDAAGNVLEGERAEERLAQLVG
HHCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHH
ASAVRGGNLGRLRERWAHLWVWQGQAGVDPLSLAPATIDQERLLQQLQHQAQTIQSGFDQ
HHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QIQQAIRQRWSLSYTDGGREGRAGSELDRALKAEAKAAENLSQLEQDEQAQQQAQRDFAE
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSALQALDAQLPLLKQRQQLQDQQQRVQEQLSQWQPVLQRGEQAAEHLQKLWQSLAPAQ
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AQLEALQQRLPETELSFKAASEALDQAIAQAETLQQWMRFLQLQQQADQLQALAIRSAEL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRAEQLPALEPADLESLQQLERSRQDAAVALACLSTGLELTATDQALLLNDQPLRAGDA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCC
LDLDQDAELRSASGGFVLQIRPGGAGRLNQLRQTKALLDQQLSAALQRWNLPDVKAAKAS
CCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ERERRELIAEWRQLRSQQGAIAVDQLRQQIAALPEPPKDADLSQLREQLDALVPQGKALR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHH
LQRNQAEADLSQQRQQLEQLQASCQSDLQHQTRAQTVLEEVQQSHGGLESFRQQVSRLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELKQGQQQLQRLDEQLQRQGVHRLDGVSPVAVQHQRDQWLQQRAASRALLESQGERGLQE
HHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QLEMARADLEDCASQRQSLQDEARMLNLLLQTFEQEQAQLSESYSAPLADSLEAYLRCFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAPSRLGLRFDPRQGFVDLDWQRESGVAWGFDDLSGGTRELLAAAVRMAMAEVLAPAYDG
HCHHHCCCEECCCCCCEECCCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
VLPVLFDDAFTNVDPSRWSALNAMFQRARERGVQVLLLSCDPNFSAAIQPDVLHQLPLRT
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCC
ASPTALHRRRSAA
CCCHHHHHHHCCC
>Mature Secondary Structure
MQLLQITLEHVRLHRQLNLPLASGITVLEGANESGKSTLAEAIHRALFLPARTAGAALNQ
CHHHHHHHHHHHHHHHHCCCHHHCCHHEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
LRTRPFEADPTISLQFSADGNTYQLRKTFAGSRGSVSLSDAAGNVLEGERAEERLAQLVG
HHCCCCCCCCCEEEEECCCCCEEEHHHHHCCCCCCEEEHHHCCCCCCCHHHHHHHHHHHH
ASAVRGGNLGRLRERWAHLWVWQGQAGVDPLSLAPATIDQERLLQQLQHQAQTIQSGFDQ
HHHHCCCCHHHHHHHHHHHEEECCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QIQQAIRQRWSLSYTDGGREGRAGSELDRALKAEAKAAENLSQLEQDEQAQQQAQRDFAE
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSALQALDAQLPLLKQRQQLQDQQQRVQEQLSQWQPVLQRGEQAAEHLQKLWQSLAPAQ
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AQLEALQQRLPETELSFKAASEALDQAIAQAETLQQWMRFLQLQQQADQLQALAIRSAEL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQRAEQLPALEPADLESLQQLERSRQDAAVALACLSTGLELTATDQALLLNDQPLRAGDA
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCCC
LDLDQDAELRSASGGFVLQIRPGGAGRLNQLRQTKALLDQQLSAALQRWNLPDVKAAKAS
CCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ERERRELIAEWRQLRSQQGAIAVDQLRQQIAALPEPPKDADLSQLREQLDALVPQGKALR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHH
LQRNQAEADLSQQRQQLEQLQASCQSDLQHQTRAQTVLEEVQQSHGGLESFRQQVSRLQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELKQGQQQLQRLDEQLQRQGVHRLDGVSPVAVQHQRDQWLQQRAASRALLESQGERGLQE
HHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QLEMARADLEDCASQRQSLQDEARMLNLLLQTFEQEQAQLSESYSAPLADSLEAYLRCFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAPSRLGLRFDPRQGFVDLDWQRESGVAWGFDDLSGGTRELLAAAVRMAMAEVLAPAYDG
HCHHHCCCEECCCCCCEECCCCCCCCCEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
VLPVLFDDAFTNVDPSRWSALNAMFQRARERGVQVLLLSCDPNFSAAIQPDVLHQLPLRT
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCCCCC
ASPTALHRRRSAA
CCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA