| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is 148242059
Identifier: 148242059
GI number: 148242059
Start: 881610
End: 882053
Strand: Direct
Name: 148242059
Synonym: SynRCC307_0960
Alternate gene names: NA
Gene position: 881610-882053 (Clockwise)
Preceding gene: 148242053
Following gene: 148242060
Centisome position: 39.62
GC content: 59.91
Gene sequence:
>444_bases ATGCACCGAAAGCTGCTGCCACTGCTGTTGCTGCTACTGGCGGCCACCACGCCGGCGTTGGCGCAGGATCCCCAAGCCGT GCAGCGCCATCGTCAGAGGATGTTGGAGCTCTTCCATCGCCTCGATCACGACAACGACGGTCGCCTGTATTTGCGAGAGG CTGGTCTGCACCCGAGCATGCGCAACCTCGACCGCGATGGTGATGGCATCTTGTTGCTGAGAGACATCACACCGCCAGGC GCACCATTCATTGGCGAGCGCCTGTTGCAGGCTTTTCGCCGCTCTGATCGCAATGGTGATGGCCTGTTGAGCAGGGCTGA ATCACAGGTTTTGCCTGGCTTGAGTCATCGTTTTGAGCATTTCGATCGCAATCGTGATGGCTACGTCTCGGTTCAGGAGT TGATGGCGATGCGTCAGTCGCTCTCGCCGCGCCGTCCCCGCTAG
Upstream 100 bases:
>100_bases CTTTCCAAGACTGGTTTCAGTTGGATTCCGTCACAGGTTGGTGTCAAAAAGATCCTGCATAGGAAGAATTGATTGGGAGT TGGCTCCATAAGGTGTGGCT
Downstream 100 bases:
>100_bases CGATGGACCGCGACCTGCGCCAGCAGTTGATGGATCAAGCCCGGGCTGAGGCGGAATTGGGCTGGGCCGAAGGTGGCATT CCAATTGGAGCGGTGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MHRKLLPLLLLLLAATTPALAQDPQAVQRHRQRMLELFHRLDHDNDGRLYLREAGLHPSMRNLDRDGDGILLLRDITPPG APFIGERLLQAFRRSDRNGDGLLSRAESQVLPGLSHRFEHFDRNRDGYVSVQELMAMRQSLSPRRPR
Sequences:
>Translated_147_residues MHRKLLPLLLLLLAATTPALAQDPQAVQRHRQRMLELFHRLDHDNDGRLYLREAGLHPSMRNLDRDGDGILLLRDITPPG APFIGERLLQAFRRSDRNGDGLLSRAESQVLPGLSHRFEHFDRNRDGYVSVQELMAMRQSLSPRRPR >Mature_147_residues MHRKLLPLLLLLLAATTPALAQDPQAVQRHRQRMLELFHRLDHDNDGRLYLREAGLHPSMRNLDRDGDGILLLRDITPPG APFIGERLLQAFRRSDRNGDGLLSRAESQVLPGLSHRFEHFDRNRDGYVSVQELMAMRQSLSPRRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16942; Mature: 16942
Theoretical pI: Translated: 11.32; Mature: 11.32
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKLLPLLLLLLAATTPALAQDPQAVQRHRQRMLELFHRLDHDNDGRLYLREAGLHPSM CCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH RNLDRDGDGILLLRDITPPGAPFIGERLLQAFRRSDRNGDGLLSRAESQVLPGLSHRFEH HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH FDRNRDGYVSVQELMAMRQSLSPRRPR HCCCCCCCEEHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHRKLLPLLLLLLAATTPALAQDPQAVQRHRQRMLELFHRLDHDNDGRLYLREAGLHPSM CCCHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHH RNLDRDGDGILLLRDITPPGAPFIGERLLQAFRRSDRNGDGLLSRAESQVLPGLSHRFEH HHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHH FDRNRDGYVSVQELMAMRQSLSPRRPR HCCCCCCCEEHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA