| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148242110
Identifier: 148242110
GI number: 148242110
Start: 924100
End: 925020
Strand: Direct
Name: 148242110
Synonym: SynRCC307_1011
Alternate gene names: NA
Gene position: 924100-925020 (Clockwise)
Preceding gene: 148242105
Following gene: 148242112
Centisome position: 41.53
GC content: 62.65
Gene sequence:
>921_bases ATGGAAATCCTGATGATGGGCGGCACCCGCTTTGTTGGCCGGCCGCTGGTGGGTCATTTGTTGCGCTCTGGTCACCAGGT CTGCCTGTTCACCCGCGGTAAGCAGCCCCTGCCCGAGGGGGTGGAACACATCCGTGGCGATCGCAGTGATGCTGAGGGCT TGGCAGCTCTCAAGGGCCGCCAGTTCGATGTGATCGTCGACAGCTCTGGCCGCACCCTGACGGATACGCAAAGCGTTGTG GCCATCACAGGCGCCCCGCGCCATCGCCTCGTCTATGTGAGCTCAGCTGGCGTGTATGCCGACAACGCCCGCTTGCCGCT CGATGAGTCGGCTCCCACCGACCCGGCCAGCCGCCACGCTGGTAAGGCGGAAACCGAAACCTGGTTGCAGGCCGAAGGCA TTCCCTTCACCAGCTTTCGCCCGACCTACATCTACGGGCCTGGGAACTACAACCCCGTCGAGAACTGGTTTTTTGATCGC ATCGTGCACGGACGCCCTGTGCCCATCCCCGGTGATGGAACCACCATCACCCAGCTCGGCCATGTGGAGGATCTGGCTAC CGCCATGGCCCGTTGCCTCGAGGTCGATGCTGCCGCTAATCGCATCTACAACTGCACCGATACCCATGGGGTGACGTTCC GCGGTCTGGTGGCTGCTGCTGCGCGCGCCTGCGGCAAAGATCCAGAGCAGGTGGAGCTGCGCAGCTTTGATCCCAGCGGC CTCGATCCCAAAGCCCGCAAAGCGTTCCCGCTGCGGTTGACCCACTTTCTGACCTCAGTGGAGCGTTTGCGCAAGGAATT GGCCTGGACGCCACAGTTTGATCTCGAGGCCGGTTTGCGCGATAGCTACAGCAAAGACCACAGCCAGCGGCCCGCCGCTG ATGTGGATTTCAGCCGCGACGACAGCTTGTTTCAGGCCTGA
Upstream 100 bases:
>100_bases TCGATGGCGGGAATGATCTGCATGGGGCAGGGCGATCACTGCCGCCATCCTCACCAACGGCCGTCAGCGCAGAATGCTGC GGCATCGCAGCGGGAGAACG
Downstream 100 bases:
>100_bases CGCGCGTAGCCAACCGCTGACCACAGGGCAAGGACCAGCGAGGGCCAGAACAGCCACCAACCCAGGCTTTGCAGCCCAGC AGCCCATGGCCAGGTCGCTG
Product: NAD dependent epimerase/dehydratase
Products: NA
Alternate protein names: Reductase; UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Isoflavone Reductase; Nucleotide Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Oxidoreductase; DTDP-Glucose 4 6-Dehydratase; NAD Dependent Epimerase/Dehydratase; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NDP-Sugar Oxidoreductase; Nucleotide Sugar Epimerase/Dehydratase; Methyltransferase FkbM; Sugar Dehydratase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA
Sequences:
>Translated_306_residues MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA >Mature_306_residues MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGRQFDVIVDSSGRTLTDTQSVV AITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHAGKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDR IVHGRPVPIPGDGTTITQLGHVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRDDSLFQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33598; Mature: 33598
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGR CEEEEECCCHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHCCC QFDVIVDSSGRTLTDTQSVVAITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHA EEEEEECCCCCEEECCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCHHHHCC GKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIPGDGTTITQLG CCCHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHC HVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRD CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC DSLFQA CHHHCC >Mature Secondary Structure MEILMMGGTRFVGRPLVGHLLRSGHQVCLFTRGKQPLPEGVEHIRGDRSDAEGLAALKGR CEEEEECCCHHHCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHCCC QFDVIVDSSGRTLTDTQSVVAITGAPRHRLVYVSSAGVYADNARLPLDESAPTDPASRHA EEEEEECCCCCEEECCCCEEEEECCCCEEEEEEECCCEEECCCCCCCCCCCCCCHHHHCC GKAETETWLQAEGIPFTSFRPTYIYGPGNYNPVENWFFDRIVHGRPVPIPGDGTTITQLG CCCHHHHHHEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEHHC HVEDLATAMARCLEVDAAANRIYNCTDTHGVTFRGLVAAAARACGKDPEQVELRSFDPSG CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC LDPKARKAFPLRLTHFLTSVERLRKELAWTPQFDLEAGLRDSYSKDHSQRPAADVDFSRD CCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC DSLFQA CHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA